Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G087800 Phaseolus vulgaris HOM05D008268 ORTHO05D010144 6.2e-174 614.0 303 100.0
VMungo1080G0851 Vigna mungo HOM05D008268 ORTHO05D010144 9.9e-156 553.5 307 91.5
Glyma.13G282800 Glycine max HOM05D008268 ORTHO05D010144 3.2e-114 415.6 344 70.3
Glyma.12G217800 Glycine max HOM05D008268 ORTHO05D010144 4.0e-88 328.9 283 68.9
Lalb_Chr25g0286831 Lupinus albus HOM05D008268 ORTHO05D010144 4.3e-66 255.8 349 49.0
CiPaw.11G178900 Carya illinoinensis HOM05D008268 ORTHO05D010144 9.6e-42 174.9 342 41.5
Thecc.07G068700 Theobroma cacao HOM05D008268 ORTHO05D010144 2.6e-39 166.8 315 42.2
Psat5g247560 Pisum sativum HOM05D008268 ORTHO05D010144 2.2e-38 163.7 349 40.4
arahy.Tifrunner.gnm1.ann1.Y898LB Arachis hypogaea HOM05D008268 ORTHO05D010144 6.4e-38 162.2 333 40.8
Medtr2g081240 Medicago truncatula HOM05D008268 ORTHO05D010144 2.4e-37 160.2 327 43.7
arahy.Tifrunner.gnm1.ann1.R70FHG Arachis hypogaea HOM05D008268 ORTHO05D010144 5.5e-37 159.1 323 41.2
QL08p017136 Quercus lobata HOM05D008268 ORTHO05D010144 5.5e-37 159.1 312 42.3
Duzib170G0253 Durio zibethinus HOM05D008268 ORTHO05D010144 7.1e-37 158.7 302 41.1
Cfa020486 Carpinus fangiana HOM05D008268 ORTHO05D010144 2.5e-34 150.2 337 38.9
Gohir.A01G069900 Gossypium hirsutum HOM05D008268 ORTHO05D010144 1.4e-32 144.4 311 39.5
Lalb_Chr20g0110041 Lupinus albus HOM05D008268 ORTHO05D010144 1.8e-32 144.1 131 61.8
Gohir.D01G057100 Gossypium hirsutum HOM05D008268 ORTHO05D010144 2.4e-32 143.7 309 39.2
Gorai.002G077500 Gossypium raimondii HOM05D008268 ORTHO05D010144 5.3e-32 142.5 309 39.2
Dinv22349 Davidia involucrata HOM05D008268 ORTHO05D010144 4.5e-31 139.4 319 39.8
TPR.G32855 Trifolium pratense HOM05D008268 ORTHO05D010144 7.6e-31 138.7 352 34.7
Prupe.4G192500 Prunus persica HOM05D008268 ORTHO05D010144 2.9e-30 136.7 368 36.7
Ca_01792_v3 Cicer arietinum L. HOM05D008268 ORTHO05D010144 5.5e-29 132.5 312 38.1
Dinv08361 Davidia involucrata HOM05D008268 ORTHO05D010144 3.9e-27 126.3 325 35.1
Manes.15G081401 Manihot esculenta HOM05D008268 ORTHO05D010144 1.3e-25 121.3 340 36.2
Duzib213G0412 Durio zibethinus HOM05D008268 ORTHO05D010144 3.7e-25 119.8 318 37.1
Cpa.g.sc12.16 Carica papaya HOM05D008268 ORTHO05D010144 6.3e-25 119.0 350 34.3
MD11G1234600 Malus domestica HOM05D008268 ORTHO05D010144 2.4e-24 117.1 367 33.2
Potri.001G409000 Populus trichocarpa HOM05D019858 ORTHO05D010144 6.9e-24 115.5 319 35.4
TAR626G0659 Trochodendron aralioides HOM05D008268 ORTHO05D010144 5.9e-23 112.5 340 34.4
Potri.011G125600 Populus trichocarpa HOM05D019858 ORTHO05D010144 7.6e-23 112.1 318 35.5
Haze_09553 Corylus avellana HOM05D008268 ORTHO05D010144 1.3e-22 111.3 313 36.1
Actinidia09966 Actinidia chinensis HOM05D008268 ORTHO05D010144 6.5e-22 109.0 296 36.5
Sabra16G0271800 Salix brachista HOM05D019858 ORTHO05D010144 1.1e-21 108.2 332 34.0
Sabra16G0276800 Salix brachista HOM05D019858 ORTHO05D010144 1.1e-21 108.2 332 34.0
Sabra11G0111900 Salix brachista HOM05D019858 ORTHO05D010144 1.4e-21 107.8 338 33.4
Lj3g0025864 Lotus japonicus HOM05D008268 ORTHO05D010144 4.2e-21 106.3 342 33.0
TWI38G2068 Tripterygium wilfordii HOM05D008268 ORTHO05D010144 1.1e-18 98.2 293 35.5
MD03G1216800 Malus domestica HOM05D008268 ORTHO05D010144 1.9e-18 97.4 381 31.8
CsaV3_3G044260 Cucumis sativus L. HOM05D008268 ORTHO05D010144 2.2e-17 94.0 306 33.0
ClCG11G018600 Citrullus lanatus HOM05D008268 ORTHO05D010144 6.3e-17 92.4 353 32.6
MELO3C018179.2 Cucumis melo HOM05D008268 ORTHO05D010144 1.1e-16 91.7 308 33.4
Nn1g06831 Nelumbo nucifera HOM05D008268 ORTHO05D010144 5.3e-16 89.4 358 29.6
Atru.chr2.2941 Acer truncatum HOM05D008268 ORTHO05D010144 1.2e-15 88.2 332 33.4
MBI02_g38752_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 4.5e-15 86.3 284 31.7
Oeu061273.1 Olea europaea HOM05D008268 ORTHO05D010144 1.3e-14 84.7 306 32.4
Lsat_1_v5_gn_0_5400 Lactuca sativa HOM05D008268 ORTHO05D010144 1.7e-14 84.3 309 31.1
MBI02_g46151_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 1.7e-14 84.3 284 31.3
Nitab4.5_0000297g0210 Nicotiana tabacum HOM05D015394 ORTHO05D017774 2.9e-14 83.6 338 30.2
THA.LOC104799901 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 1.4e-13 81.3 346 31.8
Nitab4.5_0001252g0050 Nicotiana tabacum HOM05D015394 ORTHO05D017774 1.9e-13 80.9 330 30.0
CANSAT11G1352 Cannabis sativa HOM05D008268 ORTHO05D010144 1.2e-12 78.2 375 28.3
SHI51816 Sapria himalayana HOM05D008268 ORTHO05D010144 1.2e-12 78.2 378 30.4
Nn1g03824 Nelumbo nucifera HOM05D008268 ORTHO05D010144 1.4e-11 74.7 295 30.8
Peaxi162Scf01216g00063 Petunia axillaris HOM05D015394 ORTHO05D017774 1.8e-11 74.3 370 29.2
Sed0023643 Sechium edule HOM05D008268 ORTHO05D010144 1.8e-11 74.3 288 28.1
Peaxi162Scf00000g07812 Petunia axillaris HOM05D015394 ORTHO05D017774 3.0e-11 73.6 318 28.9
FAN15G0243 Fragaria x ananassa HOM05D014484 ORTHO05D017021 3.9e-11 73.2 335 29.0
CSS0042196 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 5.1e-11 72.8 329 32.5
CSS0041304 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 6.7e-11 72.4 330 32.4
RhsimUnG0257100 Rhododendron simsii HOM05D047612 ORTHO05D010144 6.7e-11 72.4 324 32.1
GSVIVG01014468001 Vitis vinifera HOM05D008268 ORTHO05D010144 8.8e-11 72.0 182 37.4
THA.LOC104809278 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 2.6e-10 70.5 321 32.1
FAN27G0943 Fragaria x ananassa HOM05D014484 ORTHO05D017021 5.7e-10 69.3 375 27.7
Rhsim06G0192000 Rhododendron simsii HOM05D008268 ORTHO05D010144 5.7e-10 69.3 330 29.1
RhsimUnG0172800 Rhododendron simsii HOM05D047612 ORTHO05D010144 5.7e-10 69.3 323 31.9
CAN.G162.112 Capsicum annuum HOM05D015394 ORTHO05D017774 7.4e-10 68.9 322 28.0
COL.COLO4_09500 Corchorus olitorius HOM05D008268 ORTHO05D010144 1.3e-09 68.2 99 49.5
FvH4_2g05340 Fragaria vesca HOM05D014484 ORTHO05D017021 1.7e-09 67.8 340 28.5
FAN24G1810 Fragaria x ananassa HOM05D014484 ORTHO05D017021 1.7e-09 67.8 340 28.5
A03p57220 Brassica napus HOM05D010655 ORTHO05D012747 4.8e-09 66.2 286 30.8
BraA03t14788Z Brassica rapa HOM05D010655 ORTHO05D012747 1.8e-08 64.3 286 30.4
Eucgr.F01064 Eucalyptus grandis HOM05D008268 ORTHO05D010144 2.4e-08 63.9 79 49.4
RcHm_v2.0_Chr6g0255571 Rosa chinensis HOM05D014484 ORTHO05D017021 1.5e-07 61.2 350 26.9
Sabra15G0071800 Salix brachista HOM05D019858 ORTHO05D010144 3.4e-07 60.1 189 31.7
PGR083G1493 Punica granatum HOM05D008268 ORTHO05D010144 6.5e-06 55.8 171 35.1


User provided reference genes

Program Settings