Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G088418 Phaseolus vulgaris HOM05D011107 ORTHO05D012795 1.1e-58 229.6 102 100.0
SalBow1G4588 Salvia bowleyana HOM05D011107 ORTHO05D012795 3.1e-53 211.5 99 93.9
Glyma.15G187600 Glycine max HOM05D001750 ORTHO05D001825 7.7e-36 153.7 71 100.0
Glyma.15G187800 Glycine max HOM05D001750 ORTHO05D001825 7.7e-36 153.7 71 100.0
VMungo0329G0005 Vigna mungo HOM05D011107 ORTHO05D012795 8.5e-35 150.2 68 100.0
Peaxi162Scf00079g00616 Petunia axillaris HOM05D011107 ORTHO05D012795 1.1e-34 149.8 101 74.3
FAN14G3152 Fragaria x ananassa HOM05D011107 ORTHO05D012795 9.4e-34 146.7 68 97.1
Hma1.2p1_0492F.1_g164730 Hydrangea macrophylla HOM05D011107 ORTHO05D012795 4.4e-31 137.9 76 84.2
Nitab4.5_0000172g1840 Nicotiana tabacum HOM05D001750 ORTHO05D012795 5.0e-27 124.4 68 83.8
arahy.Tifrunner.gnm1.ann1.MYM2HE Arachis hypogaea HOM05D001750 ORTHO05D012795 5.5e-26 120.9 63 90.5
AL2G35420 Arabidopsis lyrata HOM05D011107 ORTHO05D012795 2.1e-25 119.0 101 58.4
CARHR282870 Cardamine hirsuta HOM05D011107 ORTHO05D012795 2.1e-25 119.0 101 58.4
Hma1.2p1_0859F.1_g229495 Hydrangea macrophylla HOM05D011107 ORTHO05D012795 4.7e-25 117.9 58 91.4
Nitab4.5_0001788g0310 Nicotiana tabacum HOM05D011107 ORTHO05D012795 2.2e-22 109.0 54 90.7
Nitab4.5_0000085g0160 Nicotiana tabacum HOM05D001750 ORTHO05D001825 7.8e-20 100.5 61 77.0
Peaxi162Scf00373g00817 Petunia axillaris HOM05D011107 ORTHO05D012795 7.5e-15 84.0 46 73.9
Psat4g179120 Pisum sativum HOM05D001750 ORTHO05D030195 7.5e-15 84.0 51 72.5
C04p50440 Brassica napus HOM05D067297 ORTHO05D012795 5.4e-13 77.8 41 90.2
BolC4t26642H Brassica oleracea HOM05D067297 ORTHO05D012795 5.4e-13 77.8 41 90.2
arahy.Tifrunner.gnm1.ann1.97K591 Arachis hypogaea HOM05D011107 ORTHO05D012795 2.7e-12 75.5 34 100.0
Sp3g25950 Schrenkiella parvula HOM05D011107 ORTHO05D012795 7.8e-12 73.9 33 87.9
HPP92_006534 Vanilla planifolia HOM05D011107 ORTHO05D012795 1.7e-11 72.8 74 45.9
arahy.Tifrunner.gnm1.ann1.BE3YYP Arachis hypogaea HOM05D001750 ORTHO05D001825 5.6e-10 67.8 39 76.9
Nitab4.5_0000172g2270 Nicotiana tabacum HOM05D001750 ORTHO05D012795 1.4e-08 63.2 33 75.8
Nitab4.5_0001152g0320 Nicotiana tabacum HOM05D001750 ORTHO05D001825 4.0e-08 61.6 40 62.5
arahy.Tifrunner.gnm1.ann1.JP5E1S Arachis hypogaea HOM05D037227 ORTHO05D031574 1.2e-07 60.1 33 75.8
SGA_v2.0_scaffold245G44454 Striga asiatica HOM05D011107 ORTHO05D012795 4.9e-06 54.7 26 88.5
LjContig00315g0010666 Lotus japonicus HOM05D001750 ORTHO05D001825 8.3e-06 53.9 26 88.5


User provided reference genes

Program Settings