Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G124450 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 1.1e-98 363.2 179 100.0
Phvul.004G026300 Phaseolus vulgaris HOM05D004959 ORTHO05D005961 1.4e-88 329.7 174 94.8
VMungo0464G0163 Vigna mungo HOM05D004959 ORTHO05D005961 2.0e-87 325.9 174 94.3
Glyma.19G032700 Glycine max HOM05D004959 ORTHO05D005961 9.9e-79 297.0 174 84.5
Lalb_Chr19g0135221 Lupinus albus HOM05D004959 ORTHO05D005961 5.4e-69 264.6 174 77.0
LjContig00564g0005645 Lotus japonicus HOM05D004959 ORTHO05D005961 1.0e-67 260.4 176 75.0
LjContig00564g0005363 Lotus japonicus HOM05D004959 ORTHO05D005961 3.9e-67 258.5 174 75.3
Psat7g167160 Pisum sativum HOM05D004959 ORTHO05D005961 3.9e-67 258.5 174 75.9
Lj3g0004583 Lotus japonicus HOM05D004959 ORTHO05D005961 5.1e-67 258.1 176 74.4
LjContig00564g0002415 Lotus japonicus HOM05D004959 ORTHO05D005961 6.7e-67 257.7 176 74.4
Ca_18944_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 1.9e-66 256.1 174 75.9
Medtr4g078330 Medicago truncatula HOM05D004959 ORTHO05D005961 2.5e-66 255.8 174 75.3
TPR.G23000 Trifolium pratense HOM05D004959 ORTHO05D005961 1.6e-57 226.5 167 71.9
QL04p014466 Quercus lobata HOM05D004959 ORTHO05D005961 6.9e-56 221.1 175 65.1
QL04p014830 Quercus lobata HOM05D004959 ORTHO05D005961 6.9e-56 221.1 175 65.1
arahy.Tifrunner.gnm1.ann1.WXF40H Arachis hypogaea HOM05D004959 ORTHO05D005961 1.2e-55 220.3 173 64.2
Cfa000659 Carpinus fangiana HOM05D004959 ORTHO05D005961 1.5e-55 219.9 175 64.6
TWI63G1138 Tripterygium wilfordii HOM05D004959 ORTHO05D005961 2.6e-55 219.2 171 64.9
arahy.Tifrunner.gnm1.ann1.C6XSUD Arachis hypogaea HOM05D004959 ORTHO05D005961 2.2e-54 216.1 172 63.4
Dinv04263 Davidia involucrata HOM05D004959 ORTHO05D005961 4.2e-53 211.8 174 62.1
Dinv06304 Davidia involucrata HOM05D004959 ORTHO05D005961 5.5e-53 211.5 174 62.1
Atru.chr8.667 Acer truncatum HOM05D004959 ORTHO05D005961 4.6e-52 208.4 175 62.9
Manes.16G050600 Manihot esculenta HOM05D004959 ORTHO05D005961 2.3e-51 206.1 175 62.9
Sabra18G0102400 Salix brachista HOM05D004959 ORTHO05D005961 3.0e-51 205.7 172 61.6
Nn3g21093 Nelumbo nucifera HOM05D004959 ORTHO05D005961 7.4e-50 201.1 174 59.8
PSO478G1937 Papaver somniferum HOM05D004959 ORTHO05D005961 7.4e-50 201.1 174 56.9
PSO478G4754 Papaver somniferum HOM05D004959 ORTHO05D005961 7.4e-50 201.1 174 56.9
Thecc.02G004800 Theobroma cacao HOM05D004959 ORTHO05D005961 7.4e-50 201.1 175 58.3
Cpa.g.sc30.122 Carica papaya HOM05D004959 ORTHO05D005961 9.7e-50 200.7 175 58.9
Potri.018G118800 Populus trichocarpa HOM05D004959 ORTHO05D005961 1.3e-49 200.3 172 59.9
ClCG09G011850 Citrullus lanatus HOM05D004959 ORTHO05D005961 1.6e-49 199.9 171 61.4
Gohir.D12G047700 Gossypium hirsutum HOM05D004959 ORTHO05D005961 2.2e-49 199.5 175 58.9
PSO017G0156 Papaver somniferum HOM05D004959 ORTHO05D005961 3.7e-49 198.7 174 56.9
GSVIVG01032944001 Vitis vinifera HOM05D004959 ORTHO05D005961 3.7e-49 198.7 176 62.5
Lsat_1_v5_gn_8_33541 Lactuca sativa HOM05D004959 ORTHO05D005961 1.1e-48 197.2 175 58.9
HanXRQChr12g0366411 Helianthus annuus HOM05D004959 ORTHO05D005961 4.1e-48 195.3 175 57.1
CiPaw.10G061900 Carya illinoinensis HOM05D004959 ORTHO05D005961 5.3e-48 194.9 175 58.9
CsaV3_5G015760 Cucumis sativus L. HOM05D004959 ORTHO05D005961 5.3e-48 194.9 171 60.2
CSS0018526 Camellia sinensis var. sinensis HOM05D004959 ORTHO05D005961 3.4e-47 192.2 169 60.4
Lj3A850G96 Lonicera japonica HOM05D004959 ORTHO05D005961 3.4e-47 192.2 172 57.6
MBI07_g42017_MAGBIO Magnolia biondii HOM05D004959 ORTHO05D005961 3.4e-47 192.2 174 57.5
Sed0018634 Sechium edule HOM05D004959 ORTHO05D005961 3.4e-47 192.2 171 58.5
BcaNung06192 Brassica carinata HOM05D004959 ORTHO05D005961 5.9e-47 191.4 175 56.6
vmacro15931 Vaccinium macrocarpon HOM05D004959 ORTHO05D005961 1.0e-46 190.7 169 60.9
COL.COLO4_18025 Corchorus olitorius HOM05D004959 ORTHO05D005961 1.7e-46 189.9 171 59.1
Hma1.2p1_0137F.1_g062550 Hydrangea macrophylla HOM05D004959 ORTHO05D005961 1.7e-46 189.9 171 57.9
ECA233G2209 Erigeron canadensis HOM05D004959 ORTHO05D005961 2.2e-46 189.5 177 55.9
PGR142G3977 Punica granatum HOM05D004959 ORTHO05D005961 2.2e-46 189.5 175 57.7
AT4G20060 Arabidopsis thaliana HOM05D004959 ORTHO05D005961 2.9e-46 189.1 175 57.1
A01p11860 Brassica napus HOM05D004959 ORTHO05D005961 5.0e-46 188.3 175 56.0
BraA01t01128Z Brassica rapa HOM05D004959 ORTHO05D005961 5.0e-46 188.3 175 56.6
Gorai.008G050400 Gossypium raimondii HOM05D004959 ORTHO05D005961 6.5e-46 188.0 208 50.5
MELO3C026444.2 Cucumis melo HOM05D004959 ORTHO05D005961 1.1e-45 187.2 171 58.5
Rhsim02G0134800 Rhododendron simsii HOM05D004959 ORTHO05D005961 1.1e-45 187.2 169 59.2
SHI28139 Sapria himalayana HOM05D004959 ORTHO05D005961 1.1e-45 187.2 175 55.4
Carub.0007s2107 Capsella rubella HOM05D004959 ORTHO05D005961 1.4e-45 186.8 175 56.0
Thhalv10024260m.g Eutrema salsugineum HOM05D004959 ORTHO05D005961 1.4e-45 186.8 175 55.4
Rhsim01G0101500 Rhododendron simsii HOM05D004959 ORTHO05D005961 2.5e-45 186.0 169 59.2
Solyc02g064590.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 2.5e-45 186.0 176 54.0
Solyc02g064620.2 Solanum lycopersicum HOM05D004959 ORTHO05D005961 2.5e-45 186.0 176 54.0
Sopen02g014720 Solanum pennellii HOM05D004959 ORTHO05D005961 2.5e-45 186.0 176 54.0
Actinidia07601 Actinidia chinensis HOM05D004959 ORTHO05D005961 3.2e-45 185.7 170 57.6
AL7G33790 Arabidopsis lyrata HOM05D004959 ORTHO05D005961 3.2e-45 185.7 175 56.0
Gohir.A12G049000 Gossypium hirsutum HOM05D004959 ORTHO05D005961 3.2e-45 185.7 208 50.0
BolC1t01373H Brassica oleracea HOM05D004959 ORTHO05D005961 7.2e-45 184.5 175 55.4
Prupe.3G104300 Prunus persica HOM05D004959 ORTHO05D005961 1.2e-44 183.7 174 55.7
C01p14060 Brassica napus HOM05D004959 ORTHO05D005961 1.6e-44 183.3 175 55.4
Aqoxy3G03508 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 2.1e-44 183.0 174 54.0
CANSAT25G2352 Cannabis sativa HOM05D004959 ORTHO05D005961 2.7e-44 182.6 171 57.3
Sp7g18520 Schrenkiella parvula HOM05D004959 ORTHO05D005961 2.7e-44 182.6 175 53.7
CDE04G0396 Ceratophyllum demersum HOM05D004959 ORTHO05D005961 3.6e-44 182.2 169 57.4
Cc04_g10880 Coffea canephora HOM05D004959 ORTHO05D005961 3.6e-44 182.2 170 54.7
PGSC0003DMG400003329 Solanum tuberosum HOM05D004959 ORTHO05D005961 6.1e-44 181.4 176 53.4
Eucgr.I01567 Eucalyptus grandis HOM05D004959 ORTHO05D005961 7.9e-44 181.0 177 55.4
ATR0037G053 Amborella trichopoda HOM05D004959 ORTHO05D005961 1.4e-43 180.3 174 54.6
HPP92_024644 Vanilla planifolia HOM05D004959 ORTHO05D005961 1.4e-43 180.3 174 52.3
BcaNung06193 Brassica carinata HOM05D004959 ORTHO05D005961 2.3e-43 179.5 180 53.9
CARHR226870 Cardamine hirsuta HOM05D004959 ORTHO05D005961 3.0e-43 179.1 175 53.7
Aqoxy7G01840 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 3.9e-43 178.7 174 52.3
Aqoxy5G03195 Aquilegia oxysepala HOM05D004959 ORTHO05D005961 5.1e-43 178.3 174 52.3
Aa31LG6G2470 Aethionema arabicum HOM05D004959 ORTHO05D005961 1.1e-42 177.2 175 51.4
Peaxi162Scf00449g00321 Petunia axillaris HOM05D004959 ORTHO05D005961 1.7e-41 173.3 172 52.3
Nitab4.5_0000036g0080 Nicotiana tabacum HOM05D004959 ORTHO05D005961 2.8e-41 172.6 173 51.4
Sc10g0002790 Simmondsia chinensis HOM05D004959 ORTHO05D005961 2.8e-41 172.6 174 51.7
RcHm_v2.0_Chr4g0396011 Rosa chinensis HOM05D004959 ORTHO05D005961 1.1e-40 170.6 174 51.1
CAN.G370.71 Capsicum annuum HOM05D004959 ORTHO05D005961 3.1e-40 169.1 176 50.0
FAN17G1136 Fragaria x ananassa HOM05D004959 ORTHO05D005961 4.1e-40 168.7 174 50.6
MD13G1224700 Malus domestica HOM05D004959 ORTHO05D005961 1.2e-39 167.2 167 52.7
FAN22G0965 Fragaria x ananassa HOM05D004959 ORTHO05D005961 1.5e-39 166.8 174 50.0
FAN12G3376 Fragaria x ananassa HOM05D004959 ORTHO05D005961 4.5e-39 165.2 174 49.4
EL10Ac2g04300 Beta vulgaris HOM05D004959 ORTHO05D005961 7.7e-39 164.5 174 51.7
FvH4_4g05080 Fragaria vesca HOM05D004959 ORTHO05D005961 1.3e-38 163.7 174 48.9
Migut.E00705 Erythranthe guttata HOM05D004959 ORTHO05D005961 2.2e-38 162.9 170 48.8
Migut.E00612 Erythranthe guttata HOM05D004959 ORTHO05D005961 6.5e-38 161.4 170 48.8
DCAR_026905 Daucus carota HOM05D004959 ORTHO05D005961 3.2e-37 159.1 169 50.9
SGA_v2.0_scaffold99G29470 Striga asiatica HOM05D004959 ORTHO05D005961 1.6e-36 156.8 169 49.1
BcaB03g11657 Brassica carinata HOM05D004959 ORTHO05D005961 2.1e-36 156.4 147 55.1
AUR62022971 Chenopodium quinoa HOM05D004959 ORTHO05D005961 2.7e-36 156.0 174 50.0
Ah.09g226960 Amaranthus hybridus HOM05D004959 ORTHO05D005961 4.7e-36 155.2 174 50.0
SGA_v2.0_scaffold36G14263 Striga asiatica HOM05D004959 ORTHO05D005961 6.1e-36 154.8 169 49.7
Nitab4.5_0010326g0010 Nicotiana tabacum HOM05D004959 ORTHO05D005961 1.4e-35 153.7 147 51.7
AUR62012329 Chenopodium quinoa HOM05D004959 ORTHO05D005961 2.3e-35 152.9 174 50.0
SEGI_31831 Sequoiadendron giganteum HOM05D004959 ORTHO05D005961 2.3e-35 152.9 175 46.3
HanXRQChr04g0121291 Helianthus annuus HOM05D004959 ORTHO05D005961 1.1e-34 150.6 121 60.3
unitig_46.g18488 Utricularia gibba HOM05D004959 ORTHO05D005961 7.7e-31 137.9 168 42.3
Ca_14573_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 2.9e-30 136.0 114 63.2
Pp3c21_2460 Physcomitrium patens HOM05D004959 ORTHO05D005961 5.0e-30 135.2 168 40.5
Oeu021359.1 Olea europaea HOM05D004959 ORTHO05D005961 8.5e-30 134.4 166 41.6
Ca_14572_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 1.5e-29 133.7 115 61.7
MD16G1229900 Malus domestica HOM05D004959 ORTHO05D005961 2.7e-28 129.4 174 42.0
Mapoly0306s0002 Marchantia polymorpha HOM05D004959 ORTHO05D005961 8.0e-28 127.9 198 36.4
AagrBONN_evm.TU.Sc2ySwM_228.5373 Anthoceros agrestis HOM05D004959 ORTHO05D005961 1.8e-27 126.7 171 39.2
SMO111G0127 Selaginella moellendorffii HOM05D004959 ORTHO05D005961 2.8e-25 119.4 167 38.3
Zm00001eb126950 Zea mays HOM05D004959 ORTHO05D005961 1.8e-24 116.7 174 37.4
Ca_14567_v3 Cicer arietinum L. HOM05D004959 ORTHO05D005961 2.0e-23 113.2 96 63.5
Duzib248G0683 Durio zibethinus HOM05D004959 ORTHO05D005961 5.0e-22 108.6 91 59.3
CBR_g16049 Chara braunii HOM05D004959 ORTHO05D005961 8.8e-19 97.8 190 32.6
Os01g0188200 Oryza sativa ssp. japonica HOM05D004959 ORTHO05D005961 1.8e-16 90.1 165 33.9
Haze_06165 Corylus avellana HOM05D004959 ORTHO05D005961 9.4e-13 77.8 45 80.0
Psat2g088000 Pisum sativum HOM05D004959 ORTHO05D005961 3.4e-10 69.3 97 44.3


User provided reference genes

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