Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 1.2e-84 316.6 171 100.0
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 7.5e-68 260.8 172 84.9
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 3.5e-65 251.9 174 77.6
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 4.7e-62 241.5 173 77.5
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 1.2e-60 236.9 178 75.3
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 3.4e-60 235.3 173 75.7
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 2.9e-59 232.3 174 76.4
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 3.2e-58 228.8 173 72.3
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 4.1e-58 228.4 176 73.9
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 6.0e-57 224.6 174 74.1
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 7.8e-57 224.2 177 69.5
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 3.0e-56 222.2 175 69.7
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 3.0e-56 222.2 173 69.9
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 6.6e-56 221.1 175 72.6
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 1.1e-55 220.3 176 71.6
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 1.1e-55 220.3 176 71.6
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 1.9e-55 219.5 175 72.0
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 2.5e-55 219.2 175 71.4
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 4.3e-55 218.4 177 68.9
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 5.6e-55 218.0 174 70.7
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 1.6e-54 216.5 179 67.0
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 2.1e-54 216.1 178 68.5
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 2.8e-54 215.7 175 70.3
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 2.8e-54 215.7 175 69.1
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.8e-54 215.7 175 69.1
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 2.8e-54 215.7 177 69.5
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 3.6e-54 215.3 179 67.6
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 4.7e-54 214.9 180 69.4
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 4.7e-54 214.9 174 68.4
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 4.7e-54 214.9 179 67.6
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 1.1e-53 213.8 177 68.4
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 1.1e-53 213.8 177 65.0
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 1.1e-53 213.8 175 70.9
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 3.1e-53 212.2 176 68.8
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 3.1e-53 212.2 177 64.4
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 4.0e-53 211.8 171 70.2
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 4.0e-53 211.8 175 68.0
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 4.0e-53 211.8 175 68.6
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 5.2e-53 211.5 179 68.7
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 5.2e-53 211.5 187 67.4
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 8.9e-53 210.7 177 69.5
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.0e-52 209.5 176 68.2
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 5.8e-52 208.0 176 67.6
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 5.8e-52 208.0 176 67.0
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 9.9e-52 207.2 176 67.6
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 2.2e-51 206.1 180 66.1
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 2.9e-51 205.7 175 69.1
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 3.7e-51 205.3 175 65.7
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 3.7e-51 205.3 177 67.8
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 4.9e-51 204.9 174 67.8
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 6.4e-51 204.5 176 67.6
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 6.4e-51 204.5 178 64.6
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 1.1e-50 203.8 175 66.9
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.4e-50 203.4 173 67.1
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.4e-50 203.4 174 64.4
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 3.2e-50 202.2 176 66.5
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 3.2e-50 202.2 176 66.5
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 5.4e-50 201.4 179 67.0
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 7.1e-50 201.1 176 63.6
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 7.1e-50 201.1 174 66.1
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 1.2e-49 200.3 175 66.3
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.5e-49 198.7 176 66.5
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 4.6e-49 198.4 174 63.8
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 6.0e-49 198.0 174 66.7
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 2.3e-48 196.1 171 63.2
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 3.9e-48 195.3 173 65.3
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 6.6e-48 194.5 180 63.9
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 6.6e-48 194.5 175 65.7
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 1.1e-47 193.7 177 62.1
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 1.5e-47 193.4 176 62.5
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 1.9e-47 193.0 176 64.8
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 3.3e-47 192.2 173 68.8
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 3.3e-47 192.2 131 74.0
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 4.3e-47 191.8 178 64.6
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 1.2e-46 190.3 166 66.9
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 1.2e-46 190.3 172 61.6
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 1.6e-46 189.9 177 66.7
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 2.1e-46 189.5 175 65.1
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.1e-46 189.5 178 64.0
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 2.8e-46 189.1 180 61.1
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 3.6e-46 188.7 171 61.4
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 8.1e-46 187.6 126 77.8
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.1e-45 187.2 173 62.4
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 1.8e-45 186.4 172 60.5
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.8e-45 186.4 173 61.8
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 3.1e-45 185.7 174 62.6
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 5.2e-45 184.9 115 80.0
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 8.9e-45 184.1 179 60.9
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 8.9e-45 184.1 168 65.5
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 2.0e-44 183.0 180 60.6
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 2.6e-44 182.6 179 61.5
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 2.6e-44 182.6 179 61.5
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 2.6e-44 182.6 176 59.7
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 1.7e-43 179.9 177 58.8
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 1.7e-43 179.9 103 87.4
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 2.2e-43 179.5 114 78.1
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 2.9e-43 179.1 181 60.8
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 2.9e-43 179.1 181 60.8
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 3.8e-43 178.7 181 60.2
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 4.9e-43 178.3 159 64.8
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 4.9e-43 178.3 166 59.0
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 6.4e-43 177.9 170 58.2
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 1.1e-42 177.2 174 59.8
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 1.4e-42 176.8 177 59.3
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 3.2e-42 175.6 153 63.4
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 5.4e-42 174.9 176 60.2
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 1.6e-41 173.3 176 59.1
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 2.1e-41 172.9 173 60.7
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 3.5e-41 172.2 176 59.1
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 1.7e-40 169.9 177 58.2
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 1.7e-40 169.9 163 60.7
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 2.3e-40 169.5 169 60.9
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 2.3e-40 169.5 130 67.7
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 5.1e-40 168.3 172 57.6
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 6.4e-35 151.4 110 68.2
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.9e-34 149.8 140 65.0
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 1.6e-33 146.7 85 85.9
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 5.1e-32 141.7 143 58.0
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 6.6e-32 141.4 134 58.2
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 6.2e-30 134.8 171 46.2
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 9.0e-29 131.0 134 59.7
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 1.2e-28 130.6 139 54.0
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 1.3e-27 127.1 171 46.2
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 8.4e-27 124.4 118 55.9
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 1.2e-20 104.0 170 41.2
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 8.4e-19 97.8 126 52.4
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 8.4e-19 97.8 154 38.3
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 6.7e-16 88.2 170 42.9
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 8.2e-06 54.7 98 26.5


User provided reference genes

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