Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G081700 Phaseolus vulgaris HOM05D008148 ORTHO05D010295 7.0e-28 126.7 71 100.0
Glyma.13G269300 Glycine max HOM05D008148 ORTHO05D010295 8.3e-21 103.2 71 74.6
Glyma.12G230300 Glycine max HOM05D008148 ORTHO05D010295 7.8e-19 96.7 71 71.8
Ca_03959_v3 Cicer arietinum L. HOM05D008148 ORTHO05D010295 8.1e-16 86.7 71 60.6
Psat5g237240 Pisum sativum HOM05D008148 ORTHO05D010295 3.1e-15 84.7 73 58.9
TPR.G16053 Trifolium pratense HOM05D008148 ORTHO05D010295 3.1e-15 84.7 74 58.1
Medtr2g076020 Medicago truncatula HOM05D008148 ORTHO05D010295 1.2e-14 82.8 73 58.9
Lj3g0020996 Lotus japonicus HOM05D008148 ORTHO05D010295 3.4e-14 81.3 71 59.2
Lalb_Chr25g0285821 Lupinus albus HOM05D008148 ORTHO05D010295 9.9e-14 79.7 71 53.5
arahy.Tifrunner.gnm1.ann1.MJJR0W Arachis hypogaea HOM05D008148 ORTHO05D010295 5.4e-12 73.9 44 68.2
arahy.Tifrunner.gnm1.ann1.GBF3HF Arachis hypogaea HOM05D008148 ORTHO05D010295 1.2e-11 72.8 44 65.9
MELO3C025654.2 Cucumis melo HOM05D008148 ORTHO05D010295 3.9e-10 67.8 44 61.4
FAN11G2091 Fragaria x ananassa HOM05D008148 ORTHO05D010295 5.1e-10 67.4 42 64.3
Prupe.4G164100 Prunus persica HOM05D008148 ORTHO05D010295 6.6e-10 67.0 44 59.1
Eucgr.F03276 Eucalyptus grandis HOM05D008148 ORTHO05D010295 8.6e-10 66.6 44 63.6
RcHm_v2.0_Chr5g0030781 Rosa chinensis HOM05D008148 ORTHO05D010295 2.5e-09 65.1 42 57.1
Sabra11G0096700 Salix brachista HOM05D008148 ORTHO05D010295 2.5e-09 65.1 45 60.0
CiPaw.11G159800 Carya illinoinensis HOM05D008148 ORTHO05D010295 3.3e-09 64.7 44 56.8
THA.LOC104812318 Tarenaya hassleriana HOM05D008148 ORTHO05D010295 4.3e-09 64.3 40 62.5
CsaV3_4G032950 Cucumis sativus L. HOM05D008148 ORTHO05D010295 5.6e-09 63.9 44 59.1
Duzib213G0597 Durio zibethinus HOM05D008148 ORTHO05D010295 7.3e-09 63.5 44 61.4
Prupe.4G163600 Prunus persica HOM05D008148 ORTHO05D010295 7.3e-09 63.5 44 56.8
Thecc.07G117800 Theobroma cacao HOM05D008148 ORTHO05D010295 7.3e-09 63.5 44 61.4
FAN21G2680 Fragaria x ananassa HOM05D008148 ORTHO05D010295 9.5e-09 63.2 42 57.1
Sc03g0010550 Simmondsia chinensis HOM05D008148 ORTHO05D010295 9.5e-09 63.2 44 61.4
Actinidia12583 Actinidia chinensis HOM05D008148 ORTHO05D010295 1.2e-08 62.8 46 54.3
MD11G1264400 Malus domestica HOM05D008148 ORTHO05D010295 2.1e-08 62.0 42 57.1
Cpa.g.sc77.20 Carica papaya HOM05D008148 ORTHO05D010295 3.6e-08 61.2 42 59.5
PGR031G2401 Punica granatum HOM05D008148 ORTHO05D010295 3.6e-08 61.2 59 45.8
Carub.0001s1665 Capsella rubella HOM05D008148 ORTHO05D010295 4.7e-08 60.8 65 43.1
Sed0019666 Sechium edule HOM05D008148 ORTHO05D010295 4.7e-08 60.8 44 56.8
Potri.011G109100 Populus trichocarpa HOM05D008148 ORTHO05D010295 6.2e-08 60.5 45 57.8
AL1G29090 Arabidopsis lyrata HOM05D008148 ORTHO05D010295 1.1e-07 59.7 37 59.5
AT1G16916 Arabidopsis thaliana HOM05D008148 ORTHO05D010295 1.1e-07 59.7 37 59.5
Sp1g15050 Schrenkiella parvula HOM05D008148 ORTHO05D010295 1.8e-07 58.9 37 56.8
Thhalv10009282m.g Eutrema salsugineum HOM05D008148 ORTHO05D010295 2.4e-07 58.5 37 56.8
COL.COLO4_17536 Corchorus olitorius HOM05D008148 ORTHO05D010295 4.0e-07 57.8 44 54.5
Gohir.A01G053800 Gossypium hirsutum HOM05D008148 ORTHO05D010295 4.0e-07 57.8 44 54.5
Gohir.D01G042712 Gossypium hirsutum HOM05D008148 ORTHO05D010295 4.0e-07 57.8 44 54.5
Gorai.002G054100 Gossypium raimondii HOM05D008148 ORTHO05D010295 4.0e-07 57.8 44 54.5
Manes.15G095500 Manihot esculenta HOM05D008148 ORTHO05D010295 4.0e-07 57.8 41 58.5
ClCG11G017320 Citrullus lanatus HOM05D008148 ORTHO05D010295 6.8e-07 57.0 44 52.3
FAN25G0037 Fragaria x ananassa HOM05D008148 ORTHO05D010295 6.8e-07 57.0 45 53.3
SalBow6G6640 Salvia bowleyana HOM05D008148 ORTHO05D010295 6.8e-07 57.0 40 57.5
SalBow7G3203 Salvia bowleyana HOM05D008148 ORTHO05D010295 6.8e-07 57.0 40 57.5
Atru.chr2.2119 Acer truncatum HOM05D008148 ORTHO05D010295 8.9e-07 56.6 44 54.5
CARHR017420 Cardamine hirsuta HOM05D008148 ORTHO05D010295 3.4e-06 54.7 37 54.1
GSVIVG01014187001 Vitis vinifera HOM05D008148 ORTHO05D010295 3.4e-06 54.7 40 52.5
BcaC07g41389 Brassica carinata HOM05D008148 ORTHO05D010295 4.4e-06 54.3 34 58.8
A09p60700 Brassica napus HOM05D008148 ORTHO05D010295 4.4e-06 54.3 34 58.8
C08p44200 Brassica napus HOM05D008148 ORTHO05D010295 4.4e-06 54.3 34 58.8
BraA09t41440Z Brassica rapa HOM05D008148 ORTHO05D010295 4.4e-06 54.3 34 58.8
Migut.M00719 Erythranthe guttata HOM05D008148 ORTHO05D010295 7.6e-06 53.5 33 63.6
Oeu059259.1 Olea europaea HOM05D008148 ORTHO05D010295 9.9e-06 53.1 34 58.8
SHI27618 Sapria himalayana HOM05D008148 ORTHO05D010295 9.9e-06 53.1 44 54.5


User provided reference genes

Program Settings