Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 4.6e-79 297.7 142 100.0
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 1.0e-78 296.6 142 99.3
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 5.1e-78 294.3 142 98.6
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 2.2e-73 278.9 144 93.1
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 3.2e-72 275.0 144 91.0
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 2.8e-68 261.9 140 89.3
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 1.8e-67 259.2 141 86.5
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 9.0e-67 256.9 141 85.8
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 1.2e-66 256.5 142 84.5
Ca_14717_v3 Cicer arietinum L. HOM05D006458 ORTHO05D008433 7.6e-66 253.8 144 84.7
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 1.3e-65 253.1 143 83.9
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 2.9e-65 251.9 147 79.6
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 6.5e-65 250.8 146 81.5
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 6.5e-65 250.8 144 81.9
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 3.2e-64 248.4 145 80.7
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 7.1e-64 247.3 142 80.3
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 9.3e-64 246.9 137 84.7
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 6.0e-63 244.2 140 81.4
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 7.9e-63 243.8 141 79.4
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 1.3e-62 243.0 146 77.4
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 5.1e-62 241.1 142 77.5
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 5.1e-62 241.1 141 81.6
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 6.7e-62 240.7 133 81.2
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 8.7e-62 240.4 142 76.8
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 1.1e-61 240.0 131 82.4
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 1.1e-61 240.0 143 77.6
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 1.9e-61 239.2 137 78.1
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 1.9e-61 239.2 136 80.1
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.9e-61 239.2 136 80.1
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 1.9e-61 239.2 135 81.5
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 1.9e-61 239.2 143 77.6
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 1.9e-61 239.2 141 78.7
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 2.5e-61 238.8 133 80.5
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 3.3e-61 238.4 141 79.4
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 4.3e-61 238.0 127 83.5
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 5.7e-61 237.7 142 78.2
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 5.7e-61 237.7 146 77.4
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 9.7e-61 236.9 138 79.0
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 9.7e-61 236.9 138 79.0
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 9.7e-61 236.9 132 82.6
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 1.3e-60 236.5 136 81.6
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 1.3e-60 236.5 133 82.0
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 1.6e-60 236.1 137 81.0
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 2.8e-60 235.3 133 81.2
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 6.3e-60 234.2 138 78.3
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 6.3e-60 234.2 136 79.4
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 6.3e-60 234.2 143 76.2
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 8.2e-60 233.8 138 78.3
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 1.1e-59 233.4 126 83.3
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 1.4e-59 233.0 133 80.5
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 1.4e-59 233.0 140 77.9
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.8e-59 232.6 132 80.3
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 2.4e-59 232.3 130 80.0
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 5.3e-59 231.1 129 79.1
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 6.9e-59 230.7 134 79.9
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 1.2e-58 229.9 133 78.2
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 1.5e-58 229.6 138 73.9
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 1.5e-58 229.6 132 78.0
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 3.4e-58 228.4 124 82.3
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 3.4e-58 228.4 138 73.2
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 5.9e-58 227.6 140 73.6
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 7.6e-58 227.3 131 76.3
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 2.2e-57 225.7 143 74.8
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 2.2e-57 225.7 142 73.9
MBI18_g24806_MAGBIO Magnolia biondii HOM05D006458 ORTHO05D008433 2.9e-57 225.3 146 73.3
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 2.9e-57 225.3 137 75.9
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 6.5e-57 224.2 138 72.5
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 1.4e-56 223.0 139 75.5
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 2.5e-56 222.2 142 72.5
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 2.5e-56 222.2 142 71.8
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 3.2e-56 221.9 130 77.7
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 5.5e-56 221.1 139 71.2
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 7.2e-56 220.7 147 67.3
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 7.2e-56 220.7 142 71.8
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 1.2e-55 219.9 137 73.0
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 1.2e-55 219.9 139 70.5
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 1.2e-55 219.9 138 72.5
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 3.6e-55 218.4 142 66.9
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 6.1e-55 217.6 142 67.6
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 6.1e-55 217.6 142 66.9
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 1.3e-54 216.5 173 61.8
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 1.8e-54 216.1 125 77.6
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.3e-54 215.7 159 64.8
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 2.3e-54 215.7 140 70.0
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 5.1e-54 214.5 138 71.0
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 8.7e-54 213.8 140 70.0
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 1.5e-53 213.0 123 74.8
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 1.9e-53 212.6 135 71.9
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 2.5e-53 212.2 142 68.3
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 3.3e-53 211.8 138 69.6
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 3.3e-53 211.8 136 72.1
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 3.3e-53 211.8 132 72.0
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 3.3e-53 211.8 132 72.0
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 4.3e-53 211.5 140 69.3
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 5.7e-53 211.1 138 69.6
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 5.7e-53 211.1 140 69.3
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 9.7e-53 210.3 138 68.8
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 1.6e-52 209.5 140 68.6
Ah.04g165770 Amaranthus hybridus HOM05D006458 ORTHO05D008433 6.3e-52 207.6 132 71.2
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 1.1e-51 206.8 141 68.1
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 1.4e-51 206.5 131 68.7
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 6.9e-51 204.1 121 71.1
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 1.5e-50 203.0 197 53.3
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 2.0e-50 202.6 134 65.7
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 1.7e-49 199.5 130 69.2
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 8.5e-49 197.2 133 65.4
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 1.9e-48 196.1 112 80.4
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 3.2e-48 195.3 132 70.5
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 9.4e-48 193.7 173 59.5
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 5.9e-42 174.5 100 81.0
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 1.7e-41 172.9 134 61.2
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 2.9e-41 172.2 95 82.1
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 3.8e-41 171.8 93 81.7
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 1.4e-40 169.9 95 80.0
Atru.chr2.3327 Acer truncatum HOM05D006458 ORTHO05D008433 2.3e-38 162.5 95 81.1
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 2.6e-34 149.1 96 69.8
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 2.2e-33 146.0 107 64.5
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 4.0e-22 108.6 110 54.5
Atru.chr2.3388 Acer truncatum HOM05D006458 ORTHO05D008433 2.9e-17 92.4 63 69.8
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.4e-14 83.6 43 81.4
TPR.G13209 Trifolium pratense HOM05D006458 ORTHO05D008433 4.4e-13 78.6 46 78.3
RcHm_v2.0_Chr5g0038871 Rosa chinensis HOM05D006458 ORTHO05D008433 1.7e-12 76.6 49 65.3
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 7.8e-10 67.8 35 91.4
MD13G1229600 Malus domestica HOM05D006458 ORTHO05D245398 4.7e-07 58.5 42 64.3
Nitab4.5_0000286g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 4.0e-06 55.5 59 49.2


User provided reference genes

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