Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 8.3e-218 760.0 360 100.0
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 3.2e-169 598.6 320 90.0
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 4.8e-157 558.1 319 83.1
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 1.5e-129 466.8 326 69.9
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 3.2e-129 465.7 295 75.9
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 2.1e-128 463.0 317 69.4
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 1.8e-127 459.9 293 72.7
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 4.0e-127 458.8 326 69.3
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 2.2e-125 453.0 291 73.2
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 5.0e-114 415.2 259 74.1
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 8.6e-114 414.5 262 71.0
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 1.1e-113 414.1 262 73.3
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 5.5e-113 411.8 270 70.4
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 5.5e-113 411.8 270 70.4
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 7.2e-113 411.4 262 69.8
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 2.1e-112 409.8 286 67.8
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 1.0e-111 407.5 274 66.4
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 1.0e-111 407.5 277 66.8
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 2.3e-111 406.4 291 67.4
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 2.3e-111 406.4 265 69.4
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.2e-110 404.1 316 61.4
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 1.5e-110 403.7 268 69.4
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 3.4e-110 402.5 260 70.8
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 1.3e-109 400.6 321 60.7
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 2.2e-109 399.8 277 66.8
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 2.9e-109 399.4 268 68.7
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 3.7e-109 399.1 276 67.0
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 6.3e-109 398.3 262 68.3
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 6.3e-109 398.3 263 68.4
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 8.3e-109 397.9 262 69.1
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 1.1e-108 397.5 282 66.3
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 2.4e-108 396.4 261 69.0
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 2.4e-108 396.4 261 69.0
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 4.1e-108 395.6 261 69.0
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 9.2e-108 394.4 259 69.9
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 9.2e-108 394.4 271 66.1
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 3.5e-107 392.5 287 63.8
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 5.9e-107 391.7 315 62.2
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 5.9e-107 391.7 349 57.3
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 1.3e-106 390.6 262 68.7
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 6.6e-106 388.3 273 62.6
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 8.6e-106 387.9 260 69.2
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 1.9e-105 386.7 285 65.3
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 1.6e-104 383.6 273 65.2
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 8.0e-104 381.3 272 64.3
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 1.0e-103 380.9 296 60.1
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 4.0e-103 379.0 242 72.3
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 5.2e-103 378.6 265 65.3
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 6.8e-103 378.3 264 67.0
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 2.0e-102 376.7 264 66.7
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 2.0e-102 376.7 277 62.5
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 4.4e-102 375.6 264 66.3
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 4.4e-102 375.6 264 66.3
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 4.4e-102 375.6 262 64.9
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 7.5e-102 374.8 272 63.2
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 7.5e-102 374.8 311 60.1
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 9.8e-102 374.4 290 61.7
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 9.8e-102 374.4 264 65.5
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 1.3e-101 374.0 262 64.5
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 2.2e-101 373.2 264 66.3
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 2.2e-101 373.2 264 66.3
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 2.9e-101 372.9 335 57.3
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 4.9e-101 372.1 259 66.8
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 8.3e-101 371.3 264 65.9
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 1.1e-100 370.9 264 65.9
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 1.4e-100 370.5 316 55.7
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 1.4e-100 370.5 314 58.3
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 1.9e-100 370.2 259 66.4
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 9.2e-100 367.9 292 60.3
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 1.6e-99 367.1 259 65.3
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 3.5e-99 365.9 269 62.1
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 4.6e-99 365.5 262 66.4
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 7.8e-99 364.8 272 64.0
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 1.5e-97 360.5 296 57.4
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 1.5e-97 360.5 263 66.2
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 1.9e-97 360.1 246 68.7
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 2.1e-96 356.7 260 64.2
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 2.8e-96 356.3 312 57.7
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 3.6e-96 355.9 251 64.9
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 4.9e-93 345.5 260 57.7
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 1.9e-92 343.6 175 90.3
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 2.4e-92 343.2 270 59.3
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.6e-91 340.5 270 58.5
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 6.0e-91 338.6 267 58.4
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 1.2e-88 330.9 328 49.7
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 2.3e-87 326.6 248 63.3
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 3.7e-85 319.3 324 50.6
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 8.4e-85 318.2 316 53.2
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 3.2e-84 316.2 323 49.2
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.1e-83 313.5 313 53.4
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 2.1e-83 313.5 234 61.5
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 7.8e-83 311.6 312 51.0
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 2.5e-81 306.6 318 49.7
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 8.1e-80 301.6 222 62.2
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 1.3e-74 284.3 244 57.8
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 7.3e-73 278.5 269 48.0
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 3.1e-71 273.1 213 59.2
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 1.6e-67 260.8 281 44.8
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 1.2e-59 234.6 260 42.7
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 4.6e-59 232.6 315 44.4
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 2.5e-57 226.9 319 42.3
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 2.5e-44 183.7 292 36.0
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 8.2e-40 168.7 186 46.8
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.0e-29 135.2 78 76.9
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.0e-13 82.0 67 53.7
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 5.0e-13 79.7 100 46.0
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.8e-10 71.2 39 76.9
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 1.8e-10 71.2 34 94.1
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 7.7e-06 55.8 47 46.8


User provided reference genes

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