Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G118600 Phaseolus vulgaris HOM05D005563 ORTHO05D006667 2.6e-247 858.2 413 100.0
VMungo1080G1448 Vigna mungo HOM05D005563 ORTHO05D006667 1.7e-219 765.8 407 91.2
Glyma.13G312100 Glycine max HOM05D005563 ORTHO05D006667 5.6e-202 707.6 413 82.8
Lj3g0011209 Lotus japonicus HOM05D005563 ORTHO05D006667 4.2e-181 638.3 409 77.3
Psat7g014680 Pisum sativum HOM05D005563 ORTHO05D006667 2.9e-174 615.5 438 70.8
TPR.G23443 Trifolium pratense HOM05D005563 ORTHO05D006667 1.6e-169 599.7 426 72.3
Medtr8g103020 Medicago truncatula HOM05D005563 ORTHO05D006667 8.2e-169 597.4 429 71.6
Lalb_Chr24g0393341 Lupinus albus HOM05D005563 ORTHO05D006667 4.5e-167 591.7 407 72.2
arahy.Tifrunner.gnm1.ann1.QV839S Arachis hypogaea HOM05D005563 ORTHO05D006667 2.5e-165 585.9 415 72.3
arahy.Tifrunner.gnm1.ann1.NB4SND Arachis hypogaea HOM05D005563 ORTHO05D006667 1.0e-142 510.8 434 65.0
QL09p001227 Quercus lobata HOM05D005563 ORTHO05D006667 1.7e-137 493.4 405 64.2
Cfa007306 Carpinus fangiana HOM05D005563 ORTHO05D006667 1.1e-136 490.7 412 62.6
Dinv22054 Davidia involucrata HOM05D005563 ORTHO05D006667 5.9e-135 485.0 407 62.4
Prupe.8G002700 Prunus persica HOM05D005563 ORTHO05D006667 2.9e-134 482.6 409 62.3
GSVIVG01037139001 Vitis vinifera HOM05D005563 ORTHO05D006667 5.0e-134 481.9 407 63.1
RcHm_v2.0_Chr6g0249561 Rosa chinensis HOM05D005563 ORTHO05D006667 7.2e-133 478.0 412 61.2
CiPaw.04G008700 Carya illinoinensis HOM05D005563 ORTHO05D006667 6.8e-131 471.5 407 61.7
TAR628G0232 Trochodendron aralioides HOM05D005563 ORTHO05D006667 1.5e-130 470.3 415 59.0
CANSAT64G1925 Cannabis sativa HOM05D005563 ORTHO05D006667 2.0e-130 469.9 407 60.9
CSS0040007 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 3.4e-130 469.2 409 59.9
Thecc.05G149300 Theobroma cacao HOM05D005563 ORTHO05D006667 7.5e-130 468.0 412 60.0
CSS0002080 Camellia sinensis var. sinensis HOM05D005563 ORTHO05D006667 9.8e-130 467.6 409 59.9
Duzib177G0343 Durio zibethinus HOM05D005563 ORTHO05D006667 1.4e-128 463.8 405 60.7
Actinidia29363 Actinidia chinensis HOM05D005563 ORTHO05D006667 7.0e-128 461.5 407 58.7
Ciclev10020232m.g Citrus clementina HOM05D005563 ORTHO05D006667 1.2e-127 460.7 411 58.9
Potri.013G094800 Populus trichocarpa HOM05D005563 ORTHO05D006667 1.6e-127 460.3 417 57.8
Sabra13G0080900 Salix brachista HOM05D005563 ORTHO05D006667 2.0e-127 459.9 409 58.7
FvH4_2g00270 Fragaria vesca HOM05D005563 ORTHO05D006667 5.9e-127 458.4 414 58.2
Nn5g27214 Nelumbo nucifera HOM05D005563 ORTHO05D006667 6.6e-126 454.9 429 55.9
Haze_14007 Corylus avellana HOM05D005563 ORTHO05D006667 6.1e-124 448.4 520 50.0
Rhsim01G0058900 Rhododendron simsii HOM05D005563 ORTHO05D006667 1.0e-123 447.6 407 57.5
Atru.chr13.2584 Acer truncatum HOM05D005563 ORTHO05D006667 1.8e-123 446.8 416 57.5
Cc02_g22680 Coffea canephora HOM05D005563 ORTHO05D006667 1.8e-123 446.8 407 58.0
vmacro07741 Vaccinium macrocarpon HOM05D005563 ORTHO05D006667 2.3e-123 446.4 406 58.1
TPR.G11352 Trifolium pratense HOM05D005563 ORTHO05D006667 3.0e-123 446.0 310 72.9
FAN24G3564 Fragaria x ananassa HOM05D005563 ORTHO05D006667 1.5e-122 443.7 433 55.2
PGR044G0823 Punica granatum HOM05D005563 ORTHO05D006667 2.6e-122 443.0 408 58.1
Gorai.009G262600 Gossypium raimondii HOM05D005563 ORTHO05D006667 4.4e-122 442.2 404 57.9
Rhsim01G0059200 Rhododendron simsii HOM05D005563 ORTHO05D006667 5.7e-122 441.8 407 57.7
Aqoxy1G00244 Aquilegia oxysepala HOM05D005563 ORTHO05D006667 1.7e-121 440.3 411 54.5
DCAR_010113 Daucus carota HOM05D005563 ORTHO05D006667 3.7e-121 439.1 414 57.7
MD10G1001500 Malus domestica HOM05D005563 ORTHO05D006667 2.4e-120 436.4 407 59.2
DCAR_001180 Daucus carota HOM05D005563 ORTHO05D006667 3.2e-120 436.0 414 56.3
ClCG11G000440 Citrullus lanatus HOM05D005563 ORTHO05D006667 1.5e-117 427.2 410 55.6
Migut.G00338 Erythranthe guttata HOM05D005563 ORTHO05D006667 9.5e-117 424.5 402 54.5
Nitab4.5_0006591g0020 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.6e-116 423.7 407 55.0
CsaV3_6G042510 Cucumis sativus L. HOM05D005563 ORTHO05D006667 4.7e-116 422.2 410 54.9
Oeu009445.1 Olea europaea HOM05D005563 ORTHO05D006667 6.2e-116 421.8 412 54.6
DCAR_027509 Daucus carota HOM05D005563 ORTHO05D006667 3.1e-115 419.5 413 56.2
ECA232G0495 Erigeron canadensis HOM05D004116 ORTHO05D004734 7.5e-114 414.8 401 54.9
CARHR064610 Cardamine hirsuta HOM05D005563 ORTHO05D006667 2.9e-113 412.9 409 53.5
C06p35680 Brassica napus HOM05D005563 ORTHO05D006667 6.4e-113 411.8 407 54.5
BcaC08g45784 Brassica carinata HOM05D005563 ORTHO05D006667 4.1e-112 409.1 407 54.1
A07p30780 Brassica napus HOM05D005563 ORTHO05D006667 4.1e-112 409.1 407 54.5
PSO761G0451 Papaver somniferum HOM05D005563 ORTHO05D006667 5.4e-112 408.7 419 52.5
Oeu019017.1 Olea europaea HOM05D005563 ORTHO05D006667 7.0e-112 408.3 406 54.9
BolC6t38691H Brassica oleracea HOM05D005563 ORTHO05D006667 9.2e-112 407.9 411 54.0
Eucgr.G00337 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.2e-111 407.5 406 55.4
BcaB03g15600 Brassica carinata HOM05D005563 ORTHO05D006667 4.6e-111 405.6 409 54.3
CAN.G587.23 Capsicum annuum HOM05D005563 ORTHO05D006667 4.6e-111 405.6 412 53.9
SGA_v2.0_scaffold277G46672 Striga asiatica HOM05D005563 ORTHO05D006667 6.0e-111 405.2 401 54.1
AL1G12770 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 1.7e-110 403.7 407 53.8
Thhalv10018623m.g Eutrema salsugineum HOM05D005563 ORTHO05D006667 2.3e-110 403.3 402 53.2
Sp5g26490 Schrenkiella parvula HOM05D005563 ORTHO05D006667 2.3e-110 403.3 413 53.5
AL2G30920 Arabidopsis lyrata HOM05D005563 ORTHO05D006667 6.6e-110 401.7 407 53.3
BraA07t30715Z Brassica rapa HOM05D005563 ORTHO05D006667 6.6e-110 401.7 410 53.9
AT5G24670 Arabidopsis thaliana HOM05D005563 ORTHO05D006667 8.6e-110 401.4 408 53.7
BcaB03g14889 Brassica carinata HOM05D005563 ORTHO05D006667 3.3e-109 399.4 414 54.3
TAR633G2728 Trochodendron aralioides HOM05D005563 ORTHO05D006667 7.3e-109 398.3 355 58.3
Carub.0002s1819 Capsella rubella HOM05D005563 ORTHO05D006667 1.2e-108 397.5 407 53.6
CAN.G769.9 Capsicum annuum HOM05D005563 ORTHO05D006667 8.1e-108 394.8 411 53.3
Aa31LG4G9220 Aethionema arabicum HOM05D005563 ORTHO05D006667 3.1e-107 392.9 411 52.3
Solyc03g026100.1 Solanum lycopersicum HOM05D005563 ORTHO05D006667 5.2e-107 392.1 414 52.7
THA.LOC104825030 Tarenaya hassleriana HOM05D005563 ORTHO05D006667 5.2e-107 392.1 412 51.9
PGSC0003DMG400014277 Solanum tuberosum HOM05D005563 ORTHO05D006667 8.9e-107 391.3 415 52.5
Manes.18G108800 Manihot esculenta HOM05D005563 ORTHO05D006667 1.3e-105 387.5 350 60.0
MBI14_g08074_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 2.2e-105 386.7 388 53.9
Sopen03g004940 Solanum pennellii HOM05D005563 ORTHO05D006667 1.9e-104 383.6 414 51.7
Lsat_1_v5_gn_4_170241 Lactuca sativa HOM05D005563 ORTHO05D006667 5.4e-104 382.1 402 52.0
Carub.0004s0662 Capsella rubella HOM05D005563 ORTHO05D006667 6.0e-103 378.6 397 53.1
PSO170G2533 Papaver somniferum HOM05D005563 ORTHO05D006667 1.2e-100 370.9 418 51.4
TWI18G0160 Tripterygium wilfordii HOM05D005563 ORTHO05D006667 6.8e-99 365.2 411 51.3
Nitab4.5_0001489g0080 Nicotiana tabacum HOM05D005563 ORTHO05D006667 1.2e-98 364.4 370 54.1
Hund26934 Selenicereus undatus HOM05D005563 ORTHO05D006667 1.2e-98 364.4 412 51.2
HanXRQChr15g0488461 Helianthus annuus HOM05D005563 ORTHO05D006667 2.9e-97 359.8 341 56.9
Ca_17321_v3 Cicer arietinum L. HOM05D005563 ORTHO05D006667 1.9e-96 357.1 324 61.7
Sed0012109 Sechium edule HOM05D005563 ORTHO05D006667 3.2e-96 356.3 330 59.1
PSO407G0243 Papaver somniferum HOM05D005563 ORTHO05D006667 1.3e-94 350.9 421 48.9
PSO017G5640 Papaver somniferum HOM05D005563 ORTHO05D006667 2.3e-94 350.1 420 48.8
Nitab4.5_0000079g0140 Nicotiana tabacum HOM05D005563 ORTHO05D006667 4.3e-93 345.9 405 49.9
Peaxi162Scf00078g01133 Petunia axillaris HOM05D005563 ORTHO05D006667 1.2e-90 337.8 349 54.2
ATR0580G344 Amborella trichopoda HOM05D005563 ORTHO05D006667 3.4e-90 336.3 416 46.4
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 6.4e-89 332.0 372 49.5
AUR62023340 Chenopodium quinoa HOM05D005563 ORTHO05D006667 1.1e-88 331.3 423 47.0
MELO3C022956.2 Cucumis melo HOM05D005563 ORTHO05D006667 1.9e-88 330.5 358 51.7
Gohir.A05G248000 Gossypium hirsutum HOM05D005563 ORTHO05D006667 9.9e-82 308.1 311 54.3
AUR62013814 Chenopodium quinoa HOM05D005563 ORTHO05D006667 1.7e-81 307.4 505 40.6
Gohir.D05G248801 Gossypium hirsutum HOM05D005563 ORTHO05D006667 8.4e-81 305.1 311 54.3
FAN19G1429 Fragaria x ananassa HOM05D005563 ORTHO05D006667 2.8e-76 290.0 439 43.3
BcaB03g14888 Brassica carinata HOM05D005563 ORTHO05D006667 2.6e-74 283.5 368 45.9
Eucgr.C03620 Eucalyptus grandis HOM05D005563 ORTHO05D006667 8.4e-73 278.5 281 53.4
AUR62037990 Chenopodium quinoa HOM05D005563 ORTHO05D006667 8.7e-70 268.5 313 48.6
EL10Ac1g00691 Beta vulgaris HOM05D005563 ORTHO05D006667 1.3e-68 264.6 362 47.5
Sc19g0006900 Simmondsia chinensis HOM05D005563 ORTHO05D006667 2.9e-65 253.4 295 49.8
COL.COLO4_34067 Corchorus olitorius HOM05D005563 ORTHO05D006667 7.9e-63 245.4 244 55.7
Cpa.g.sc249.8 Carica papaya HOM05D005563 ORTHO05D006667 4.2e-56 223.0 161 67.7
BolC6t39597H Brassica oleracea HOM05D005563 ORTHO05D006667 5.5e-56 222.6 369 41.7
Pp3c5_5220 Physcomitrium patens HOM05D005563 ORTHO05D006667 3.9e-54 216.5 392 36.7
Mapoly0019s0003 Marchantia polymorpha HOM05D005563 ORTHO05D006667 6.7e-54 215.7 417 36.0
CDE04G2046 Ceratophyllum demersum HOM05D005563 ORTHO05D006667 1.1e-51 208.4 265 46.8
HPP92_009712 Vanilla planifolia HOM05D005563 ORTHO05D006667 1.8e-51 207.6 266 44.0
SMO356G0078 Selaginella moellendorffii HOM05D005563 ORTHO05D006667 9.1e-51 205.3 404 34.7
AagrBONN_evm.TU.Sc2ySwM_344.1216 Anthoceros agrestis HOM05D005563 ORTHO05D006667 1.5e-50 204.5 476 33.0
SHI17431 Sapria himalayana HOM05D005563 ORTHO05D006667 2.7e-47 193.7 278 42.8
Zm00001eb088860 Zea mays HOM05D005563 ORTHO05D006667 1.8e-43 181.0 263 41.1
Eucgr.C03478 Eucalyptus grandis HOM05D005563 ORTHO05D006667 2.1e-39 167.5 220 46.4
TPR.G11340 Trifolium pratense HOM05D005563 ORTHO05D006667 3.3e-37 160.2 107 73.8
MBI14_g20078_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 1.6e-34 151.4 74 90.5
MBI08_g10505_MAGBIO Magnolia biondii HOM05D000152 ORTHO05D006667 5.9e-34 149.4 70 94.3
MBI13_g08747_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 5.9e-34 149.4 74 87.8
MCO11G544 Micromonas commoda HOM05D005563 ORTHO05D006667 7.7e-34 149.1 379 28.5
MBI15_g36474_MAGBIO Magnolia biondii HOM05D005563 ORTHO05D006667 2.5e-32 144.1 74 85.1
Eucgr.C03640 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.2e-31 141.7 97 69.1
Actinidia03534 Actinidia chinensis HOM05D005563 ORTHO05D006667 1.4e-30 138.3 242 37.6
CBR_g50242 Chara braunii HOM05D005563 ORTHO05D006667 1.0e-25 122.1 587 23.3
Eucgr.L00998 Eucalyptus grandis HOM05D005563 ORTHO05D006667 1.2e-23 115.2 186 41.4
C06p46160 Brassica napus HOM05D005563 ORTHO05D006667 8.0e-23 112.5 192 41.1
CBR_g8323 Chara braunii HOM05D005563 ORTHO05D006667 1.4e-22 111.7 173 39.3
FAN20G2324 Fragaria x ananassa HOM05D005563 ORTHO05D006667 3.4e-21 107.1 56 83.9
Thecc.10G189600 Theobroma cacao HOM05D005563 ORTHO05D006667 2.8e-20 104.0 102 52.9
Cre10.g439200 Chlamydomonas reinhardtii HOM05D005563 ORTHO05D006667 9.1e-19 99.0 442 23.5
DCAR_001179 Daucus carota HOM05D005563 ORTHO05D006667 7.7e-18 95.9 164 39.6
Eucgr.C03636 Eucalyptus grandis HOM05D005563 ORTHO05D006667 8.0e-15 85.9 167 40.1
Thecc.10G189700 Theobroma cacao HOM05D005563 ORTHO05D006667 1.8e-14 84.7 116 44.8
PRCOL_00003298 Prasinoderma coloniale HOM05D005563 ORTHO05D006667 5.7e-13 79.7 149 34.2
Haze_14787 Corylus avellana HOM05D005563 ORTHO05D006667 1.6e-10 71.6 248 27.8
Actinidia28221 Actinidia chinensis HOM05D005563 ORTHO05D006667 6.1e-07 59.7 71 50.7


User provided reference genes

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