Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G111100 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 1.5e-60 236.1 127 100.0
VMungo1080G0311 Vigna mungo HOM05D007156 ORTHO05D003871 1.3e-43 179.9 127 78.7
Glyma.13G304200 Glycine max HOM05D007156 ORTHO05D003871 4.5e-41 171.4 123 77.2
Lj3g0000666 Lotus japonicus HOM05D007156 ORTHO05D003871 8.2e-27 124.0 125 60.0
Phvul.011G107900 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 8.2e-27 124.0 124 56.5
VMungo1127G0041 Vigna mungo HOM05D007156 ORTHO05D003871 1.6e-22 109.8 124 50.8
Glyma.06G301200 Glycine max HOM05D007156 ORTHO05D003871 2.1e-22 109.4 126 51.6
Psat7g163320 Pisum sativum HOM05D007156 ORTHO05D003871 2.7e-22 109.0 126 53.2
Glyma.12G103200 Glycine max HOM05D007156 ORTHO05D003871 6.0e-22 107.8 125 52.0
Potri.013G152300 Populus trichocarpa HOM05D007156 ORTHO05D003871 1.8e-21 106.3 126 50.0
Manes.12G077701 Manihot esculenta HOM05D007156 ORTHO05D003871 3.0e-21 105.5 120 51.7
Haze_12992 Corylus avellana HOM05D007156 ORTHO05D003871 5.1e-21 104.8 121 54.5
Medtr0945s0020 Medicago truncatula HOM05D007156 ORTHO05D003871 1.1e-20 103.6 121 48.8
Cfa014479 Carpinus fangiana HOM05D007156 ORTHO05D003871 2.5e-20 102.4 122 54.1
TPR.G19047 Trifolium pratense HOM05D007156 ORTHO05D003871 1.6e-19 99.8 125 47.2
Lalb_Chr24g0393601 Lupinus albus HOM05D007156 ORTHO05D003871 2.4e-18 95.9 127 48.8
Sabra13G0122400 Salix brachista HOM05D007156 ORTHO05D003871 2.4e-18 95.9 126 46.8
Potri.019G125100 Populus trichocarpa HOM05D007156 ORTHO05D003871 6.9e-18 94.4 126 45.2
Lj3g0015957 Lotus japonicus HOM05D007156 ORTHO05D003871 1.5e-17 93.2 127 48.8
TPR.G18057 Trifolium pratense HOM05D007156 ORTHO05D003871 2.6e-17 92.4 123 51.2
Medtr2g089190 Medicago truncatula HOM05D007156 ORTHO05D003871 4.5e-17 91.7 129 47.3
QL08p034497 Quercus lobata HOM05D007156 ORTHO05D003871 2.2e-16 89.4 123 49.6
Sabra19G0123400 Salix brachista HOM05D007156 ORTHO05D003871 2.2e-16 89.4 126 44.4
Atru.chr6.3108 Acer truncatum HOM05D007156 ORTHO05D003871 1.4e-15 86.7 117 47.9
CiPaw.04G120100 Carya illinoinensis HOM05D007156 ORTHO05D003871 1.9e-15 86.3 121 50.4
Thecc.02G165500 Theobroma cacao HOM05D007156 ORTHO05D003871 1.9e-15 86.3 121 46.3
Ciclev10017232m.g Citrus clementina HOM05D007156 ORTHO05D003871 2.5e-15 85.9 114 49.1
Psat5g266920 Pisum sativum HOM05D007156 ORTHO05D003871 2.5e-15 85.9 122 45.9
CSS0000680 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 4.2e-15 85.1 127 45.7
Dinv18559 Davidia involucrata HOM05D007156 ORTHO05D003871 5.5e-15 84.7 117 48.7
arahy.Tifrunner.gnm1.ann1.ABE34K Arachis hypogaea HOM05D007156 ORTHO05D003871 7.2e-15 84.3 81 60.5
Sabra19G0131200 Salix brachista HOM05D007156 ORTHO05D003871 9.4e-15 84.0 126 42.9
Hma1.2p1_0712F.1_g207550 Hydrangea macrophylla HOM05D007156 ORTHO05D003871 2.7e-14 82.4 122 43.4
FAN02G1242 Fragaria x ananassa HOM05D007156 ORTHO05D003871 4.6e-14 81.6 124 46.8
Prupe.3G223500 Prunus persica HOM05D007156 ORTHO05D003871 6.1e-14 81.3 124 48.4
Sed0007405 Sechium edule HOM05D007156 ORTHO05D003871 6.1e-14 81.3 50 80.0
Cpa.g.sc34.47 Carica papaya HOM05D007156 ORTHO05D003871 7.9e-14 80.9 70 62.9
CiPaw.03G165400 Carya illinoinensis HOM05D007156 ORTHO05D003871 1.0e-13 80.5 129 44.2
COL.COLO4_13040 Corchorus olitorius HOM05D007156 ORTHO05D003871 1.0e-13 80.5 119 45.4
FAN05G2387 Fragaria x ananassa HOM05D007156 ORTHO05D003871 1.0e-13 80.5 124 46.0
FAN09G0550 Fragaria x ananassa HOM05D007156 ORTHO05D003871 1.0e-13 80.5 124 46.0
TAR271G0004 Trochodendron aralioides HOM05D007156 ORTHO05D003871 1.4e-13 80.1 59 67.8
Migut.M00380 Erythranthe guttata HOM05D007156 ORTHO05D003871 2.3e-13 79.3 122 43.4
RcHm_v2.0_Chr2g0160641 Rosa chinensis HOM05D007156 ORTHO05D003871 3.0e-13 79.0 126 50.0
Nitab4.5_0001302g0030 Nicotiana tabacum HOM05D007156 ORTHO05D003871 5.1e-13 78.2 125 42.4
FvH4_6g43890 Fragaria vesca HOM05D007156 ORTHO05D003871 6.7e-13 77.8 124 45.2
FAN14G5947 Fragaria x ananassa HOM05D007156 ORTHO05D003871 6.7e-13 77.8 124 45.2
Gohir.A04G106700 Gossypium hirsutum HOM05D007156 ORTHO05D003871 6.7e-13 77.8 120 44.2
MBI02_g42365_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 6.7e-13 77.8 94 50.0
MBI02_g43089_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.1e-12 77.0 92 50.0
Ca_01559_v3 Cicer arietinum L. HOM05D007156 ORTHO05D003871 1.5e-12 76.6 74 58.1
Gorai.012G132600 Gossypium raimondii HOM05D007156 ORTHO05D003871 1.9e-12 76.3 122 44.3
MBI02_g42366_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.9e-12 76.3 92 48.9
MBI02_g43088_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.9e-12 76.3 92 48.9
ClCG02G001520 Citrullus lanatus HOM05D007156 ORTHO05D003871 2.5e-12 75.9 46 80.4
MBI18_g20355_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.5e-12 75.9 88 50.0
Actinidia12482 Actinidia chinensis HOM05D007156 ORTHO05D003871 5.7e-12 74.7 70 58.6
MD09G1102100 Malus domestica HOM05D007156 ORTHO05D003871 4.8e-11 71.6 122 41.8
ATR0804G053 Amborella trichopoda HOM05D007156 ORTHO05D003871 6.3e-11 71.2 50 66.0
Gorai.005G208200 Gossypium raimondii HOM05D007156 ORTHO05D003871 6.3e-11 71.2 117 41.0
CsaV3_7G003930 Cucumis sativus L. HOM05D007156 ORTHO05D003871 8.2e-11 70.9 54 72.2
MSTRG.6540 Avicennia marina HOM05D007156 ORTHO05D003871 1.1e-10 70.5 66 56.1
Solyc12g005690.1 Solanum lycopersicum HOM05D007156 ORTHO05D003871 1.1e-10 70.5 121 38.0
Gohir.D02G185700 Gossypium hirsutum HOM05D007156 ORTHO05D003871 1.4e-10 70.1 117 41.0
unitig_746.g26730 Utricularia gibba HOM05D007156 ORTHO05D003871 1.4e-10 70.1 123 37.4
Ca_26200_v3 Cicer arietinum L. HOM05D007156 ORTHO05D003871 2.4e-10 69.3 108 40.7
Gohir.A03G162600 Gossypium hirsutum HOM05D007156 ORTHO05D003871 4.1e-10 68.6 117 39.3
Nn2g11286 Nelumbo nucifera HOM05D007156 ORTHO05D003871 5.3e-10 68.2 101 42.6
Rhsim06G0154900 Rhododendron simsii HOM05D007156 ORTHO05D003871 9.1e-10 67.4 53 60.4
Dinv18957 Davidia involucrata HOM05D007156 ORTHO05D003871 1.2e-09 67.0 49 61.2
PGSC0003DMG400013754 Solanum tuberosum HOM05D007156 ORTHO05D003871 1.5e-09 66.6 99 44.4
Solyc07g052990.1 Solanum lycopersicum HOM05D007156 ORTHO05D003871 2.0e-09 66.2 72 52.8
BcaB04g18538 Brassica carinata HOM05D007866 ORTHO05D003871 2.6e-09 65.9 76 56.6
BcaB04g18539 Brassica carinata HOM05D007866 ORTHO05D003871 2.6e-09 65.9 76 56.6
TAR633G1059 Trochodendron aralioides HOM05D007866 ORTHO05D003871 2.6e-09 65.9 105 37.1
Eucgr.A01740 Eucalyptus grandis HOM05D007156 ORTHO05D003871 3.4e-09 65.5 36 83.3
C03p43730 Brassica napus HOM05D007866 ORTHO05D003871 5.9e-09 64.7 75 54.7
CSS0043735 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 5.9e-09 64.7 124 37.9
Sed0001937 Sechium edule HOM05D007156 ORTHO05D003871 1.0e-08 63.9 69 55.1
Duzib160G0418 Durio zibethinus HOM05D001601 ORTHO05D006936 1.3e-08 63.5 48 62.5
Sed0003235 Sechium edule HOM05D007156 ORTHO05D003871 1.3e-08 63.5 48 62.5
Sopen07g026540 Solanum pennellii HOM05D007156 ORTHO05D003871 1.3e-08 63.5 70 47.1
ClCG02G011170 Citrullus lanatus HOM05D007156 ORTHO05D003871 1.7e-08 63.2 56 58.9
MBI18_g38397_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.7e-08 63.2 60 51.7
Dinv17859 Davidia involucrata HOM05D001601 ORTHO05D006936 2.2e-08 62.8 106 39.6
Thecc.06G206300 Theobroma cacao HOM05D001601 ORTHO05D006936 2.2e-08 62.8 47 66.0
unitig_899.g15247 Utricularia gibba HOM05D007156 ORTHO05D003871 2.2e-08 62.8 58 50.0
BcaC01g04222 Brassica carinata HOM05D007866 ORTHO05D003871 2.9e-08 62.4 75 53.3
BraA03t12778Z Brassica rapa HOM05D007866 ORTHO05D003871 2.9e-08 62.4 76 55.3
MD09G1127500 Malus domestica HOM05D007156 ORTHO05D003871 2.9e-08 62.4 128 37.5
Nitab4.5_0009996g0020 Nicotiana tabacum HOM05D007156 ORTHO05D003871 2.9e-08 62.4 116 40.5
CiPaw.09G201000 Carya illinoinensis HOM05D007866 ORTHO05D003871 3.8e-08 62.0 97 43.3
CsaV3_6G012600 Cucumis sativus L. HOM05D007156 ORTHO05D003871 3.8e-08 62.0 56 60.7
Solyc09g011430.1 Solanum lycopersicum HOM05D007866 ORTHO05D003871 3.8e-08 62.0 135 37.8
AT3G09280 Arabidopsis thaliana HOM05D007866 ORTHO05D003871 5.0e-08 61.6 55 61.8
CAN.G86.35 Capsicum annuum HOM05D007156 ORTHO05D003871 6.5e-08 61.2 126 36.5
Nn1g03759 Nelumbo nucifera HOM05D007156 ORTHO05D003871 6.5e-08 61.2 121 33.1
Gohir.A01G221050 Gossypium hirsutum HOM05D007866 ORTHO05D003871 8.5e-08 60.8 40 67.5
Gohir.D01G209950 Gossypium hirsutum HOM05D007866 ORTHO05D003871 8.5e-08 60.8 40 67.5
Gorai.002G255600 Gossypium raimondii HOM05D007866 ORTHO05D003871 8.5e-08 60.8 40 67.5
Peaxi162Scf00012g00273 Petunia axillaris HOM05D007156 ORTHO05D003871 8.5e-08 60.8 108 39.8
Sopen09g006160 Solanum pennellii HOM05D007866 ORTHO05D003871 8.5e-08 60.8 107 38.3
THA.LOC104816660 Tarenaya hassleriana HOM05D007866 ORTHO05D003871 8.5e-08 60.8 65 50.8
AL3G20400 Arabidopsis lyrata HOM05D007866 ORTHO05D003871 1.4e-07 60.1 54 61.1
TAR633G1409 Trochodendron aralioides HOM05D007866 ORTHO05D003871 1.4e-07 60.1 47 59.6
Carub.0003s0839 Capsella rubella HOM05D007866 ORTHO05D003871 1.9e-07 59.7 52 63.5
PGSC0003DMG400037339 Solanum tuberosum HOM05D007866 ORTHO05D003871 2.5e-07 59.3 107 36.4
PGSC0003DMG400026188 Solanum tuberosum HOM05D007156 ORTHO05D003871 3.2e-07 58.9 123 36.6
Lj3g0011949 Lotus japonicus HOM05D007866 ORTHO05D003871 4.2e-07 58.5 35 74.3
RcHm_v2.0_Chr3g0464671 Rosa chinensis HOM05D007866 ORTHO05D003871 4.2e-07 58.5 62 51.6
SGA_v2.0_scaffold70G23435 Striga asiatica HOM05D007156 ORTHO05D003871 7.2e-07 57.8 120 37.5
CSS0008619 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 1.2e-06 57.0 41 61.0
CSS0048777 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 1.6e-06 56.6 73 42.5
CsaV3_4G025580 Cucumis sativus L. HOM05D007866 ORTHO05D003871 1.6e-06 56.6 69 49.3
Nitab4.5_0000362g0160 Nicotiana tabacum HOM05D007866 ORTHO05D003871 1.6e-06 56.6 66 45.5
Peaxi162Scf00007g00157 Petunia axillaris HOM05D007156 ORTHO05D003871 1.6e-06 56.6 52 55.8
PGSC0003DMG400019193 Solanum tuberosum HOM05D007866 ORTHO05D003871 1.6e-06 56.6 113 36.3
Rhsim02G0116500 Rhododendron simsii HOM05D007156 ORTHO05D003871 2.1e-06 56.2 41 61.0
Sp3g07650 Schrenkiella parvula HOM05D007866 ORTHO05D003871 2.1e-06 56.2 71 47.9
CSS0026310 Camellia sinensis var. sinensis HOM05D007866 ORTHO05D003871 2.7e-06 55.8 52 51.9
Thhalv10021969m.g Eutrema salsugineum HOM05D007866 ORTHO05D003871 2.7e-06 55.8 70 47.1
Oeu030552.1 Olea europaea HOM05D007866 ORTHO05D003871 2.7e-06 55.8 70 50.0
CARHR083640 Cardamine hirsuta HOM05D007866 ORTHO05D003871 3.6e-06 55.5 73 50.7
Nitab4.5_0005140g0010 Nicotiana tabacum HOM05D007156 ORTHO05D003871 3.6e-06 55.5 37 62.2
Potri.006G092200 Populus trichocarpa HOM05D007866 ORTHO05D003871 3.6e-06 55.5 100 40.0
PGSC0003DMG400021719 Solanum tuberosum HOM05D001601 ORTHO05D006936 3.6e-06 55.5 55 47.3
AL70U10030 Arabidopsis lyrata HOM05D007866 ORTHO05D003871 4.7e-06 55.1 70 47.1
Sabra04G0016700 Salix brachista HOM05D007156 ORTHO05D003871 6.1e-06 54.7 48 52.1
EL10Ac7g16230 Beta vulgaris HOM05D007866 ORTHO05D003871 7.9e-06 54.3 36 63.9
Nitab4.5_0008116g0010 Nicotiana tabacum HOM05D007866 ORTHO05D003871 7.9e-06 54.3 64 50.0
Potri.004G029700 Populus trichocarpa HOM05D012748 ORTHO05D014783 7.9e-06 54.3 45 57.8
Sabra16G0103600 Salix brachista HOM05D007866 ORTHO05D003871 7.9e-06 54.3 91 38.5


User provided reference genes

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