Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G107600 Phaseolus vulgaris HOM05D007281 ORTHO05D009241 4.4e-115 418.7 348 100.0
VMungo1080G1478 Vigna mungo HOM05D007281 ORTHO05D009241 2.1e-72 276.9 178 84.3
Glyma.13G301000 Glycine max HOM05D007281 ORTHO05D009241 5.6e-70 268.9 361 79.8
Lj3g0021775 Lotus japonicus HOM05D007281 ORTHO05D009241 6.5e-50 202.2 211 60.2
Ca_01535_v3 Cicer arietinum L. HOM05D007281 ORTHO05D009241 6.0e-48 195.7 210 59.5
Lalb_Chr14g0366621 Lupinus albus HOM05D007281 ORTHO05D009241 5.7e-46 189.1 205 57.1
Psat5g268080 Pisum sativum HOM05D007281 ORTHO05D009241 1.2e-43 181.4 224 54.9
arahy.Tifrunner.gnm1.ann1.JM9TK1 Arachis hypogaea HOM05D007281 ORTHO05D009241 1.7e-42 177.6 192 55.2
TPR.G27076 Trifolium pratense HOM05D007281 ORTHO05D009241 2.5e-41 173.7 222 52.3
arahy.Tifrunner.gnm1.ann1.HBB9ZN Arachis hypogaea HOM05D001233 ORTHO05D009241 7.2e-41 172.2 208 51.0
Medtr2g090030 Medicago truncatula HOM05D007281 ORTHO05D009241 7.9e-40 168.7 185 56.8
Medtr2g007050 Medicago truncatula HOM05D007281 ORTHO05D009241 1.0e-39 168.3 185 56.2
arahy.Tifrunner.gnm1.ann1.F4A8JX Arachis hypogaea HOM05D007281 ORTHO05D009241 5.1e-39 166.0 138 63.8
Nitab4.5_0001871g0100 Nicotiana tabacum HOM05D007281 ORTHO05D009241 8.2e-29 132.1 194 42.3
Dinv15494 Davidia involucrata HOM05D007281 ORTHO05D009241 2.0e-27 127.5 188 42.6
Nitab4.5_0002370g0080 Nicotiana tabacum HOM05D007281 ORTHO05D009241 2.2e-26 124.0 197 42.1
DCAR_012978 Daucus carota HOM05D007281 ORTHO05D009241 5.0e-26 122.9 186 42.5
TAR633G2446 Trochodendron aralioides HOM05D007281 ORTHO05D009241 5.0e-26 122.9 200 42.0
TAR636G0075 Trochodendron aralioides HOM05D007281 ORTHO05D009241 1.1e-25 121.7 201 44.8
Peaxi162Scf00007g02726 Petunia axillaris HOM05D007281 ORTHO05D009241 3.2e-25 120.2 173 43.9
Cfa014545 Carpinus fangiana HOM05D007281 ORTHO05D009241 4.2e-25 119.8 200 41.5
Glyma.12G201200 Glycine max HOM05D007281 ORTHO05D009241 1.6e-24 117.9 216 88.4
QL03p011182 Quercus lobata HOM05D007281 ORTHO05D009241 1.6e-24 117.9 193 43.5
Solyc07g054680.3 Solanum lycopersicum HOM05D007281 ORTHO05D009241 7.9e-24 115.5 204 38.2
GSVIVG01020865001 Vitis vinifera HOM05D007281 ORTHO05D009241 7.9e-24 115.5 184 42.9
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla HOM05D007281 ORTHO05D009241 3.9e-23 113.2 178 38.8
Sc06g0009160 Simmondsia chinensis HOM05D007281 ORTHO05D009241 3.9e-23 113.2 169 42.6
Atru.chr6.3074 Acer truncatum HOM05D007281 ORTHO05D009241 6.7e-23 112.5 184 43.5
CiPaw.03G169800 Carya illinoinensis HOM05D007281 ORTHO05D009241 6.7e-23 112.5 184 41.8
Rhsim04G0063100 Rhododendron simsii HOM05D007281 ORTHO05D009241 2.0e-22 110.9 195 39.0
Sabra09G0050300 Salix brachista HOM05D007281 ORTHO05D009241 2.0e-22 110.9 184 38.6
Thecc.02G171700 Theobroma cacao HOM05D007281 ORTHO05D009241 2.6e-22 110.5 193 38.3
Potri.009G067400 Populus trichocarpa HOM05D007281 ORTHO05D009241 4.4e-22 109.8 132 47.0
Actinidia30489 Actinidia chinensis HOM05D007281 ORTHO05D009241 2.2e-21 107.5 185 40.0
CAN.G508.23 Capsicum annuum HOM05D007281 ORTHO05D009241 3.7e-21 106.7 174 40.8
Lj1P735T42 Lonicera japonica HOM05D007281 ORTHO05D009241 4.8e-21 106.3 192 39.6
EL10As1g23104 Beta vulgaris HOM05D007281 ORTHO05D009241 8.2e-21 105.5 184 37.5
ClCG01G013900 Citrullus lanatus HOM05D007281 ORTHO05D009241 8.2e-21 105.5 183 41.0
AUR62041771 Chenopodium quinoa HOM05D007281 ORTHO05D009241 1.1e-20 105.1 197 36.0
Manes.01G177300 Manihot esculenta HOM05D007281 ORTHO05D009241 1.4e-20 104.8 233 34.3
Haze_13088 Corylus avellana HOM05D007281 ORTHO05D009241 1.8e-20 104.4 194 39.2
PGR042G3246 Punica granatum HOM05D007281 ORTHO05D009241 3.1e-20 103.6 215 35.8
CSS0001951 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 4.1e-20 103.2 182 39.6
CSS0030135 Camellia sinensis var. sinensis HOM05D007281 ORTHO05D009241 4.1e-20 103.2 182 39.6
PGSC0003DMG400018370 Solanum tuberosum HOM05D007281 ORTHO05D009241 7.0e-20 102.4 159 42.8
Potri.001G273100 Populus trichocarpa HOM05D007281 ORTHO05D009241 5.9e-19 99.4 164 43.3
Sabra16G0168300 Salix brachista HOM05D007281 ORTHO05D009241 5.9e-19 99.4 164 41.5
CANSAT64G1356 Cannabis sativa HOM05D007281 ORTHO05D009241 3.8e-18 96.7 182 35.2
ECA234G1359 Erigeron canadensis HOM05D007281 ORTHO05D009241 3.2e-17 93.6 200 33.5
MBI03_g06061_MAGBIO Magnolia biondii HOM05D007281 ORTHO05D009241 9.4e-17 92.0 176 36.9
HanXRQChr15g0488101 Helianthus annuus HOM05D007281 ORTHO05D009241 3.6e-16 90.1 132 35.6
TWI36G0005 Tripterygium wilfordii HOM05D007281 ORTHO05D009241 1.0e-15 88.6 167 36.5
Hund01235 Selenicereus undatus HOM05D007281 ORTHO05D009241 1.4e-15 88.2 159 34.0
Hund01238 Selenicereus undatus HOM05D007281 ORTHO05D009241 1.4e-15 88.2 159 34.0
Nn8g41289 Nelumbo nucifera HOM05D007281 ORTHO05D009241 4.0e-15 86.7 178 33.1
Cpa.g.sc116.70 Carica papaya HOM05D007281 ORTHO05D009241 6.7e-15 85.9 123 43.1
CsaV3_1G014130 Cucumis sativus L. HOM05D007281 ORTHO05D009241 8.8e-15 85.5 131 42.0
SalBow7G4701 Salvia bowleyana HOM05D007281 ORTHO05D009241 8.8e-15 85.5 195 33.3
MSTRG.13304 Avicennia marina HOM05D007281 ORTHO05D009241 1.2e-14 85.1 140 41.4
Ciclev10016159m.g Citrus clementina HOM05D007281 ORTHO05D009241 1.2e-14 85.1 119 43.7
Sed0007470 Sechium edule HOM05D007281 ORTHO05D009241 1.5e-14 84.7 180 36.7
C05p11270 Brassica napus HOM05D007281 ORTHO05D009241 5.7e-14 82.8 142 39.4
BolC5t29876H Brassica oleracea HOM05D007281 ORTHO05D009241 5.7e-14 82.8 142 39.4
Duzib052G0115 Durio zibethinus HOM05D007281 ORTHO05D009241 7.5e-14 82.4 161 39.1
Aqoxy1G00179 Aquilegia oxysepala HOM05D007281 ORTHO05D009241 9.7e-14 82.0 205 30.2
Ah.12g062420 Amaranthus hybridus HOM05D007281 ORTHO05D009241 1.3e-13 81.6 213 30.5
Thhalv10007999m.g Eutrema salsugineum HOM05D007281 ORTHO05D009241 2.2e-13 80.9 142 36.6
A06p09560 Brassica napus HOM05D007281 ORTHO05D009241 2.8e-13 80.5 142 37.3
Gohir.A04G105900 Gossypium hirsutum HOM05D007281 ORTHO05D009241 3.7e-13 80.1 180 33.3
Carub.0001s1156 Capsella rubella HOM05D007281 ORTHO05D009241 8.2e-13 79.0 143 38.5
Sp1g10520 Schrenkiella parvula HOM05D007281 ORTHO05D009241 1.1e-12 78.6 142 37.3
BraA06t24146Z Brassica rapa HOM05D007281 ORTHO05D009241 1.4e-12 78.2 142 38.0
AL1G23070 Arabidopsis lyrata HOM05D007281 ORTHO05D009241 1.8e-12 77.8 142 36.6
Gorai.012G131800 Gossypium raimondii HOM05D007281 ORTHO05D009241 5.3e-12 76.3 198 31.3
Eucgr.A01777 Eucalyptus grandis HOM05D007281 ORTHO05D009241 7.0e-12 75.9 95 44.2
Gohir.D04G145700 Gossypium hirsutum HOM05D007281 ORTHO05D009241 7.0e-12 75.9 198 30.8
Cc05_g06270 Coffea canephora HOM05D007281 ORTHO05D009241 9.1e-12 75.5 212 30.7
MD17G1084400 Malus domestica HOM05D007281 ORTHO05D009241 1.6e-11 74.7 181 27.1
Aa31LG1G2830 Aethionema arabicum HOM05D007281 ORTHO05D009241 3.5e-11 73.6 146 37.0
THA.LOC104809493 Tarenaya hassleriana HOM05D007281 ORTHO05D009241 5.9e-11 72.8 140 32.9
CARHR012220 Cardamine hirsuta HOM05D007281 ORTHO05D009241 6.5e-10 69.3 144 37.5
Prupe.3G231200 Prunus persica HOM05D007281 ORTHO05D009241 8.5e-10 68.9 126 31.7
PSO384G2432 Papaver somniferum HOM05D007281 ORTHO05D009241 1.1e-09 68.6 193 31.6
SGA_v2.0_scaffold70G23463 Striga asiatica HOM05D007281 ORTHO05D009241 1.1e-09 68.6 183 32.2
HPP92_019763 Vanilla planifolia HOM05D007281 ORTHO05D009241 7.2e-09 65.9 161 33.5
FvH4_6g24020 Fragaria vesca HOM05D007281 ORTHO05D009241 3.6e-08 63.5 151 29.8
FAN14G1737 Fragaria x ananassa HOM05D007281 ORTHO05D009241 3.6e-08 63.5 151 29.8
FAN14G4544 Fragaria x ananassa HOM05D007281 ORTHO05D009241 8.0e-08 62.4 151 29.1
FvH4_6g44590 Fragaria vesca HOM05D007281 ORTHO05D009241 2.3e-07 60.8 151 29.1
Lsat_1_v5_gn_4_69540 Lactuca sativa HOM05D007281 ORTHO05D009241 6.8e-07 59.3 154 25.3
AT1G11900 Arabidopsis thaliana HOM05D007281 ORTHO05D009241 8.8e-07 58.9 118 38.1
FAN02G4278 Fragaria x ananassa HOM05D007281 ORTHO05D009241 8.8e-07 58.9 150 28.0
vmacro09292 Vaccinium macrocarpon HOM05D007281 ORTHO05D009241 3.4e-06 57.0 111 36.9
Os05g0481800 Oryza sativa ssp. japonica HOM05D007281 ORTHO05D009241 9.8e-06 55.5 157 28.7


User provided reference genes

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