Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 7.6e-189 663.7 339 100.0
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 2.5e-171 605.5 339 91.2
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 4.7e-162 574.7 339 87.3
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 1.5e-160 569.7 340 87.6
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 1.2e-146 523.5 341 80.1
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 2.2e-143 512.7 342 77.2
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.3e-140 503.4 343 77.0
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 1.3e-140 503.4 343 77.0
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 4.7e-138 495.0 340 75.9
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 1.5e-136 490.0 341 75.7
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 6.1e-130 468.0 345 73.0
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 8.9e-121 437.6 342 69.0
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 2.6e-120 436.0 341 68.9
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 1.5e-112 410.2 303 70.3
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 3.4e-112 409.1 339 64.0
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 5.8e-112 408.3 342 65.5
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 5.8e-112 408.3 339 64.9
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 7.5e-112 407.9 340 63.8
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 3.7e-111 405.6 339 63.7
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 6.4e-111 404.8 342 66.1
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 1.1e-110 404.1 344 64.5
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 1.4e-110 403.7 344 64.2
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 2.4e-110 402.9 342 64.9
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 5.4e-110 401.7 347 63.7
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 1.2e-109 400.6 316 66.5
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 1.6e-109 400.2 341 63.6
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.6e-109 400.2 282 71.6
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 3.5e-109 399.1 342 63.7
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 3.5e-109 399.1 340 63.5
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 1.7e-108 396.7 340 63.5
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 3.9e-108 395.6 318 64.8
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 8.6e-108 394.4 318 64.5
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 8.6e-108 394.4 350 60.9
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 2.8e-106 389.4 342 62.9
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 4.7e-106 388.7 340 62.1
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 6.8e-105 384.8 348 62.6
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 1.2e-104 384.0 281 69.0
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 1.7e-103 380.2 342 60.8
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 3.8e-103 379.0 352 59.4
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 1.9e-102 376.7 338 61.2
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 1.9e-102 376.7 343 60.3
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 2.4e-102 376.3 343 60.1
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 4.2e-102 375.6 281 69.4
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 9.2e-102 374.4 278 68.3
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 1.6e-101 373.6 347 59.4
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 2.7e-101 372.9 339 58.4
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 4.6e-101 372.1 297 64.3
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 1.7e-100 370.2 351 59.8
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 2.3e-100 369.8 352 57.7
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 3.9e-100 369.0 328 60.7
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 5.1e-100 368.6 297 64.0
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 6.6e-100 368.2 308 64.6
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 6.6e-100 368.2 343 58.6
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 8.7e-100 367.9 340 60.3
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 2.5e-99 366.3 332 60.5
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 5.6e-99 365.2 339 59.6
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 9.6e-99 364.4 343 58.9
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 2.1e-98 363.2 345 58.3
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 2.1e-98 363.2 318 60.7
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 1.1e-97 360.9 345 57.1
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 1.8e-97 360.1 281 65.8
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 1.5e-96 357.1 356 56.2
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 4.4e-96 355.5 270 69.6
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 6.4e-95 351.7 269 65.1
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 2.7e-93 346.3 345 55.7
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 3.5e-93 345.9 348 56.9
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 4.6e-93 345.5 348 56.9
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 6.6e-92 341.7 276 63.0
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 8.7e-92 341.3 314 59.2
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 2.5e-91 339.7 345 57.1
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 4.3e-91 339.0 345 56.8
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 5.6e-91 338.6 342 55.6
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 2.1e-90 336.7 349 56.2
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 1.1e-89 334.3 350 54.6
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 2.4e-89 333.2 349 55.9
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 9.0e-89 331.3 347 56.2
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 1.5e-88 330.5 353 57.5
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 1.5e-88 330.5 282 60.6
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 1.7e-87 327.0 346 55.8
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 1.7e-87 327.0 346 55.8
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 1.1e-86 324.3 276 63.4
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 4.2e-86 322.4 348 56.0
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 7.1e-86 321.6 348 55.5
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 1.2e-85 320.9 316 56.0
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 3.5e-85 319.3 355 53.2
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 1.9e-83 313.5 348 54.3
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 7.1e-78 295.0 276 57.2
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 8.2e-74 281.6 183 77.6
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 1.4e-73 280.8 296 48.0
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 4.0e-73 279.3 204 69.1
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 9.4e-62 241.5 296 47.3
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 2.1e-61 240.4 278 47.5
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 1.9e-54 217.2 265 43.0
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 2.4e-49 200.3 229 52.8
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 4.5e-48 196.1 133 69.9
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 5.2e-44 182.6 120 70.0
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 1.6e-37 161.0 270 37.4
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 2.4e-33 147.1 264 34.8
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 2.9e-31 140.2 245 41.2
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 1.1e-30 138.3 132 55.3
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 1.4e-28 131.3 181 46.4
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 1.7e-26 124.4 114 57.9
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 2.5e-22 110.5 125 48.0
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 7.2e-22 109.0 269 30.1
MCO11G003 Micromonas commoda HOM05D007317 ORTHO05D009299 7.0e-17 92.4 281 27.0
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 9.5e-14 82.0 104 43.3
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 8.9e-12 75.5 237 25.3


User provided reference genes

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