Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G093000 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 9.5e-70 266.9 155 100.0
VMungo1080G0677 Vigna mungo HOM05D002846 ORTHO05D002692 1.9e-38 162.9 156 62.8
Glyma.13G288700 Glycine max HOM05D002846 ORTHO05D002692 2.5e-38 162.5 161 64.6
Glyma.12G212900 Glycine max HOM05D002846 ORTHO05D002692 4.3e-38 161.8 160 63.8
Lalb_Chr14g0367581 Lupinus albus HOM05D002846 ORTHO05D002692 4.6e-24 115.2 181 44.2
Medtr2g083300 Medicago truncatula HOM05D002846 ORTHO05D002692 7.4e-22 107.8 179 46.4
TPR.G19979 Trifolium pratense HOM05D002846 ORTHO05D002692 2.5e-17 92.8 182 41.8
Psat5g251520 Pisum sativum HOM05D002846 ORTHO05D002692 3.5e-16 89.0 165 41.8
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 6.1e-16 88.2 188 37.8
Nn1g07065 Nelumbo nucifera HOM05D002846 ORTHO05D002692 1.1e-14 84.0 171 38.0
Hma1.2p1_1344F.1_g277060 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 2.5e-14 82.8 156 40.4
TAR624G1330 Trochodendron aralioides HOM05D002846 ORTHO05D002692 5.7e-14 81.6 190 35.8
Duzib213G0532 Durio zibethinus HOM05D002846 ORTHO05D002692 3.7e-13 79.0 167 39.5
Dinv40727 Davidia involucrata HOM05D002846 ORTHO05D002692 4.8e-13 78.6 177 40.7
Actinidia05119 Actinidia chinensis HOM05D002846 ORTHO05D002692 6.3e-13 78.2 167 35.9
Cfa020399 Carpinus fangiana HOM05D002846 ORTHO05D002692 1.1e-12 77.4 178 37.1
GSVIVG01001985001 Vitis vinifera HOM05D002846 ORTHO05D002692 1.1e-12 77.4 183 38.3
Actinidia27214 Actinidia chinensis HOM05D002846 ORTHO05D002692 1.4e-12 77.0 183 36.1
Prupe.4G205800 Prunus persica HOM05D002846 ORTHO05D002692 2.4e-12 76.3 163 37.4
TWI39G1011 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 3.1e-12 75.9 162 37.7
Potri.011G135700 Populus trichocarpa HOM05D002846 ORTHO05D002692 4.1e-12 75.5 187 36.4
TAR626G0168 Trochodendron aralioides HOM05D002846 ORTHO05D002692 4.1e-12 75.5 169 34.3
Haze_09635 Corylus avellana HOM05D002846 ORTHO05D002692 5.3e-12 75.1 179 36.3
FAN25G2313 Fragaria x ananassa HOM05D002846 ORTHO05D002692 9.0e-12 74.3 184 37.5
Potri.001G419400 Populus trichocarpa HOM05D002846 ORTHO05D002692 9.0e-12 74.3 188 37.2
CsaV3_3G023230 Cucumis sativus L. HOM05D002846 ORTHO05D002692 2.0e-11 73.2 164 36.0
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 2.0e-11 73.2 180 31.1
TWI38G1873 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 3.4e-11 72.4 173 39.3
Sabra11G0121900 Salix brachista HOM05D002846 ORTHO05D002692 4.5e-11 72.0 180 34.4
QL08p012603 Quercus lobata HOM05D002846 ORTHO05D002692 5.9e-11 71.6 166 36.1
Gohir.A12G156600 Gossypium hirsutum HOM05D002846 ORTHO05D002692 7.7e-11 71.2 164 37.2
Lalb_Chr19g0135751 Lupinus albus HOM05D002846 ORTHO05D002692 1.3e-10 70.5 161 37.9
Duzib251G0618 Durio zibethinus HOM05D002846 ORTHO05D002692 1.7e-10 70.1 186 31.7
Potri.014G151900 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.7e-10 70.1 167 33.5
Nitab4.5_0002083g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.2e-10 69.7 157 33.8
Peaxi162Scf00007g01016 Petunia axillaris HOM05D002846 ORTHO05D002692 2.9e-10 69.3 184 31.5
Cfa014424 Carpinus fangiana HOM05D002846 ORTHO05D002692 3.8e-10 68.9 181 33.1
Haze_12882 Corylus avellana HOM05D002846 ORTHO05D002692 5.0e-10 68.6 180 33.3
FvH4_3g22010 Fragaria vesca HOM05D002846 ORTHO05D002692 6.5e-10 68.2 178 35.4
Gohir.D12G159433 Gossypium hirsutum HOM05D002846 ORTHO05D002692 6.5e-10 68.2 174 35.1
ClCG05G014610 Citrullus lanatus HOM05D002846 ORTHO05D002692 8.5e-10 67.8 162 34.6
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 8.5e-10 67.8 167 32.3
Thecc.07G046400 Theobroma cacao HOM05D002846 ORTHO05D002692 8.5e-10 67.8 160 33.8
Duzib268G1153 Durio zibethinus HOM05D002846 ORTHO05D002692 1.1e-09 67.4 161 36.6
Sabra16G0285000 Salix brachista HOM05D002846 ORTHO05D002692 1.4e-09 67.0 180 37.8
Gohir.A01G076300 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.9e-09 66.6 160 34.4
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 1.9e-09 66.6 161 35.4
MELO3C018090.2 Cucumis melo HOM05D002846 ORTHO05D002692 2.5e-09 66.2 165 33.9
FvH4_6g43420 Fragaria vesca HOM05D002846 ORTHO05D002692 2.5e-09 66.2 182 33.0
FAN21G2316 Fragaria x ananassa HOM05D002846 ORTHO05D002692 2.5e-09 66.2 182 32.4
Nitab4.5_0001884g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.5e-09 66.2 166 32.5
Cc05_g04910 Coffea canephora HOM05D002846 ORTHO05D002692 3.2e-09 65.9 185 34.1
Cc05_g13390 Coffea canephora HOM05D002846 ORTHO05D002692 3.2e-09 65.9 185 31.9
ATR0697G184 Amborella trichopoda HOM05D002846 ORTHO05D002692 4.2e-09 65.5 159 34.6
Lj3g0000319 Lotus japonicus HOM05D027495 ORTHO05D030011 4.2e-09 65.5 156 34.6
Gorai.008G172600 Gossypium raimondii HOM05D002846 ORTHO05D002692 5.5e-09 65.1 166 35.5
Hma1.2p1_0249F.1_g102340 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 5.5e-09 65.1 170 33.5
Lalb_Chr01g0005591 Lupinus albus HOM05D002846 ORTHO05D002692 5.5e-09 65.1 161 36.6
Sed0016321 Sechium edule HOM05D002846 ORTHO05D002692 5.5e-09 65.1 159 33.3
Gohir.D01G063800 Gossypium hirsutum HOM05D002846 ORTHO05D002692 9.4e-09 64.3 160 33.8
Gorai.002G084300 Gossypium raimondii HOM05D002846 ORTHO05D002692 9.4e-09 64.3 160 33.8
TWI38G2122 Tripterygium wilfordii HOM05D002846 ORTHO05D002692 9.4e-09 64.3 175 36.0
CiPaw.11G185800 Carya illinoinensis HOM05D002846 ORTHO05D002692 1.2e-08 63.9 185 33.0
Ciclev10018295m.g Citrus clementina HOM05D002846 ORTHO05D002692 1.2e-08 63.9 184 32.1
Aqoxy4G01970 Aquilegia oxysepala HOM05D002846 ORTHO05D002692 1.6e-08 63.5 184 33.2
Nitab4.5_0000006g0090 Nicotiana tabacum HOM05D002846 ORTHO05D002692 1.6e-08 63.5 153 32.7
CSS0004659 Camellia sinensis var. sinensis HOM05D002846 ORTHO05D002692 2.1e-08 63.2 203 30.0
AUR62037135 Chenopodium quinoa HOM05D002846 ORTHO05D002692 2.1e-08 63.2 153 35.9
MD03G1209200 Malus domestica HOM05D002846 ORTHO05D002692 2.1e-08 63.2 172 33.1
Psat5g264560 Pisum sativum HOM05D002846 ORTHO05D002692 2.1e-08 63.2 174 34.5
FAN14G0905 Fragaria x ananassa HOM05D002846 ORTHO05D002692 2.7e-08 62.8 182 29.7
TPR.G4595 Trifolium pratense HOM05D002846 ORTHO05D002692 3.6e-08 62.4 171 30.4
PGR083G2810 Punica granatum HOM05D002846 ORTHO05D002692 4.6e-08 62.0 174 32.8
Glyma.06G303502 Glycine max HOM05D002846 ORTHO05D002692 6.1e-08 61.6 171 31.0
Glyma.12G100400 Glycine max HOM05D002846 ORTHO05D002692 6.1e-08 61.6 171 31.0
Nitab4.5_0015723g0010 Nicotiana tabacum HOM05D002846 ORTHO05D002692 6.1e-08 61.6 141 34.0
Manes.03G127850 Manihot esculenta HOM05D002846 ORTHO05D002692 7.9e-08 61.2 202 30.7
DCAR_010032 Daucus carota HOM05D002846 ORTHO05D002692 1.0e-07 60.8 148 32.4
Nitab4.5_0001176g0060 Nicotiana tabacum HOM05D002846 ORTHO05D002692 1.0e-07 60.8 165 32.1
RcHm_v2.0_Chr2g0159761 Rosa chinensis HOM05D002846 ORTHO05D002692 1.0e-07 60.8 179 31.3
Atru.chr6.3164 Acer truncatum HOM05D002846 ORTHO05D002692 1.4e-07 60.5 183 31.1
HanXRQChr15g0496381 Helianthus annuus HOM05D002846 ORTHO05D002692 1.4e-07 60.5 185 28.6
Lj3g0002811 Lotus japonicus HOM05D002846 ORTHO05D002692 1.8e-07 60.1 184 32.1
BcaC05g28139 Brassica carinata HOM05D002846 ORTHO05D002692 2.3e-07 59.7 150 35.3
Gorai.005G150200 Gossypium raimondii HOM05D002846 ORTHO05D002692 2.3e-07 59.7 153 34.0
FAN09G0250 Fragaria x ananassa HOM05D002846 ORTHO05D002692 3.0e-07 59.3 186 29.0
Medtr2g088590 Medicago truncatula HOM05D002846 ORTHO05D002692 3.0e-07 59.3 161 31.7
Sabra02G0175700 Salix brachista HOM05D002846 ORTHO05D002692 3.9e-07 58.9 191 30.4
PGSC0003DMG400025494 Solanum tuberosum HOM05D002846 ORTHO05D002692 3.9e-07 58.9 176 30.1
VMungo0971G0001 Vigna mungo HOM05D002846 ORTHO05D002692 3.9e-07 58.9 177 32.2
arahy.Tifrunner.gnm1.ann1.C24T6R Arachis hypogaea HOM05D002846 ORTHO05D002692 5.1e-07 58.5 70 52.9
arahy.Tifrunner.gnm1.ann1.SQ6SJP Arachis hypogaea HOM05D002846 ORTHO05D002692 5.1e-07 58.5 70 52.9
HanXRQChr05g0159181 Helianthus annuus HOM05D002846 ORTHO05D002692 5.1e-07 58.5 150 32.0
Lj1A867G31 Lonicera japonica HOM05D002846 ORTHO05D002692 5.1e-07 58.5 95 41.1
CiPaw.04G116900 Carya illinoinensis HOM05D002846 ORTHO05D002692 6.7e-07 58.2 179 31.3
Glyma.12G194600 Glycine max HOM05D002846 ORTHO05D002692 6.7e-07 58.2 164 32.3
SalBow1G8286 Salvia bowleyana HOM05D002846 ORTHO05D002692 8.8e-07 57.8 166 30.1
VMungo1127G2104 Vigna mungo HOM05D002846 ORTHO05D002692 8.8e-07 57.8 117 38.5
Eucgr.F00971 Eucalyptus grandis HOM05D002846 ORTHO05D002692 1.1e-06 57.4 156 34.6
Thecc.02G312900 Theobroma cacao HOM05D002846 ORTHO05D002692 1.1e-06 57.4 198 31.3
QL08p033485 Quercus lobata HOM05D002846 ORTHO05D002692 1.5e-06 57.0 169 32.0
DCAR_019769 Daucus carota HOM05D002846 ORTHO05D002692 2.0e-06 56.6 156 32.7
Phvul.011G105200 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 2.0e-06 56.6 179 27.9
Dinv39698 Davidia involucrata HOM05D002846 ORTHO05D002692 2.5e-06 56.2 190 28.9
FAN02G4078 Fragaria x ananassa HOM05D002846 ORTHO05D002692 2.5e-06 56.2 186 28.5
Nitab4.5_0002229g0220 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.5e-06 56.2 89 41.6
Peaxi162Scf00932g00218 Petunia axillaris HOM05D002846 ORTHO05D002692 2.5e-06 56.2 176 27.8
Lalb_Chr03g0028801 Lupinus albus HOM05D002846 ORTHO05D002692 3.3e-06 55.8 198 29.3
GSVIVG01030606001 Vitis vinifera HOM05D002846 ORTHO05D002692 4.3e-06 55.5 178 32.0
AL8G30220 Arabidopsis lyrata HOM05D010845 ORTHO05D002692 5.7e-06 55.1 150 33.3
Cpa.g.c34122 Carica papaya HOM05D002846 ORTHO05D002692 7.4e-06 54.7 158 31.0
ClCG02G008550 Citrullus lanatus HOM05D002846 ORTHO05D002692 7.4e-06 54.7 156 32.7
FAN05G4571 Fragaria x ananassa HOM05D002846 ORTHO05D002692 9.7e-06 54.3 178 27.5
Gohir.D13G145200 Gossypium hirsutum HOM05D002846 ORTHO05D002692 9.7e-06 54.3 160 31.9
Sopen12g001770 Solanum pennellii HOM05D002846 ORTHO05D002692 9.7e-06 54.3 166 31.3


User provided reference genes

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