Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 1.3e-61 239.6 125 100.0
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 1.2e-49 199.9 125 86.4
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 2.4e-47 192.2 125 77.6
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 1.7e-40 169.5 127 70.9
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 1.8e-34 149.4 135 65.9
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 3.7e-32 141.7 135 65.2
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 7.8e-30 134.0 127 59.1
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 1.7e-29 132.9 124 57.3
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 7.3e-28 127.5 128 56.2
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 6.1e-27 124.4 127 53.5
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 6.8e-26 120.9 141 52.5
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 1.5e-25 119.8 137 49.6
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 3.4e-25 118.6 140 52.1
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 6.4e-24 114.4 133 53.4
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 4.1e-23 111.7 133 52.6
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 4.1e-23 111.7 133 52.6
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 1.0e-21 107.1 143 51.0
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 8.6e-21 104.0 133 50.4
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 3.3e-20 102.1 124 50.8
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 5.6e-20 101.3 135 51.1
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 5.6e-20 101.3 135 51.1
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 5.6e-20 101.3 118 55.1
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 7.3e-20 100.9 134 51.5
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 9.5e-20 100.5 128 53.9
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 1.2e-19 100.1 130 49.2
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 1.2e-19 100.1 131 51.1
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 2.1e-19 99.4 129 48.1
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 2.8e-19 99.0 128 48.4
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 3.6e-19 98.6 135 52.6
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 4.7e-19 98.2 122 53.3
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 1.8e-18 96.3 128 53.1
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.3e-18 95.9 134 47.8
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 2.3e-18 95.9 134 48.5
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 3.1e-18 95.5 134 47.8
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 3.1e-18 95.5 144 44.4
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 3.1e-18 95.5 135 49.6
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 5.8e-17 91.3 127 47.2
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 1.3e-16 90.1 128 51.6
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 2.2e-16 89.4 132 48.5
Lalb_Chr24g0393181 Lupinus albus HOM05D007398 ORTHO05D004912 2.9e-16 89.0 112 53.6
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 8.3e-16 87.4 128 48.4
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 1.1e-15 87.0 132 47.7
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 1.1e-15 87.0 103 52.4
Lj4g0016348 Lotus japonicus HOM05D007398 ORTHO05D004912 2.4e-15 85.9 123 39.8
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 3.2e-15 85.5 113 53.1
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 5.4e-15 84.7 129 48.1
Rhsim06G0162600 Rhododendron simsii HOM05D007398 ORTHO05D004912 7.0e-15 84.3 135 43.0
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 9.2e-15 84.0 128 46.9
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.2e-14 83.6 113 49.6
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 1.6e-14 83.2 128 46.9
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.6e-14 83.2 128 46.1
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 2.1e-14 82.8 132 43.2
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 2.1e-14 82.8 128 46.9
Lj3g0008615 Lotus japonicus HOM05D007398 ORTHO05D004912 2.1e-14 82.8 119 47.9
TWI18G0787 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 2.1e-14 82.8 132 43.9
HanXRQChr03g0069481 Helianthus annuus HOM05D007398 ORTHO05D004912 3.5e-14 82.0 126 47.6
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 6.0e-14 81.3 108 50.0
Gohir.D12G159800 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.3e-13 80.1 128 46.1
CsaV3_7G003580 Cucumis sativus L. HOM05D007398 ORTHO05D004912 2.3e-13 79.3 113 46.0
Lsat_1_v5_gn_9_106500 Lactuca sativa HOM05D007398 ORTHO05D004912 3.0e-13 79.0 143 40.6
PSO541G0095 Papaver somniferum HOM05D007398 ORTHO05D004912 3.0e-13 79.0 138 37.0
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 3.9e-13 78.6 113 46.0
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 3.9e-13 78.6 113 46.0
ECA236G3422 Erigeron canadensis HOM05D007398 ORTHO05D004912 6.6e-13 77.8 137 40.9
ECA240G1365 Erigeron canadensis HOM05D007398 ORTHO05D004912 1.5e-12 76.6 120 45.0
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 1.9e-12 76.3 103 45.6
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 2.5e-12 75.9 97 47.4
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 3.3e-12 75.5 105 42.9
HanXRQChr16g0504931 Helianthus annuus HOM05D007398 ORTHO05D004912 4.3e-12 75.1 134 38.8
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 5.6e-12 74.7 126 43.7
MELO3C018817.2 Cucumis melo HOM05D007398 ORTHO05D004912 1.2e-11 73.6 113 44.2
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.2e-11 73.6 113 46.9
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 2.1e-11 72.8 131 42.0
Eucgr.K00797 Eucalyptus grandis HOM05D007398 ORTHO05D004912 6.2e-11 71.2 121 43.0
Sed0017095 Sechium edule HOM05D007398 ORTHO05D004912 1.1e-10 70.5 127 41.7
Sed0017131 Sechium edule HOM05D007398 ORTHO05D004912 1.1e-10 70.5 125 45.6
Cpa.g.sc12.298 Carica papaya HOM05D007398 ORTHO05D004912 1.4e-10 70.1 99 52.5
Duzib213G1052 Durio zibethinus HOM05D007398 ORTHO05D004912 1.8e-10 69.7 100 41.0
PGR083G1220 Punica granatum HOM05D007398 ORTHO05D004912 1.8e-10 69.7 120 41.7
ClCG02G008700 Citrullus lanatus HOM05D007398 ORTHO05D004912 2.3e-10 69.3 119 42.0
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 2.3e-10 69.3 113 45.1
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 4.0e-10 68.6 96 43.8
Sed0025347 Sechium edule HOM05D007398 ORTHO05D004912 8.9e-10 67.4 130 36.9
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 1.2e-09 67.0 126 37.3
Aa31LG3G10880 Aethionema arabicum HOM05D009587 ORTHO05D004912 9.9e-09 63.9 111 36.9
Gohir.A01G080300 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.7e-08 63.2 110 40.0
Thhalv10015018m.g Eutrema salsugineum HOM05D009587 ORTHO05D004912 2.2e-08 62.8 116 37.1
Gohir.D01G067500 Gossypium hirsutum HOM05D007398 ORTHO05D004912 2.2e-08 62.8 110 40.0
Gorai.002G089400 Gossypium raimondii HOM05D007398 ORTHO05D004912 2.2e-08 62.8 110 40.0
Phvul.008G166200 Phaseolus vulgaris HOM05D011727 ORTHO05D004912 2.2e-08 62.8 102 44.1
BcaC01g06332 Brassica carinata HOM05D009587 ORTHO05D004912 6.4e-08 61.2 94 42.6
BraA03t10733Z Brassica rapa HOM05D009587 ORTHO05D004912 6.4e-08 61.2 91 41.8
AT5G54970 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 8.3e-08 60.8 103 41.7
C03p16740 Brassica napus HOM05D009587 ORTHO05D004912 8.3e-08 60.8 91 42.9
Carub.0008s1526 Capsella rubella HOM05D009587 ORTHO05D004912 8.3e-08 60.8 107 39.3
A03p14360 Brassica napus HOM05D009587 ORTHO05D004912 1.1e-07 60.5 91 41.8
BolC3t14094H Brassica oleracea HOM05D009587 ORTHO05D004912 1.1e-07 60.5 106 41.5
THA.LOC104817668 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 1.1e-07 60.5 96 38.5
AUR62015784 Chenopodium quinoa HOM05D007398 ORTHO05D004912 1.9e-07 59.7 115 37.4
Os04g0624701 Oryza sativa ssp. japonica HOM05D007398 ORTHO05D004912 1.9e-07 59.7 109 37.6
THA.LOC104813425 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 1.9e-07 59.7 96 44.8
AL8G30440 Arabidopsis lyrata HOM05D009587 ORTHO05D004912 3.2e-07 58.9 107 41.1
Sp6g16920 Schrenkiella parvula HOM05D009587 ORTHO05D004912 4.1e-07 58.5 125 40.0
Carub.0007s1391 Capsella rubella HOM05D009587 ORTHO05D004912 7.1e-07 57.8 109 39.4
AUR62020433 Chenopodium quinoa HOM05D007398 ORTHO05D004912 7.1e-07 57.8 115 36.5
Solyc02g080560.1 Solanum lycopersicum HOM05D011575 ORTHO05D004912 7.1e-07 57.8 99 43.4
CARHR234560 Cardamine hirsuta HOM05D009587 ORTHO05D004912 9.2e-07 57.4 102 41.2
QL05p073125 Quercus lobata HOM05D007398 ORTHO05D004912 9.2e-07 57.4 91 40.7
Sopen02g025260 Solanum pennellii HOM05D011575 ORTHO05D004912 9.2e-07 57.4 99 43.4
Zm00001eb207520 Zea mays HOM05D067159 ORTHO05D050012 1.2e-06 57.0 108 41.7
QL05p073115 Quercus lobata HOM05D007398 ORTHO05D004912 2.1e-06 56.2 93 41.9
PGSC0003DMG400016451 Solanum tuberosum HOM05D011575 ORTHO05D004912 2.1e-06 56.2 96 43.8
CARHR268310 Cardamine hirsuta HOM05D009587 ORTHO05D004912 2.7e-06 55.8 104 39.4
ATR0794G061 Amborella trichopoda HOM05D007398 ORTHO05D004912 4.6e-06 55.1 137 32.1
arahy.Tifrunner.gnm1.ann1.M63A4X Arachis hypogaea HOM05D007398 ORTHO05D004912 4.6e-06 55.1 98 42.9


User provided reference genes

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