Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G083100 Phaseolus vulgaris HOM05D005439 ORTHO05D006793 4.8e-61 237.7 120 100.0
Glyma.13G278900 Glycine max HOM05D005439 ORTHO05D006793 8.5e-42 173.7 127 70.1
VMungo1215G1396 Vigna mungo HOM05D005439 ORTHO05D006793 5.1e-39 164.5 86 95.3
Psat5g245080 Pisum sativum HOM05D005439 ORTHO05D006793 1.5e-38 162.9 129 65.1
Lalb_Chr20g0109751 Lupinus albus HOM05D005439 ORTHO05D006793 9.7e-38 160.2 139 64.7
Lj1g0010486 Lotus japonicus HOM05D005439 ORTHO05D006793 2.2e-37 159.1 133 66.2
Lj3g0027158 Lotus japonicus HOM05D005439 ORTHO05D006793 2.2e-37 159.1 131 65.6
TPR.G16054 Trifolium pratense HOM05D005439 ORTHO05D006793 8.2e-37 157.1 131 65.6
Medtr2g079590 Medicago truncatula HOM05D005439 ORTHO05D006793 7.0e-36 154.1 127 64.6
arahy.Tifrunner.gnm1.ann1.5K0R4Y Arachis hypogaea HOM05D005439 ORTHO05D006793 1.5e-35 152.9 167 50.9
CANSAT80G2923 Cannabis sativa HOM05D005439 ORTHO05D006793 1.4e-28 129.8 121 56.2
TPR.G39010 Trifolium pratense HOM05D005439 ORTHO05D006793 2.4e-28 129.0 74 82.4
arahy.Tifrunner.gnm1.ann1.KJ06EE Arachis hypogaea HOM05D005439 ORTHO05D006793 4.1e-28 128.3 220 37.7
CiPaw.08G146000 Carya illinoinensis HOM05D005439 ORTHO05D006793 7.0e-28 127.5 128 51.6
Dinv04318 Davidia involucrata HOM05D005439 ORTHO05D006793 7.0e-28 127.5 129 52.7
Haze_09469 Corylus avellana HOM05D005439 ORTHO05D006793 2.0e-27 125.9 143 46.9
CiPaw.12G120500 Carya illinoinensis HOM05D005439 ORTHO05D006793 2.6e-27 125.6 128 52.3
vmacro08610 Vaccinium macrocarpon HOM05D005439 ORTHO05D006793 8.5e-26 120.6 132 50.8
CSS0022813 Camellia sinensis var. sinensis HOM05D005439 ORTHO05D006793 1.5e-25 119.8 125 50.4
Rhsim04G0164900 Rhododendron simsii HOM05D005439 ORTHO05D006793 5.5e-25 117.9 129 49.6
TAR624G0176 Trochodendron aralioides HOM05D005439 ORTHO05D006793 5.5e-25 117.9 113 54.9
Dinv30229 Davidia involucrata HOM05D005439 ORTHO05D006793 7.2e-25 117.5 122 52.5
Thecc.07G077600 Theobroma cacao HOM05D005439 ORTHO05D006793 1.6e-24 116.3 134 50.7
Duzib170G0676 Durio zibethinus HOM05D005439 ORTHO05D006793 2.1e-24 115.9 129 51.2
Cc04_g05330 Coffea canephora HOM05D005439 ORTHO05D006793 2.7e-24 115.5 134 45.5
TAR626G0706 Trochodendron aralioides HOM05D005439 ORTHO05D006793 3.6e-24 115.2 123 53.7
Actinidia01110 Actinidia chinensis HOM05D005439 ORTHO05D006793 8.0e-24 114.0 122 51.6
Prupe.4G185100 Prunus persica HOM05D005439 ORTHO05D006793 8.0e-24 114.0 124 48.4
TWI15G0142 Tripterygium wilfordii HOM05D005439 ORTHO05D006793 8.0e-24 114.0 128 46.9
Gohir.A11G282786 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.0e-23 113.6 131 48.9
Gorai.007G319700 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.0e-23 113.6 131 48.9
Lsat_1_v5_gn_9_97181 Lactuca sativa HOM05D005439 ORTHO05D006793 1.0e-23 113.6 121 49.6
Gohir.D11G296600 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.4e-23 113.2 131 48.9
Peaxi162Scf00998g00023 Petunia axillaris HOM05D005439 ORTHO05D006793 1.4e-23 113.2 120 50.0
GSVIVG01014379001 Vitis vinifera HOM05D005439 ORTHO05D006793 1.4e-23 113.2 130 49.2
Gohir.A08G188900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.8e-23 112.8 131 48.1
Gohir.D08G040300 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.8e-23 112.8 131 48.1
Gohir.D10G173200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.8e-23 112.8 131 48.1
Gohir.D11G168400 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.8e-23 112.8 131 48.1
Gohir.D13G039100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.8e-23 112.8 131 48.1
Manes.15G085800 Manihot esculenta HOM05D005439 ORTHO05D006793 1.8e-23 112.8 127 48.8
Aqoxy1G02538 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 4.0e-23 111.7 130 46.9
Lsat_1_v5_gn_9_97261 Lactuca sativa HOM05D005439 ORTHO05D006793 4.0e-23 111.7 111 54.1
Gohir.A05G386100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 5.2e-23 111.3 131 47.3
RcHm_v2.0_Chr5g0034441 Rosa chinensis HOM05D005439 ORTHO05D006793 8.8e-23 110.5 125 46.4
Gohir.A11G204100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.2e-22 110.2 138 45.7
Gohir.A08G058200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.5e-22 109.8 131 47.3
MD03G1224300 Malus domestica HOM05D005439 ORTHO05D006793 2.6e-22 109.0 121 50.4
Gorai.013G039600 Gossypium raimondii HOM05D005439 ORTHO05D006793 4.4e-22 108.2 130 46.2
Nn1g04026 Nelumbo nucifera HOM05D005439 ORTHO05D006793 4.4e-22 108.2 138 44.9
Aqoxy6G01973 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 7.5e-22 107.5 130 46.9
AUR62034281 Chenopodium quinoa HOM05D005439 ORTHO05D006793 9.7e-22 107.1 128 43.0
HanXRQChr04g0095481 Helianthus annuus HOM05D005439 ORTHO05D006793 9.7e-22 107.1 120 47.5
Gorai.010G125600 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.3e-21 106.7 130 46.2
Gorai.013G217100 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.3e-21 106.7 130 46.2
COL.COLO4_09427 Corchorus olitorius HOM05D005439 ORTHO05D006793 2.8e-21 105.5 126 48.4
Nitab4.5_0003769g0120 Nicotiana tabacum HOM05D005439 ORTHO05D006793 3.7e-21 105.1 118 46.6
Gorai.012G015600 Gossypium raimondii HOM05D005439 ORTHO05D006793 6.3e-21 104.4 130 44.6
CAN.G162.72 Capsicum annuum HOM05D005439 ORTHO05D006793 8.3e-21 104.0 118 49.2
Oeu037221.1 Olea europaea HOM05D005439 ORTHO05D006793 1.4e-20 103.2 128 48.4
RcHm_v2.0_Chr6g0279991 Rosa chinensis HOM05D005439 ORTHO05D006793 1.4e-20 103.2 126 44.4
FAN14G2189 Fragaria x ananassa HOM05D005439 ORTHO05D006793 1.8e-20 102.8 128 44.5
PSO675G4650 Papaver somniferum HOM05D005439 ORTHO05D006793 2.4e-20 102.4 135 45.2
Cpa.g.sc53.123 Carica papaya HOM05D005439 ORTHO05D006793 5.3e-20 101.3 114 48.2
PGSC0003DMG400001562 Solanum tuberosum HOM05D005439 ORTHO05D006793 5.3e-20 101.3 128 46.1
DCAR_000742 Daucus carota HOM05D005439 ORTHO05D006793 1.2e-19 100.1 112 49.1
Sopen07g031460 Solanum pennellii HOM05D005439 ORTHO05D006793 5.9e-19 97.8 128 45.3
ECA240G1812 Erigeron canadensis HOM05D005439 ORTHO05D006793 7.7e-19 97.4 126 44.4
QL08p019954 Quercus lobata HOM05D005439 ORTHO05D006793 7.7e-19 97.4 72 66.7
ATR0019G055 Amborella trichopoda HOM05D005439 ORTHO05D006793 1.0e-18 97.1 123 43.9
EL10Ac4g09544 Beta vulgaris HOM05D005439 ORTHO05D006793 1.0e-18 97.1 128 39.1
Eucgr.I00444 Eucalyptus grandis HOM05D005439 ORTHO05D006793 1.0e-18 97.1 128 46.9
PGSC0003DMG400012454 Solanum tuberosum HOM05D005439 ORTHO05D006793 1.0e-18 97.1 128 44.5
Sabra11G0107800 Salix brachista HOM05D005439 ORTHO05D006793 2.2e-18 95.9 137 39.4
Potri.011G121800 Populus trichocarpa HOM05D005439 ORTHO05D006793 2.9e-18 95.5 132 40.2
Ciclev10009838m.g Citrus clementina HOM05D005439 ORTHO05D006793 5.0e-18 94.7 96 50.0
ClCG11G007090 Citrullus lanatus HOM05D005439 ORTHO05D006793 1.9e-17 92.8 120 45.0
Gohir.A03G006900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.5e-17 92.4 111 47.7
Solyc07g063290.3 Solanum lycopersicum HOM05D005439 ORTHO05D006793 3.2e-17 92.0 127 44.1
Gohir.D09G236700 Gossypium hirsutum HOM05D005439 ORTHO05D006793 5.5e-17 91.3 79 55.7
AUR62042910 Chenopodium quinoa HOM05D005439 ORTHO05D006793 7.2e-17 90.9 135 37.8
Gorai.007G117500 Gossypium raimondii HOM05D005439 ORTHO05D006793 4.7e-16 88.2 74 56.8
PSO541G3703 Papaver somniferum HOM05D005439 ORTHO05D006793 1.2e-14 83.6 97 48.5
Hund22944 Selenicereus undatus HOM05D005439 ORTHO05D006793 3.4e-14 82.0 125 37.6
MELO3C008192.2 Cucumis melo HOM05D005439 ORTHO05D006793 5.7e-14 81.3 126 42.9
Nitab4.5_0010521g0020 Nicotiana tabacum HOM05D005439 ORTHO05D006793 9.8e-14 80.5 107 42.1
Atru.chr2.2728 Acer truncatum HOM05D005439 ORTHO05D006793 6.3e-13 77.8 122 41.0
Atru.chr2.2729 Acer truncatum HOM05D005439 ORTHO05D006793 6.3e-13 77.8 122 41.0
Sed0007807 Sechium edule HOM05D005439 ORTHO05D006793 1.1e-12 77.0 116 39.7
CDE08G1297 Ceratophyllum demersum HOM05D005439 ORTHO05D006793 1.4e-12 76.6 67 61.2
PGR031G3442 Punica granatum HOM05D005439 ORTHO05D006793 1.8e-12 76.3 122 43.4
MBI18_g17006_MAGBIO Magnolia biondii HOM05D005439 ORTHO05D006793 1.6e-11 73.2 117 37.6
Eucgr.L03232 Eucalyptus grandis HOM05D005439 ORTHO05D006793 2.0e-11 72.8 71 53.5
Sc18g0002800 Simmondsia chinensis HOM05D005439 ORTHO05D006793 2.0e-11 72.8 122 37.7
Migut.H01926 Erythranthe guttata HOM05D005439 ORTHO05D006793 2.7e-11 72.4 122 38.5
THA.LOC104815550 Tarenaya hassleriana HOM05D005439 ORTHO05D006793 2.7e-11 72.4 117 40.2
C02p08370 Brassica napus HOM05D005439 ORTHO05D006793 5.9e-11 71.2 126 34.9
BolC2t06755H Brassica oleracea HOM05D005439 ORTHO05D006793 5.9e-11 71.2 126 34.9
Sed0010430 Sechium edule HOM05D005439 ORTHO05D006793 7.7e-11 70.9 92 42.4
CARHR090470 Cardamine hirsuta HOM05D005439 ORTHO05D006793 1.0e-10 70.5 125 35.2
A02p03560 Brassica napus HOM05D005439 ORTHO05D006793 1.7e-10 69.7 125 32.8
BraA02t05327Z Brassica rapa HOM05D005439 ORTHO05D006793 2.9e-10 68.9 115 33.9
BcaB08g36849 Brassica carinata HOM05D005439 ORTHO05D006793 3.8e-10 68.6 114 34.2
unitig_32.g11156 Utricularia gibba HOM05D005439 ORTHO05D006793 8.6e-10 67.4 113 35.4
Aa31LG8G2660 Aethionema arabicum HOM05D005439 ORTHO05D006793 1.1e-09 67.0 129 33.3
RcHm_v2.0_Chr2g0143371 Rosa chinensis HOM05D005439 ORTHO05D006793 1.5e-09 66.6 85 43.5
Mapoly0076s0011 Marchantia polymorpha HOM05D005439 ORTHO05D006793 4.2e-09 65.1 118 38.1
Sp6g27700 Schrenkiella parvula HOM05D005439 ORTHO05D006793 5.5e-09 64.7 127 30.7
C09p60700 Brassica napus HOM05D005439 ORTHO05D006793 7.2e-09 64.3 114 32.5
Carub.0003s1515 Capsella rubella HOM05D005439 ORTHO05D006793 7.2e-09 64.3 112 37.5
AT1G80745 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 1.2e-08 63.5 110 34.5
AT3G15420 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 1.2e-08 63.5 109 35.8
HPP92_001754 Vanilla planifolia HOM05D005439 ORTHO05D006793 2.8e-08 62.4 110 37.3
AL3G27970 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 3.6e-08 62.0 109 33.9
SalBow7G3564 Salvia bowleyana HOM05D005439 ORTHO05D006793 1.0e-07 60.5 115 37.4
Thhalv10021755m.g Eutrema salsugineum HOM05D005439 ORTHO05D006793 1.4e-07 60.1 107 34.6
AL2G40660 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 2.3e-07 59.3 114 35.1
RcHm_v2.0_Chr5g0034431 Rosa chinensis HOM05D005439 ORTHO05D006793 8.9e-07 57.4 51 51.0
Os04g0530000 Oryza sativa ssp. japonica HOM05D005439 ORTHO05D006793 1.5e-06 56.6 113 35.4
SGA_v2.0_scaffold4G02008 Striga asiatica HOM05D000346 ORTHO05D000326 2.0e-06 56.2 51 52.9
BcaC03g18493 Brassica carinata HOM05D005439 ORTHO05D006793 2.6e-06 55.8 90 33.3
Zm00001eb403870 Zea mays HOM05D005439 ORTHO05D006793 2.6e-06 55.8 113 34.5
FAN09G3549 Fragaria x ananassa HOM05D005439 ORTHO05D006793 7.5e-06 54.3 51 47.1


User provided reference genes

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