Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G072700 Phaseolus vulgaris HOM05D003240 ORTHO05D009426 3.0e-63 245.4 121 100.0
VMungo1080G0324 Vigna mungo HOM05D003240 ORTHO05D009426 2.7e-51 205.7 123 83.7
Glyma.12G225100 Glycine max HOM05D003240 ORTHO05D009426 1.0e-50 203.8 122 83.6
Lj3g0021284 Lotus japonicus HOM05D003240 ORTHO05D009426 1.1e-41 173.7 123 73.2
Glyma.13G276200 Glycine max HOM05D003240 ORTHO05D009426 7.3e-33 144.4 122 66.4
Medtr2g085370 Medicago truncatula HOM05D003240 ORTHO05D009426 9.5e-33 144.1 124 66.1
Haze_09433 Corylus avellana HOM05D003240 ORTHO05D009426 4.9e-29 131.7 121 57.9
Haze_09435 Corylus avellana HOM05D003240 ORTHO05D009426 6.4e-29 131.3 121 58.7
Potri.001G399200 Populus trichocarpa HOM05D003240 ORTHO05D009426 5.4e-28 128.3 122 54.9
Manes.15G087500 Manihot esculenta HOM05D003240 ORTHO05D009426 7.1e-28 127.9 120 55.8
TPR.G38961 Trifolium pratense HOM05D003240 ORTHO05D009426 1.2e-27 127.1 114 61.4
Potri.011G118600 Populus trichocarpa HOM05D003240 ORTHO05D009426 1.6e-27 126.7 120 57.5
Cfa020576 Carpinus fangiana HOM05D003240 ORTHO05D009426 4.6e-27 125.2 114 59.6
Sabra16G0261800 Salix brachista HOM05D003240 ORTHO05D009426 2.3e-26 122.9 119 52.1
MD03G1228400 Malus domestica HOM05D003240 ORTHO05D009426 3.9e-26 122.1 123 55.3
TWI38G1889 Tripterygium wilfordii HOM05D003240 ORTHO05D009426 3.9e-26 122.1 123 52.0
Oeu019313.1 Olea europaea HOM05D003240 ORTHO05D009426 1.1e-25 120.6 121 54.5
Prupe.4G180300 Prunus persica HOM05D003240 ORTHO05D009426 2.5e-25 119.4 122 56.6
Lj3g0010365 Lotus japonicus HOM05D003240 ORTHO05D009426 4.3e-25 118.6 121 52.9
CiPaw.12G118800 Carya illinoinensis HOM05D003240 ORTHO05D009426 1.6e-24 116.7 130 50.0
Eucgr.F01147 Eucalyptus grandis HOM05D003240 ORTHO05D009426 8.1e-24 114.4 125 48.8
Hma1.2p1_0458F.1_g157060 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 8.9e-23 110.9 121 47.9
RcHm_v2.0_Chr5g0033251 Rosa chinensis HOM05D003240 ORTHO05D009426 8.9e-23 110.9 120 49.2
FvH4_3g19820 Fragaria vesca HOM05D003240 ORTHO05D009426 3.4e-22 109.0 121 47.9
Sabra11G0103500 Salix brachista HOM05D003240 ORTHO05D009426 3.4e-22 109.0 121 52.1
FAN25G3490 Fragaria x ananassa HOM05D003240 ORTHO05D009426 4.4e-22 108.6 121 47.9
TPR.G39028 Trifolium pratense HOM05D003240 ORTHO05D009426 4.4e-22 108.6 120 50.0
FAN16G0971 Fragaria x ananassa HOM05D003240 ORTHO05D009426 5.8e-22 108.2 121 47.9
Ciclev10010456m.g Citrus clementina HOM05D003240 ORTHO05D009426 7.6e-22 107.8 112 50.0
Nitab4.5_0001336g0090 Nicotiana tabacum HOM05D003240 ORTHO05D009426 7.6e-22 107.8 120 47.5
Atru.chr2.2486 Acer truncatum HOM05D003240 ORTHO05D009426 9.9e-22 107.5 138 48.6
FAN21G1097 Fragaria x ananassa HOM05D003240 ORTHO05D009426 9.9e-22 107.5 121 47.9
Cfa020578 Carpinus fangiana HOM05D003240 ORTHO05D009426 1.3e-21 107.1 109 51.4
PGR083G0779 Punica granatum HOM05D003240 ORTHO05D009426 8.4e-21 104.4 126 50.0
Nitab4.5_0001241g0070 Nicotiana tabacum HOM05D003240 ORTHO05D009426 1.1e-20 104.0 122 46.7
Medtr2g085360 Medicago truncatula HOM05D003240 ORTHO05D009426 4.2e-20 102.1 122 46.7
Migut.M00801 Erythranthe guttata HOM05D003240 ORTHO05D009426 5.4e-20 101.7 129 50.4
Hma1.2p1_0898F.1_g234470 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 5.4e-20 101.7 120 50.8
Prupe.4G180400 Prunus persica HOM05D003240 ORTHO05D009426 5.4e-20 101.7 116 47.4
MBI07_g30192_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 9.3e-20 100.9 116 51.7
Hma1.2p1_0458F.1_g157080 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 1.2e-19 100.5 120 47.5
Dinv14922 Davidia involucrata HOM05D003240 ORTHO05D009426 1.6e-19 100.1 120 45.0
Cpa.g.sc80.73 Carica papaya HOM05D003240 ORTHO05D009426 2.1e-19 99.8 79 62.0
Hma1.2p1_0458F.1_g157090 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 2.1e-19 99.8 83 59.0
CAN.G162.53 Capsicum annuum HOM05D003240 ORTHO05D009426 3.5e-19 99.0 125 47.2
Lalb_Chr03g0042631 Lupinus albus HOM05D003240 ORTHO05D009426 4.6e-19 98.6 117 49.6
Cc05_g11970 Coffea canephora HOM05D003240 ORTHO05D009426 6.0e-19 98.2 121 47.9
DCAR_017136 Daucus carota HOM05D003240 ORTHO05D009426 7.8e-19 97.8 121 46.3
Gohir.A04G031760 Gossypium hirsutum HOM05D003240 ORTHO05D009426 7.8e-19 97.8 87 58.6
Gohir.A04G031920 Gossypium hirsutum HOM05D003240 ORTHO05D009426 7.8e-19 97.8 87 58.6
Gohir.D05G352600 Gossypium hirsutum HOM05D003240 ORTHO05D009426 7.8e-19 97.8 87 58.6
Duzib213G1023 Durio zibethinus HOM05D003240 ORTHO05D009426 1.0e-18 97.4 129 48.1
Gorai.009G384700 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.0e-18 97.4 87 58.6
Aa31LG10G2000 Aethionema arabicum HOM05D003240 ORTHO05D009426 2.3e-18 96.3 122 45.9
Gorai.009G385100 Gossypium raimondii HOM05D003240 ORTHO05D009426 2.3e-18 96.3 89 56.2
AT1G53130 Arabidopsis thaliana HOM05D003240 ORTHO05D009426 3.0e-18 95.9 128 41.4
DCAR_013111 Daucus carota HOM05D003240 ORTHO05D009426 3.9e-18 95.5 79 57.0
CSS0038111 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 6.6e-18 94.7 121 48.8
Aqoxy1G02389 Aquilegia oxysepala HOM05D003240 ORTHO05D009426 8.7e-18 94.4 125 45.6
CSS0044584 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 8.7e-18 94.4 121 48.8
AL1G61490 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 1.9e-17 93.2 128 44.5
Thhalv10012399m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 1.9e-17 93.2 127 43.3
Sp1g39680 Schrenkiella parvula HOM05D003240 ORTHO05D009426 1.9e-17 93.2 127 43.3
BcaB07g33356 Brassica carinata HOM05D003240 ORTHO05D009426 2.5e-17 92.8 130 42.3
Thecc.07G091300 Theobroma cacao HOM05D003240 ORTHO05D009426 2.5e-17 92.8 129 46.5
Sp3g13510 Schrenkiella parvula HOM05D003240 ORTHO05D009426 3.3e-17 92.4 124 41.1
Carub.0001s4229 Capsella rubella HOM05D003240 ORTHO05D009426 4.3e-17 92.0 127 42.5
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 4.3e-17 92.0 88 53.4
Sopen07g031280 Solanum pennellii HOM05D003240 ORTHO05D009426 5.6e-17 91.7 121 45.5
CARHR043350 Cardamine hirsuta HOM05D003240 ORTHO05D009426 7.3e-17 91.3 128 39.8
COL.COLO4_27180 Corchorus olitorius HOM05D003240 ORTHO05D009426 9.6e-17 90.9 134 42.5
Gohir.D05G352700 Gossypium hirsutum HOM05D003240 ORTHO05D009426 9.6e-17 90.9 126 46.0
Gorai.009G384900 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.3e-16 90.5 129 47.3
PGSC0003DMG400012465 Solanum tuberosum HOM05D003240 ORTHO05D009426 1.6e-16 90.1 122 45.9
CANSAT56G1752 Cannabis sativa HOM05D003240 ORTHO05D009426 2.1e-16 89.7 157 39.5
Thhalv10022293m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 2.1e-16 89.7 125 40.0
A06p01190 Brassica napus HOM05D003240 ORTHO05D009426 2.8e-16 89.4 127 42.5
BraA06t23346Z Brassica rapa HOM05D003240 ORTHO05D009426 2.8e-16 89.4 127 42.5
Nn1g06519 Nelumbo nucifera HOM05D003240 ORTHO05D009426 2.8e-16 89.4 120 45.0
BcaC08g43498 Brassica carinata HOM05D003240 ORTHO05D009426 3.6e-16 89.0 127 41.7
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 3.6e-16 89.0 127 41.7
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 3.6e-16 89.0 127 41.7
SGA_v2.0_scaffold73G24260 Striga asiatica HOM05D003240 ORTHO05D009426 1.4e-15 87.0 68 63.2
THA.LOC104818082 Tarenaya hassleriana HOM05D003240 ORTHO05D009426 1.4e-15 87.0 122 41.0
Gohir.D05G352500 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.8e-15 86.7 129 45.0
Gorai.009G384600 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.8e-15 86.7 129 45.0
Gorai.009G385000 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.8e-15 86.7 75 56.0
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 2.4e-15 86.3 96 46.9
Gohir.A04G032000 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.1e-15 85.9 129 45.0
AL3G27700 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 4.0e-15 85.5 124 39.5
Gohir.A04G032100 Gossypium hirsutum HOM05D003240 ORTHO05D009426 5.3e-15 85.1 129 45.0
BcaC09g48486 Brassica carinata HOM05D003240 ORTHO05D009426 2.0e-14 83.2 111 44.1
BcaNung07375 Brassica carinata HOM05D003240 ORTHO05D009426 2.6e-14 82.8 56 58.9
Carub.0003s1496 Capsella rubella HOM05D003240 ORTHO05D009426 4.4e-14 82.0 120 44.2
ATR0737G149 Amborella trichopoda HOM05D003240 ORTHO05D009426 5.8e-14 81.6 62 61.3
Nn4g25258 Nelumbo nucifera HOM05D003240 ORTHO05D009426 3.8e-13 79.0 120 42.5
TAR627G0347 Trochodendron aralioides HOM05D003240 ORTHO05D009426 6.4e-13 78.2 84 48.8
unitig_37.g12571 Utricularia gibba HOM05D003240 ORTHO05D009426 3.0e-10 69.3 63 49.2
PSO541G3864 Papaver somniferum HOM05D003240 ORTHO05D009426 1.5e-09 67.0 122 36.1
PSO675G7736 Papaver somniferum HOM05D003240 ORTHO05D009426 1.5e-09 67.0 92 39.1
Rhsim06G0199500 Rhododendron simsii HOM05D003240 ORTHO05D009426 4.8e-08 62.0 130 31.5
Nn1g04123 Nelumbo nucifera HOM05D003240 ORTHO05D009426 6.9e-07 58.2 120 35.8
Solyc02g036240.1 Solanum lycopersicum HOM05D002014 ORTHO05D001958 4.5e-06 55.5 67 41.8


User provided reference genes

Program Settings