Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G092400 Phaseolus vulgaris HOM05D006334 ORTHO05D008320 1.1e-109 400.6 299 100.0
Psat5g251960 Pisum sativum HOM05D006334 ORTHO05D008320 1.2e-81 307.4 299 81.6
VMungo1080G0184 Vigna mungo HOM05D006334 ORTHO05D008320 2.3e-80 303.1 299 83.3
Potri.001G418900 Populus trichocarpa HOM05D006334 ORTHO05D008320 3.9e-80 302.4 298 61.7
Lj3g0002745 Lotus japonicus HOM05D006334 ORTHO05D008320 9.7e-79 297.7 299 78.6
Ca_01740_v3 Cicer arietinum L. HOM05D006334 ORTHO05D008320 6.3e-78 295.0 299 81.6
arahy.Tifrunner.gnm1.ann1.9AY9GA Arachis hypogaea HOM05D006334 ORTHO05D008320 2.6e-76 289.7 299 70.2
arahy.Tifrunner.gnm1.ann1.Q0MPW2 Arachis hypogaea HOM05D006334 ORTHO05D008320 2.6e-76 289.7 299 70.6
ClCG05G014700 Citrullus lanatus HOM05D006334 ORTHO05D008320 6.5e-75 285.0 300 72.0
Haze_09629 Corylus avellana HOM05D006334 ORTHO05D008320 4.2e-74 282.3 300 68.7
CiPaw.12G127100 Carya illinoinensis HOM05D006334 ORTHO05D008320 1.6e-73 280.4 300 70.7
Prupe.4G205200 Prunus persica HOM05D006334 ORTHO05D008320 4.7e-73 278.9 300 68.7
FAN11G3716 Fragaria x ananassa HOM05D006334 ORTHO05D008320 6.1e-73 278.5 300 64.3
Glyma.13G288200 Glycine max HOM05D006334 ORTHO05D008320 8.0e-73 278.1 300 80.3
QL08p012879 Quercus lobata HOM05D006334 ORTHO05D008320 1.0e-72 277.7 299 72.9
Medtr2g083200 Medicago truncatula HOM05D006334 ORTHO05D008320 2.3e-72 276.6 301 75.4
TWI38G1766 Tripterygium wilfordii HOM05D006334 ORTHO05D008320 2.3e-72 276.6 300 73.7
FvH4_3g21950 Fragaria vesca HOM05D006334 ORTHO05D008320 3.9e-72 275.8 300 62.3
FAN25G1013 Fragaria x ananassa HOM05D006334 ORTHO05D008320 8.8e-72 274.6 296 67.6
Cfa020403 Carpinus fangiana HOM05D001306 ORTHO05D001159 4.4e-71 272.3 298 68.5
DCAR_022532 Daucus carota HOM05D006334 ORTHO05D008320 6.3e-70 268.5 297 62.0
CSS0039549 Camellia sinensis var. sinensis HOM05D006334 ORTHO05D008320 8.2e-70 268.1 297 61.6
Eucgr.F03434 Eucalyptus grandis HOM05D006334 ORTHO05D008320 8.2e-70 268.1 303 76.6
RcHm_v2.0_Chr5g0037801 Rosa chinensis HOM05D006334 ORTHO05D008320 8.2e-70 268.1 301 60.8
MD11G1224700 Malus domestica HOM05D006334 ORTHO05D008320 2.4e-69 266.5 298 67.1
MD03G1210000 Malus domestica HOM05D006334 ORTHO05D008320 5.3e-69 265.4 298 60.4
TPR.G19971 Trifolium pratense HOM05D006334 ORTHO05D008320 5.3e-69 265.4 215 80.5
Lsat_1_v5_gn_7_109541 Lactuca sativa HOM05D006334 ORTHO05D008320 9.1e-69 264.6 298 66.4
AUR62020535 Chenopodium quinoa HOM05D006334 ORTHO05D008320 2.6e-68 263.1 297 62.3
Glyma.12G213500 Glycine max HOM05D006334 ORTHO05D008320 8.5e-67 258.1 300 77.3
GSVIVG01001978001 Vitis vinifera HOM05D006334 ORTHO05D008320 1.1e-66 257.7 300 68.3
Ciclev10009059m.g Citrus clementina HOM05D006334 ORTHO05D008320 4.2e-66 255.8 190 82.1
QL08p012752 Quercus lobata HOM05D006334 ORTHO05D008320 2.1e-65 253.4 188 80.9
Lalb_Chr24g0400251 Lupinus albus HOM05D006334 ORTHO05D008320 1.4e-64 250.8 140 89.3
COL.COLO4_09585 Corchorus olitorius HOM05D006334 ORTHO05D008320 5.2e-64 248.8 298 64.8
CDE05G3377 Ceratophyllum demersum HOM05D006334 ORTHO05D008320 5.7e-63 245.4 210 73.8
Hund23297 Selenicereus undatus HOM05D006334 ORTHO05D008320 7.5e-63 245.0 293 61.1
Sabra16G0284400 Salix brachista HOM05D006334 ORTHO05D008320 9.7e-63 244.6 298 56.0
Gohir.D01G062800 Gossypium hirsutum HOM05D006334 ORTHO05D008320 1.7e-62 243.8 298 61.7
Manes.03G123900 Manihot esculenta HOM05D006334 ORTHO05D008320 1.7e-62 243.8 300 60.3
Zm00001eb298180 Zea mays HOM05D006334 ORTHO05D008320 1.7e-62 243.8 190 74.2
Thecc.07G050800 Theobroma cacao HOM05D006334 ORTHO05D008320 8.2e-62 241.5 183 80.3
vmacro09744 Vaccinium macrocarpon HOM05D006334 ORTHO05D008320 8.2e-62 241.5 297 63.6
MELO3C018091.2 Cucumis melo HOM05D006334 ORTHO05D008320 3.1e-61 239.6 300 65.3
Gohir.A01G075500 Gossypium hirsutum HOM05D006334 ORTHO05D008320 4.1e-61 239.2 298 60.7
Ah.04g165560 Amaranthus hybridus HOM05D006334 ORTHO05D008320 5.3e-61 238.8 295 53.6
HanXRQChr11g0337741 Helianthus annuus HOM05D006334 ORTHO05D008320 7.0e-61 238.4 288 60.8
Aqoxy1G03666 Aquilegia oxysepala HOM05D006334 ORTHO05D008320 9.1e-61 238.0 219 69.9
CsaV3_3G023200 Cucumis sativus L. HOM05D006334 ORTHO05D008320 9.1e-61 238.0 300 65.0
CsaV3_UNG104770 Cucumis sativus L. HOM05D006334 ORTHO05D008320 9.1e-61 238.0 300 65.0
Nitab4.5_0002342g0070 Nicotiana tabacum HOM05D006334 ORTHO05D008320 9.1e-61 238.0 298 62.8
Os07g0103200 Oryza sativa ssp. japonica HOM05D006334 ORTHO05D008320 1.6e-60 237.3 200 74.0
Duzib268G1565 Durio zibethinus HOM05D006334 ORTHO05D008320 2.0e-60 236.9 299 62.9
Lj8A166G85 Lonicera japonica HOM05D006334 ORTHO05D008320 2.0e-60 236.9 311 61.4
Atru.chr2.3229 Acer truncatum HOM05D006334 ORTHO05D008320 3.5e-60 236.1 298 58.1
Aa31LG5G10300 Aethionema arabicum HOM05D006334 ORTHO05D008320 4.5e-60 235.7 197 75.6
Dinv22296 Davidia involucrata HOM05D006334 ORTHO05D008320 4.5e-60 235.7 298 50.0
Nitab4.5_0002229g0170 Nicotiana tabacum HOM05D006334 ORTHO05D008320 4.5e-60 235.7 298 61.7
AL7G25680 Arabidopsis lyrata HOM05D006334 ORTHO05D008320 5.9e-60 235.3 190 77.9
Sc07g0002760 Simmondsia chinensis HOM05D006334 ORTHO05D008320 5.9e-60 235.3 294 59.5
Gorai.002G083500 Gossypium raimondii HOM05D006334 ORTHO05D008320 7.7e-60 235.0 298 60.7
Nn1g07058 Nelumbo nucifera HOM05D006334 ORTHO05D008320 1.0e-59 234.6 184 79.9
AT4G27120 Arabidopsis thaliana HOM05D006334 ORTHO05D008320 2.2e-59 233.4 193 76.2
RhsimUnG0252800 Rhododendron simsii HOM05D006334 ORTHO05D008320 2.2e-59 233.4 249 63.5
MBI02_g23962_MAGBIO Magnolia biondii HOM05D006334 ORTHO05D008320 5.0e-59 232.3 298 58.7
CAN.G1110.6 Capsicum annuum HOM05D006334 ORTHO05D008320 8.5e-59 231.5 298 63.1
Solyc10g006460.3 Solanum lycopersicum HOM05D006334 ORTHO05D008320 1.1e-58 231.1 191 71.7
ECA236G0521 Erigeron canadensis HOM05D006334 ORTHO05D008320 1.9e-58 230.3 296 57.4
PSO210G7302 Papaver somniferum HOM05D006334 ORTHO05D008320 7.2e-58 228.4 299 56.9
PSO832G3755 Papaver somniferum HOM05D006334 ORTHO05D008320 1.6e-57 227.3 299 55.9
PGR031G1291 Punica granatum HOM05D006334 ORTHO05D008320 1.6e-57 227.3 306 70.3
Thhalv10025846m.g Eutrema salsugineum HOM05D006334 ORTHO05D008320 3.6e-57 226.1 182 78.0
Carub.0007s1372 Capsella rubella HOM05D006334 ORTHO05D008320 4.7e-57 225.7 187 76.5
Cc05_g13330 Coffea canephora HOM05D006334 ORTHO05D008320 8.0e-57 224.9 299 61.9
Carub.0008s0614 Capsella rubella HOM05D006334 ORTHO05D008320 1.4e-56 224.2 182 78.0
BolC1t02259H Brassica oleracea HOM05D006334 ORTHO05D008320 1.8e-56 223.8 141 81.6
CARHR234770 Cardamine hirsuta HOM05D006334 ORTHO05D008320 1.8e-56 223.8 301 58.8
BcaNung03057 Brassica carinata HOM05D006334 ORTHO05D008320 4.0e-56 222.6 141 81.6
C01p23260 Brassica napus HOM05D006334 ORTHO05D008320 5.2e-56 222.2 141 81.6
Haze_24344 Corylus avellana HOM05D003220 ORTHO05D003944 5.2e-56 222.2 298 51.0
BraA01t01781Z Brassica rapa HOM05D006334 ORTHO05D008320 6.8e-56 221.9 141 81.6
AUR62015668 Chenopodium quinoa HOM05D006334 ORTHO05D008320 6.8e-56 221.9 310 50.3
THA.LOC104812531 Tarenaya hassleriana HOM05D006334 ORTHO05D008320 6.8e-56 221.9 284 60.9
A03p57090 Brassica napus HOM05D006334 ORTHO05D008320 8.8e-56 221.5 143 80.4
BraA03t14779Z Brassica rapa HOM05D006334 ORTHO05D008320 8.8e-56 221.5 143 80.4
Sp7g25090 Schrenkiella parvula HOM05D006334 ORTHO05D008320 8.8e-56 221.5 181 77.3
BcaC06g32710 Brassica carinata HOM05D006334 ORTHO05D008320 2.0e-55 220.3 142 80.3
C07p54970 Brassica napus HOM05D006334 ORTHO05D008320 2.0e-55 220.3 142 80.3
PGSC0003DMG400014399 Solanum tuberosum HOM05D006334 ORTHO05D008320 2.6e-55 219.9 139 81.3
BolC7t46013H Brassica oleracea HOM05D006334 ORTHO05D001501 1.3e-54 217.6 132 83.3
Sopen10g002410 Solanum pennellii HOM05D006334 ORTHO05D008320 1.7e-54 217.2 139 80.6
Sed0009538 Sechium edule HOM05D006334 ORTHO05D008320 8.3e-54 214.9 132 81.8
A01p18260 Brassica napus HOM05D006334 ORTHO05D008320 2.4e-53 213.4 122 86.9
Migut.M01801 Erythranthe guttata HOM05D006334 ORTHO05D008320 3.1e-53 213.0 192 72.4
AUR62005409 Chenopodium quinoa HOM05D006334 ORTHO05D008320 7.0e-53 211.8 294 50.7
SGA_v2.0_scaffold101G29789 Striga asiatica HOM05D006334 ORTHO05D008320 7.0e-53 211.8 187 73.8
Peaxi162Scf00407g00312 Petunia axillaris HOM05D006334 ORTHO05D008320 9.1e-53 211.5 139 77.7
Pp3c20_19360 Physcomitrium patens HOM05D006334 ORTHO05D008320 9.1e-53 211.5 207 65.7
HPP92_014117 Vanilla planifolia HOM05D006334 ORTHO05D008320 9.1e-53 211.5 197 69.5
MSTRG.27096 Avicennia marina HOM05D006334 ORTHO05D008320 7.7e-52 208.4 192 71.4
TAR629G3436 Trochodendron aralioides HOM05D006334 ORTHO05D008320 1.0e-51 208.0 297 60.3
Mapoly0114s0022 Marchantia polymorpha HOM05D006334 ORTHO05D008320 2.3e-51 206.8 203 66.5
unitig_748.g7233 Utricularia gibba HOM05D006334 ORTHO05D008320 2.3e-51 206.8 301 55.8
SEGI_34639 Sequoiadendron giganteum HOM05D006334 ORTHO05D008320 6.6e-51 205.3 200 68.5
AagrBONN_evm.TU.Sc2ySwM_228.581 Anthoceros agrestis HOM05D006334 ORTHO05D008320 1.2e-49 201.1 194 66.5
EL10Ac4g07940 Beta vulgaris HOM05D006334 ORTHO05D008320 2.1e-49 200.3 306 57.5
Peaxi162Scf00450g00858 Petunia axillaris HOM05D006334 ORTHO05D008320 2.1e-49 200.3 309 54.4
AagrBONN_evm.TU.Sc2ySwM_368.826 Anthoceros agrestis HOM05D006334 ORTHO05D008320 4.7e-49 199.1 194 64.9
FAN21G3458 Fragaria x ananassa HOM05D006334 ORTHO05D008320 2.6e-47 193.4 311 51.8
SMO143G0307 Selaginella moellendorffii HOM05D006334 ORTHO05D008320 4.1e-45 186.0 125 74.4
Actinidia35324 Actinidia chinensis HOM05D006334 ORTHO05D008320 7.0e-45 185.3 134 82.1
Actinidia10714 Actinidia chinensis HOM05D006334 ORTHO05D008320 1.5e-42 177.6 101 87.1
CBR_g8852 Chara braunii HOM05D006334 ORTHO05D008320 5.2e-40 169.1 192 57.8
Cre02.g101100 Chlamydomonas reinhardtii HOM05D006334 ORTHO05D008320 7.0e-29 132.1 119 57.1
Cpa.g.sc97.55 Carica papaya HOM05D006334 ORTHO05D008320 7.3e-26 122.1 115 74.8
Oeu032444.1 Olea europaea HOM05D006334 ORTHO05D008320 7.3e-26 122.1 106 72.6
FAN16G1435 Fragaria x ananassa HOM05D006334 ORTHO05D008320 1.4e-24 117.9 70 82.9
Cpa.g.sc97.53 Carica papaya HOM05D006334 ORTHO05D008320 2.6e-23 113.6 70 81.4
Haze_27349 Corylus avellana HOM05D006334 ORTHO05D008320 1.7e-22 110.9 215 43.7
ATR0697G296 Amborella trichopoda HOM05D006334 ORTHO05D008320 4.9e-22 109.4 222 45.0
FAN16G3226 Fragaria x ananassa HOM05D006334 ORTHO05D008320 1.6e-20 104.4 200 56.5
BcaC09g50615 Brassica carinata HOM05D006334 ORTHO05D008320 1.9e-18 97.4 59 79.7


User provided reference genes

Program Settings