Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G124501 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 5.9e-197 690.6 345 100.0
Phvul.004G026300 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 3.7e-167 591.7 329 91.5
VMungo0464G0163 Vigna mungo HOM05D004959 ORTHO05D005961 2.4e-153 545.8 332 82.8
Glyma.13G054500 Glycine max HOM05D004959 ORTHO05D005961 7.2e-126 454.5 335 71.0
Glyma.19G032700 Glycine max HOM05D004959 ORTHO05D005961 6.1e-125 451.4 329 72.6
Prupe.3G104300 Prunus persica HOM05D004959 ORTHO05D005961 5.4e-49 199.1 306 39.2
Cfa000659 Carpinus fangiana HOM05D004959 ORTHO05D005961 3.9e-47 193.0 308 39.9
Ciclev10014195m.g Citrus clementina HOM05D004959 ORTHO05D005961 3.6e-45 186.4 307 36.5
MD13G1224700 Malus domestica HOM05D004959 ORTHO05D005961 3.1e-44 183.3 306 35.3
Thecc.02G004800 Theobroma cacao HOM05D004959 ORTHO05D005961 5.8e-43 179.1 290 37.6
QL04p014466 Quercus lobata HOM05D004959 ORTHO05D005961 9.9e-43 178.3 307 36.8
QL04p014830 Quercus lobata HOM05D004959 ORTHO05D005961 9.9e-43 178.3 307 36.8
Atru.chr8.666 Acer truncatum HOM05D004959 ORTHO05D005961 4.9e-42 176.0 308 35.7
CiPaw.10G061900 Carya illinoinensis HOM05D004959 ORTHO05D005961 6.4e-42 175.6 304 36.2
GSVIVG01032944001 Vitis vinifera HOM05D004959 ORTHO05D005961 1.4e-41 174.5 307 34.5
Duzib248G0683 Durio zibethinus HOM05D004959 ORTHO05D005961 4.2e-41 172.9 291 38.5
RcHm_v2.0_Chr4g0396011 Rosa chinensis HOM05D004959 ORTHO05D005961 7.1e-41 172.2 304 34.5
Manes.16G050600 Manihot esculenta HOM05D004959 ORTHO05D005961 2.1e-40 170.6 304 34.5
TAR622G1187 Trochodendron aralioides HOM05D004959 ORTHO05D005961 2.3e-39 167.2 304 36.5
FAN12G3376 Fragaria x ananassa HOM05D004959 ORTHO05D005961 9.6e-38 161.8 306 34.0
FvH4_4g05080 Fragaria vesca HOM05D004959 ORTHO05D005961 4.8e-37 159.5 305 33.8
Haze_06165 Corylus avellana HOM05D004959 ORTHO05D005961 4.5e-35 152.9 312 35.9
MD16G1229900 Malus domestica HOM05D004959 ORTHO05D005961 4.5e-35 152.9 300 32.7
Gohir.A12G049000 Gossypium hirsutum HOM05D004959 ORTHO05D005961 1.3e-34 151.4 292 35.3
Gorai.008G050400 Gossypium raimondii HOM05D004959 ORTHO05D005961 4.9e-34 149.4 292 34.2
Gohir.D12G047700 Gossypium hirsutum HOM05D004959 ORTHO05D005961 1.4e-33 147.9 292 33.9
Potri.018G118800 Populus trichocarpa HOM05D004959 ORTHO05D005961 1.4e-33 147.9 310 33.2
TWI63G1138 Tripterygium wilfordii HOM05D004959 ORTHO05D005961 1.9e-33 147.5 292 34.2
Sabra18G0102400 Salix brachista HOM05D004959 ORTHO05D005961 3.2e-33 146.7 318 33.6
CANSAT25G2352 Cannabis sativa HOM05D004959 ORTHO05D005961 1.6e-32 144.4 330 31.8
PGR142G3977 Punica granatum HOM05D004959 ORTHO05D005961 4.6e-32 142.9 300 31.0
Dinv04263 Davidia involucrata HOM05D004959 ORTHO05D005961 3.0e-31 140.2 297 34.3
Dinv06304 Davidia involucrata HOM05D004959 ORTHO05D005961 6.7e-31 139.0 296 34.1
CARHR226870 Cardamine hirsuta HOM05D004959 ORTHO05D005961 1.5e-30 137.9 302 32.1
Cpa.g.sc30.122 Carica papaya HOM05D004959 ORTHO05D005961 1.3e-29 134.8 303 32.0
Sed0018634 Sechium edule HOM05D004959 ORTHO05D005961 1.6e-29 134.4 288 30.9
COL.COLO4_18025 Corchorus olitorius HOM05D004959 ORTHO05D005961 2.8e-29 133.7 316 32.0
FAN22G0965 Fragaria x ananassa HOM05D004959 ORTHO05D005961 4.8e-29 132.9 264 32.6
Carub.0007s2107 Capsella rubella HOM05D004959 ORTHO05D005961 1.1e-28 131.7 287 30.3
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 1.1e-28 131.7 287 30.3
AL7G33790 Arabidopsis lyrata HOM05D004959 ORTHO05D005961 1.4e-28 131.3 306 29.7
AT4G20060 Arabidopsis thaliana HOM05D004959 ORTHO05D005961 2.4e-28 130.6 305 29.8
Hma1.2p1_0137F.1_g062550 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 5.3e-28 129.4 288 32.6
Rhsim01G0101500 Rhododendron simsii HOM05D004959 ORTHO05D005961 2.0e-27 127.5 305 31.5
Nn3g21093 Nelumbo nucifera HOM05D004959 ORTHO05D005961 2.2e-26 124.0 292 32.2
Actinidia07601 Actinidia chinensis HOM05D004959 ORTHO05D005961 3.8e-26 123.2 292 30.5
Sp7g18520 Schrenkiella parvula HOM05D004959 ORTHO05D005961 6.4e-26 122.5 293 28.7
Aa31LG6G2470 Aethionema arabicum HOM05D004959 ORTHO05D005961 1.1e-25 121.7 293 29.4
Eucgr.I01567 Eucalyptus grandis HOM05D004959 ORTHO05D005961 1.9e-25 120.9 303 29.4
SHI28141 Sapria himalayana HOM05D004959 ORTHO05D005961 3.2e-25 120.2 297 31.6
C01p14060 Brassica napus HOM05D004959 ORTHO05D005961 9.3e-25 118.6 286 28.0
BolC1t01373H Brassica oleracea HOM05D004959 ORTHO05D005961 9.3e-25 118.6 290 27.2
Rhsim02G0134800 Rhododendron simsii HOM05D004959 ORTHO05D005961 9.3e-25 118.6 296 30.1
Thhalv10024260m.g Eutrema salsugineum HOM05D004959 ORTHO05D005961 2.7e-24 117.1 297 29.3
Oeu021359.1 Olea europaea HOM05D004959 ORTHO05D005961 6.0e-24 115.9 295 31.5
CSS0032692 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 7.9e-24 115.5 295 29.8
SGA_v2.0_scaffold36G14263 Striga asiatica HOM05D004959 ORTHO05D005961 1.0e-23 115.2 303 28.7
BcaNung06192 Brassica carinata HOM05D004959 ORTHO05D005961 1.8e-23 114.4 290 27.2
BraA01t01128Z Brassica rapa HOM05D004959 ORTHO05D005961 1.8e-23 114.4 291 27.8
AUR62012329 Chenopodium quinoa HOM05D004959 ORTHO05D005961 1.8e-23 114.4 290 28.3
A01p11860 Brassica napus HOM05D004959 ORTHO05D005961 2.3e-23 114.0 291 27.5
EL10Ac2g04300 Beta vulgaris HOM05D004959 ORTHO05D005961 3.0e-23 113.6 292 27.4
SGA_v2.0_scaffold99G29470 Striga asiatica HOM05D004959 ORTHO05D005961 5.1e-23 112.8 303 28.4
Cc04_g10880 Coffea canephora HOM05D004959 ORTHO05D005961 8.7e-23 112.1 297 27.3
Migut.E00612 Erythranthe guttata HOM05D004959 ORTHO05D005961 8.7e-23 112.1 326 28.8
Migut.E00705 Erythranthe guttata HOM05D004959 ORTHO05D005961 7.4e-22 109.0 326 28.2
MELO3C026444.2 Cucumis melo HOM05D004959 ORTHO05D005961 9.6e-22 108.6 287 28.2
CsaV3_5G015760 Cucumis sativus L. HOM05D004959 ORTHO05D005961 1.3e-21 108.2 287 27.2
FAN17G1136 Fragaria x ananassa HOM05D004959 ORTHO05D005961 1.6e-21 107.8 336 28.6
Ah.09g226960 Amaranthus hybridus HOM05D004959 ORTHO05D005961 2.8e-21 107.1 287 28.6
AUR62022971 Chenopodium quinoa HOM05D004959 ORTHO05D005961 3.7e-21 106.7 293 27.6
Sc10g0002790 Simmondsia chinensis HOM05D004959 ORTHO05D005961 3.7e-21 106.7 291 27.1
ECA233G2209 Erigeron canadensis HOM05D004959 ORTHO05D005961 2.4e-20 104.0 301 26.2
vmacro15931 Vaccinium macrocarpon HOM05D004959 ORTHO05D005961 2.4e-20 104.0 323 26.3
PSO478G1937 Papaver somniferum HOM05D004959 ORTHO05D005961 1.2e-19 101.7 311 29.6
PSO161G0046 Papaver somniferum HOM05D004959 ORTHO05D005961 1.5e-19 101.3 310 28.4
Aqoxy5G03195 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 2.0e-19 100.9 334 25.1
HanXRQChr04g0121291 Helianthus annuus HOM05D004959 ORTHO05D005961 4.5e-19 99.8 286 26.2
Lsat_1_v5_gn_8_33541 Lactuca sativa HOM05D004959 ORTHO05D005961 5.8e-19 99.4 287 30.3
Aqoxy3G03508 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 1.3e-18 98.2 304 25.3
PSO017G0156 Papaver somniferum HOM05D004959 ORTHO05D005961 1.3e-18 98.2 304 28.0
Aqoxy7G01840 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 1.7e-18 97.8 303 25.7
Nitab4.5_0000036g0080 Nicotiana tabacum HOM05D004959 ORTHO05D005961 6.5e-18 95.9 299 27.1
PGSC0003DMG400003329 Solanum tuberosum HOM05D004959 ORTHO05D005961 8.4e-18 95.5 295 28.1
Sopen02g014720 Solanum pennellii HOM05D004959 ORTHO05D005961 1.1e-17 95.1 295 28.8
Nitab4.5_0010326g0010 Nicotiana tabacum HOM05D004959 ORTHO05D005961 5.5e-17 92.8 299 26.4
MBI07_g42017_MAGBIO Magnolia biondii HOM05D004959 ORTHO05D005961 1.6e-16 91.3 341 25.5
HanXRQChr12g0366411 Helianthus annuus HOM05D004959 ORTHO05D005961 1.1e-14 85.1 286 25.9
Lj3A850G96 Lonicera japonica HOM05D004959 ORTHO05D005961 7.4e-14 82.4 228 29.8


User provided reference genes

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