Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 2.6e-93 345.5 195 100.0
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 3.0e-73 278.9 196 83.7
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 5.8e-56 221.5 203 69.0
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 2.9e-47 192.6 202 67.3
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 6.6e-36 154.8 225 53.3
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 1.5e-35 153.7 225 52.9
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 2.5e-35 152.9 201 59.2
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 2.8e-34 149.4 207 58.5
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 1.8e-33 146.7 207 53.1
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 6.4e-31 138.3 204 57.8
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 7.8e-29 131.3 217 51.6
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 1.1e-27 127.5 217 43.8
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 1.6e-26 123.6 230 40.9
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 2.8e-26 122.9 241 45.2
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 4.0e-25 119.0 240 45.8
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 6.9e-25 118.2 217 48.4
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 1.2e-24 117.5 230 44.8
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 2.0e-24 116.7 234 42.7
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 5.8e-24 115.2 187 48.7
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 6.4e-23 111.7 218 42.7
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 1.9e-22 110.2 220 45.5
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 9.3e-22 107.8 216 44.0
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 9.3e-22 107.8 230 43.9
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 1.6e-21 107.1 235 37.0
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 2.1e-21 106.7 245 38.4
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 3.5e-21 105.9 243 38.7
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 3.5e-21 105.9 213 40.8
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 1.0e-20 104.4 238 39.5
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 1.0e-20 104.4 231 44.6
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 1.3e-20 104.0 237 38.4
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 1.3e-20 104.0 214 40.7
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 2.3e-20 103.2 226 41.6
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 5.1e-20 102.1 212 45.3
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 6.7e-20 101.7 218 39.9
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 1.5e-19 100.5 240 35.8
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 5.6e-19 98.6 210 43.8
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 9.6e-19 97.8 205 43.4
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 1.6e-18 97.1 226 44.2
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 2.8e-18 96.3 220 47.7
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 3.7e-18 95.9 229 42.4
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 4.8e-18 95.5 229 41.0
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 4.8e-18 95.5 230 40.0
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 6.2e-18 95.1 213 46.0
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 8.1e-18 94.7 223 38.1
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 2.4e-17 93.2 246 36.6
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 4.0e-17 92.4 183 41.0
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 5.3e-17 92.0 234 40.2
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 6.9e-17 91.7 187 47.1
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 9.0e-17 91.3 227 41.4
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 9.0e-17 91.3 226 38.9
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.5e-16 90.5 220 39.1
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 7.6e-16 88.2 228 37.3
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 3.2e-14 82.8 222 36.0
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 1.2e-13 80.9 201 36.8
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 1.2e-13 80.9 238 35.3
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 1.6e-13 80.5 242 40.1
FAN09G3062 Fragaria x ananassa HOM05D007603 ORTHO05D009604 2.1e-13 80.1 125 44.0
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 4.6e-13 79.0 230 43.0
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 4.6e-13 79.0 219 36.1
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 1.0e-12 77.8 237 32.9
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 1.8e-12 77.0 223 35.0
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 1.8e-12 77.0 223 35.0
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 1.8e-12 77.0 223 35.0
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 2.3e-12 76.6 210 37.1
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 3.0e-12 76.3 227 37.4
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 3.9e-12 75.9 220 40.5
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 3.9e-12 75.9 245 37.6
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 5.1e-12 75.5 208 44.7
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 6.7e-12 75.1 150 46.7
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 1.1e-11 74.3 152 41.4
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 1.1e-11 74.3 151 39.1
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 1.1e-11 74.3 235 38.3
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 1.1e-11 74.3 208 34.6
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 2.5e-11 73.2 140 44.3
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 2.5e-11 73.2 216 34.7
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 2.1e-10 70.1 216 38.4
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 1.1e-09 67.8 119 41.2
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 1.4e-09 67.4 240 32.5
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 1.8e-09 67.0 217 38.7
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 1.8e-09 67.0 256 33.2
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 1.8e-09 67.0 112 43.8
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 4.0e-09 65.9 201 40.3
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 9.0e-09 64.7 168 37.5
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 1.3e-07 60.8 221 35.7
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 2.2e-07 60.1 223 35.4
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 2.2e-07 60.1 223 35.9
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 2.2e-07 60.1 81 51.9
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 2.9e-07 59.7 203 35.0
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 1.1e-06 57.8 242 37.6
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 2.5e-06 56.6 239 35.6
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 9.3e-06 54.7 165 35.2


User provided reference genes

Program Settings