Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 5.7e-150 535.0 473 100.0
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 6.4e-101 372.1 493 74.2
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 4.0e-95 352.8 478 74.1
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 6.4e-85 318.9 475 72.4
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 6.5e-69 265.8 474 60.5
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 3.5e-67 260.0 486 60.5
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 3.0e-66 256.9 474 62.9
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 1.4e-63 248.1 487 62.6
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 1.0e-53 215.3 478 54.0
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 2.0e-49 201.1 471 62.0
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 2.2e-48 197.6 491 60.9
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 1.7e-45 188.0 499 51.1
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 5.5e-28 129.8 507 53.1
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 9.8e-25 119.0 500 48.4
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 6.3e-24 116.3 475 54.9
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 2.0e-22 111.3 502 40.8
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 5.9e-22 109.8 491 47.5
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.8e-21 107.1 482 53.1
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 6.6e-21 106.3 479 48.2
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 1.9e-20 104.8 491 36.7
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 9.5e-20 102.4 481 52.8
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 3.6e-19 100.5 497 46.1
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 4.0e-18 97.1 481 52.4
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 4.4e-17 93.6 242 35.1
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 1.3e-16 92.0 561 47.2
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 1.3e-16 92.0 482 50.4
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 2.8e-16 90.9 497 42.3
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 4.9e-16 90.1 501 46.5
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 6.3e-16 89.7 246 36.2
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 2.4e-15 87.8 498 51.0
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 3.1e-15 87.4 485 42.3
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 4.1e-15 87.0 242 33.5
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 7.0e-15 86.3 528 30.9
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 7.0e-15 86.3 479 50.9
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 5.9e-14 83.2 247 28.7
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 2.9e-13 80.9 253 33.2
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 5.0e-13 80.1 495 35.2
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 6.6e-13 79.7 481 51.1
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 1.5e-12 78.6 374 25.9
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 3.3e-12 77.4 491 46.4
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 2.1e-11 74.7 234 29.9
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 2.1e-11 74.7 253 31.2
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 2.8e-11 74.3 484 47.1
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 4.7e-11 73.6 240 30.4
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 4.7e-11 73.6 241 29.5
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 1.0e-10 72.4 249 29.3
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 1.0e-10 72.4 477 40.5
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 1.4e-10 72.0 475 42.1
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 2.3e-10 71.2 247 27.9
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 2.3e-10 71.2 247 27.9
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 5.8e-09 66.6 224 32.6
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 5.8e-09 66.6 497 47.1
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 5.8e-09 66.6 488 49.2
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 9.8e-09 65.9 476 50.2
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 9.8e-09 65.9 53 58.5
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 9.8e-09 65.9 518 44.8
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 2.9e-08 64.3 238 29.0
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 3.7e-08 63.9 238 30.3
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 4.9e-08 63.5 53 56.6
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.4e-07 62.0 51 58.8
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 1.9e-07 61.6 53 56.6
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 1.9e-07 61.6 51 60.8
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 3.2e-07 60.8 499 45.7
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 7.0e-07 59.7 513 48.7
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 7.0e-07 59.7 53 54.7
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 9.2e-07 59.3 525 44.2
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 1.2e-06 58.9 479 37.0
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 1.2e-06 58.9 343 45.8
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 1.2e-06 58.9 517 44.9
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 1.6e-06 58.5 51 58.8
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 2.0e-06 58.2 481 33.9
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 2.0e-06 58.2 255 29.8
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 2.0e-06 58.2 254 29.5
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 2.7e-06 57.8 481 44.7
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 2.7e-06 57.8 484 39.9
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 3.5e-06 57.4 253 30.4
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 4.6e-06 57.0 53 50.9
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 6.0e-06 56.6 491 42.8


User provided reference genes

Program Settings