Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G124551 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 7.6e-189 663.7 336 100.0
Phvul.004G026300 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 5.6e-160 567.8 306 95.1
VMungo0464G0163 Vigna mungo HOM05D004959 ORTHO05D005961 1.1e-142 510.4 308 84.4
Glyma.13G054500 Glycine max HOM05D004959 ORTHO05D005961 8.0e-130 467.6 307 81.1
Glyma.19G032700 Glycine max HOM05D004959 ORTHO05D005961 3.5e-125 452.2 307 78.2
Potri.018G118800 Populus trichocarpa HOM05D004959 ORTHO05D005961 1.2e-45 188.0 317 36.0
Sabra18G0102400 Salix brachista HOM05D004959 ORTHO05D005961 9.0e-41 171.8 317 34.4
GSVIVG01032944001 Vitis vinifera HOM05D004959 ORTHO05D005961 2.0e-40 170.6 298 37.9
Cfa000659 Carpinus fangiana HOM05D004959 ORTHO05D005961 5.8e-40 169.1 308 37.7
Atru.chr8.666 Acer truncatum HOM05D004959 ORTHO05D005961 1.6e-37 161.0 306 35.0
Haze_06165 Corylus avellana HOM05D004959 ORTHO05D005961 1.3e-36 157.9 294 36.4
MD13G1224700 Malus domestica HOM05D004959 ORTHO05D005961 5.1e-36 156.0 291 38.1
QL04p014466 Quercus lobata HOM05D004959 ORTHO05D005961 6.7e-36 155.6 319 33.5
QL04p014830 Quercus lobata HOM05D004959 ORTHO05D005961 8.7e-36 155.2 319 33.9
CiPaw.10G061900 Carya illinoinensis HOM05D004959 ORTHO05D005961 4.8e-34 149.4 294 33.0
Ciclev10014195m.g Citrus clementina HOM05D004959 ORTHO05D005961 8.2e-34 148.7 315 34.3
RcHm_v2.0_Chr4g0396011 Rosa chinensis HOM05D004959 ORTHO05D005961 2.4e-33 147.1 309 34.0
Dinv06304 Davidia involucrata HOM05D004959 ORTHO05D005961 4.1e-33 146.4 319 35.7
Dinv04263 Davidia involucrata HOM05D004959 ORTHO05D005961 5.3e-33 146.0 318 35.5
Prupe.3G104300 Prunus persica HOM05D004959 ORTHO05D005961 5.3e-33 146.0 310 35.5
FAN22G0965 Fragaria x ananassa HOM05D004959 ORTHO05D005961 3.4e-32 143.3 309 34.0
COL.COLO4_18025 Corchorus olitorius HOM05D004959 ORTHO05D005961 1.0e-31 141.7 311 33.8
Manes.16G050600 Manihot esculenta HOM05D004959 ORTHO05D005961 1.3e-31 141.4 275 34.2
CANSAT25G2352 Cannabis sativa HOM05D004959 ORTHO05D005961 1.7e-31 141.0 296 33.1
Sed0018634 Sechium edule HOM05D004959 ORTHO05D005961 1.7e-31 141.0 289 36.3
Duzib248G0683 Durio zibethinus HOM05D004959 ORTHO05D005961 2.9e-31 140.2 319 33.9
MD16G1229900 Malus domestica HOM05D004959 ORTHO05D005961 2.9e-31 140.2 310 35.8
TAR622G1187 Trochodendron aralioides HOM05D004959 ORTHO05D005961 8.5e-31 138.7 296 34.1
Gohir.D12G047700 Gossypium hirsutum HOM05D004959 ORTHO05D005961 1.9e-30 137.5 318 34.3
Cpa.g.sc30.122 Carica papaya HOM05D004959 ORTHO05D005961 4.2e-30 136.3 287 33.4
TWI63G1138 Tripterygium wilfordii HOM05D004959 ORTHO05D005961 4.2e-30 136.3 274 33.6
Gorai.008G050400 Gossypium raimondii HOM05D004959 ORTHO05D005961 5.5e-30 136.0 318 34.0
FvH4_4g05080 Fragaria vesca HOM05D004959 ORTHO05D005961 7.2e-30 135.6 289 34.6
CsaV3_5G015760 Cucumis sativus L. HOM05D004959 ORTHO05D005961 9.4e-30 135.2 284 33.5
FAN12G3376 Fragaria x ananassa HOM05D004959 ORTHO05D005961 9.4e-30 135.2 289 34.6
Lj3A850G96 Lonicera japonica HOM05D004959 ORTHO05D005961 1.0e-28 131.7 302 33.8
Thecc.02G004800 Theobroma cacao HOM05D004959 ORTHO05D005961 1.0e-28 131.7 294 32.7
Gohir.A12G049000 Gossypium hirsutum HOM05D004959 ORTHO05D005961 1.8e-28 131.0 318 32.7
Aqoxy3G03508 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 3.0e-28 130.2 292 30.5
FAN17G1136 Fragaria x ananassa HOM05D004959 ORTHO05D005961 6.7e-28 129.0 310 33.2
MELO3C026444.2 Cucumis melo HOM05D004959 ORTHO05D005961 1.1e-27 128.3 314 30.9
AT4G20060 Arabidopsis thaliana HOM05D004959 ORTHO05D005961 2.0e-27 127.5 302 32.5
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 2.5e-27 127.1 295 33.2
Hma1.2p1_0286F.1_g114200 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 4.3e-27 126.3 281 34.2
AL7G33790 Arabidopsis lyrata HOM05D004959 ORTHO05D005961 7.4e-27 125.6 304 30.9
Nn3g21093 Nelumbo nucifera HOM05D004959 ORTHO05D005961 7.4e-27 125.6 285 31.6
Hma1.2p1_0137F.1_g062550 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 1.3e-26 124.8 281 34.2
Actinidia07601 Actinidia chinensis HOM05D004959 ORTHO05D005961 2.8e-26 123.6 290 33.8
Aqoxy5G03195 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 2.8e-26 123.6 292 29.8
CARHR226870 Cardamine hirsuta HOM05D004959 ORTHO05D005961 4.8e-26 122.9 314 30.3
Eucgr.I01567 Eucalyptus grandis HOM05D004959 ORTHO05D005961 1.1e-25 121.7 320 28.8
Oeu021359.1 Olea europaea HOM05D004959 ORTHO05D005961 1.1e-25 121.7 308 32.5
MBI07_g42017_MAGBIO Magnolia biondii HOM05D004959 ORTHO05D005961 1.4e-25 121.3 296 31.1
Rhsim01G0101500 Rhododendron simsii HOM05D004959 ORTHO05D005961 9.1e-25 118.6 309 33.0
Sp7g18520 Schrenkiella parvula HOM05D004959 ORTHO05D005961 1.2e-24 118.2 298 30.2
PGR142G3977 Punica granatum HOM05D004959 ORTHO05D005961 1.5e-24 117.9 322 29.5
BolC1t01373H Brassica oleracea HOM05D004959 ORTHO05D005961 2.0e-24 117.5 303 31.4
Rhsim02G0134800 Rhododendron simsii HOM05D004959 ORTHO05D005961 2.0e-24 117.5 309 32.4
Nitab4.5_0010326g0010 Nicotiana tabacum HOM05D004959 ORTHO05D005961 3.4e-24 116.7 283 30.7
BcaNung06192 Brassica carinata HOM05D004959 ORTHO05D005961 4.5e-24 116.3 301 29.6
Nitab4.5_0000036g0080 Nicotiana tabacum HOM05D004959 ORTHO05D005961 1.7e-23 114.4 283 30.7
Oeu021362.1 Olea europaea HOM05D004959 ORTHO05D005961 2.9e-23 113.6 275 32.7
Thhalv10024260m.g Eutrema salsugineum HOM05D004959 ORTHO05D005961 5.0e-23 112.8 279 29.4
Aa31LG6G2470 Aethionema arabicum HOM05D004959 ORTHO05D005961 6.5e-23 112.5 286 32.9
EL10Ac2g04300 Beta vulgaris HOM05D004959 ORTHO05D005961 6.5e-23 112.5 301 30.6
Peaxi162Scf00449g00320 Petunia axillaris HOM05D004959 ORTHO05D005961 8.5e-23 112.1 299 30.1
Cc04_g10880 Coffea canephora HOM05D004959 ORTHO05D005961 1.9e-22 110.9 265 33.6
C01p14060 Brassica napus HOM05D004959 ORTHO05D005961 3.2e-22 110.2 301 28.6
ECA233G2209 Erigeron canadensis HOM05D004959 ORTHO05D005961 3.2e-22 110.2 280 31.1
Migut.E00705 Erythranthe guttata HOM05D004959 ORTHO05D005961 3.2e-22 110.2 272 32.7
vmacro15931 Vaccinium macrocarpon HOM05D004959 ORTHO05D005961 5.5e-22 109.4 298 30.5
Solyc02g064590.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 1.2e-21 108.2 282 30.1
Solyc02g064620.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 1.2e-21 108.2 282 30.1
Carub.0007s2107 Capsella rubella HOM05D004959 ORTHO05D005961 1.6e-21 107.8 301 27.9
Sopen02g014720 Solanum pennellii HOM05D004959 ORTHO05D005961 1.6e-21 107.8 282 29.8
PGSC0003DMG400003329 Solanum tuberosum HOM05D004959 ORTHO05D005961 2.1e-21 107.5 283 29.7
Ah.09g226960 Amaranthus hybridus HOM05D004959 ORTHO05D005961 2.7e-21 107.1 300 29.7
AUR62012329 Chenopodium quinoa HOM05D004959 ORTHO05D005961 3.6e-21 106.7 282 29.1
A01p11860 Brassica napus HOM05D004959 ORTHO05D005961 4.7e-21 106.3 302 28.8
BraA01t01128Z Brassica rapa HOM05D004959 ORTHO05D005961 7.9e-21 105.5 302 28.8
DCAR_026905 Daucus carota HOM05D004959 ORTHO05D005961 1.0e-20 105.1 308 28.2
Sc10g0002790 Simmondsia chinensis HOM05D004959 ORTHO05D005961 1.8e-20 104.4 288 29.9
Migut.E00612 Erythranthe guttata HOM05D004959 ORTHO05D005961 5.1e-20 102.8 296 30.7
HanXRQChr12g0366411 Helianthus annuus HOM05D004959 ORTHO05D005961 5.1e-20 102.8 277 29.6
PSO017G0156 Papaver somniferum HOM05D004959 ORTHO05D005961 5.1e-20 102.8 300 29.0
PSO478G1937 Papaver somniferum HOM05D004959 ORTHO05D005961 5.1e-20 102.8 303 29.4
HanXRQChr04g0121291 Helianthus annuus HOM05D004959 ORTHO05D005961 1.1e-19 101.7 277 31.0
CSS0032692 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 3.3e-19 100.1 284 30.6
PSO161G0046 Papaver somniferum HOM05D004959 ORTHO05D005961 3.3e-19 100.1 302 29.5
AUR62022971 Chenopodium quinoa HOM05D004959 ORTHO05D005961 9.7e-19 98.6 283 27.9
Aqoxy7G01840 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 1.4e-17 94.7 272 29.8
ATR0037G053 Amborella trichopoda HOM05D004959 ORTHO05D005961 3.1e-17 93.6 286 30.1
SEGI_31831 Sequoiadendron giganteum HOM05D004959 ORTHO05D005961 4.1e-17 93.2 297 28.3
Lsat_1_v5_gn_8_33541 Lactuca sativa HOM05D004959 ORTHO05D005961 4.5e-16 89.7 290 29.3
HPP92_024644 Vanilla planifolia HOM05D004959 ORTHO05D005961 4.5e-16 89.7 278 27.7
SGA_v2.0_scaffold36G14263 Striga asiatica HOM05D004959 ORTHO05D005961 5.9e-16 89.4 292 28.4
SGA_v2.0_scaffold99G29470 Striga asiatica HOM05D004959 ORTHO05D005961 2.2e-15 87.4 292 28.4
SHI28141 Sapria himalayana HOM05D004959 ORTHO05D005961 3.6e-13 80.1 245 30.2
CDE04G1301 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 5.2e-12 76.3 252 30.2
Zm00001eb126950 Zea mays HOM05D004959 ORTHO05D005961 1.4e-09 68.2 285 25.3
AagrBONN_evm.TU.Sc2ySwM_228.5373 Anthoceros agrestis HOM05D004959 ORTHO05D005961 4.1e-09 66.6 300 28.3
SMO111G0127 Selaginella moellendorffii HOM05D004959 ORTHO05D005961 2.9e-07 60.5 311 27.0
Mapoly0306s0002 Marchantia polymorpha HOM05D004959 ORTHO05D005961 3.8e-07 60.1 265 24.5
Pp3c21_2460 Physcomitrium patens HOM05D004959 ORTHO05D005961 2.5e-06 57.4 291 25.4


User provided reference genes

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