Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G071300 Phaseolus vulgaris HOM05D010313 ORTHO05D012614 3.8e-40 167.5 76 100.0
Glyma.13G278000 Glycine max HOM05D010313 ORTHO05D012614 3.7e-35 151.0 76 90.8
Phvul.005G071400 Phaseolus vulgaris HOM05D010313 ORTHO05D012614 4.9e-35 150.6 76 86.8
arahy.Tifrunner.gnm1.ann1.L4FE7K Arachis hypogaea HOM05D010313 ORTHO05D012614 1.1e-31 139.4 76 78.9
Medtr2g079440 Medicago truncatula HOM05D010313 ORTHO05D012614 2.2e-27 125.2 76 77.6
Psat3g101040 Pisum sativum HOM05D010313 ORTHO05D012614 6.4e-27 123.6 76 75.0
arahy.Tifrunner.gnm1.ann1.JLL9S1 Arachis hypogaea HOM05D010313 ORTHO05D012614 4.1e-26 120.9 76 72.4
Medtr2g079430 Medicago truncatula HOM05D010313 ORTHO05D012614 5.4e-26 120.6 76 73.7
Psat5g242600 Pisum sativum HOM05D010313 ORTHO05D012614 9.2e-26 119.8 76 69.7
TPR.G30216 Trifolium pratense HOM05D010313 ORTHO05D012614 3.9e-24 114.4 76 75.0
TPR.G38999 Trifolium pratense HOM05D010313 ORTHO05D012614 1.1e-23 112.8 72 70.8
arahy.Tifrunner.gnm1.ann1.2P4AZJ Arachis hypogaea HOM05D010313 ORTHO05D012614 1.9e-23 112.1 76 65.8
arahy.Tifrunner.gnm1.ann1.IQ5AU2 Arachis hypogaea HOM05D010313 ORTHO05D012614 1.9e-23 112.1 76 65.8
Psat5g242400 Pisum sativum HOM05D010313 ORTHO05D012614 4.3e-23 110.9 76 71.1
Psat5g242640 Pisum sativum HOM05D010313 ORTHO05D012614 9.5e-23 109.8 76 68.4
Psat0s5174g0040 Pisum sativum HOM05D010313 ORTHO05D012614 1.6e-22 109.0 76 71.1
Psat5g242440 Pisum sativum HOM05D010313 ORTHO05D012614 1.6e-22 109.0 76 71.1
arahy.Tifrunner.gnm1.ann1.DML5UT Arachis hypogaea HOM05D010313 ORTHO05D012614 2.2e-19 98.6 76 60.5
Medtr6g075430 Medicago truncatula HOM05D010313 ORTHO05D012614 3.6e-14 81.3 86 51.2
TPR.G36456 Trifolium pratense HOM05D010313 ORTHO05D012614 1.2e-12 76.3 39 79.5
Medtr2g030315 Medicago truncatula HOM05D010313 ORTHO05D012614 7.6e-12 73.6 78 51.3
Potri.T011300 Populus trichocarpa HOM05D001231 ORTHO05D001012 2.3e-08 62.0 77 44.2
Potri.T011301 Populus trichocarpa HOM05D001231 ORTHO05D001012 2.3e-08 62.0 77 44.2
PGR102G0532 Punica granatum HOM05D001231 ORTHO05D001012 1.5e-07 59.3 77 40.3
Sopen04g003620 Solanum pennellii HOM05D001231 ORTHO05D001012 1.9e-07 58.9 72 44.4
Prupe.1G201200 Prunus persica HOM05D001231 ORTHO05D001012 3.3e-07 58.2 77 37.7
CiPaw.04G178300 Carya illinoinensis HOM05D001231 ORTHO05D001012 4.3e-07 57.8 77 41.6
Ciclev10029711m.g Citrus clementina HOM05D002484 ORTHO05D002541 4.3e-07 57.8 71 42.3
MD00G1135500 Malus domestica HOM05D001231 ORTHO05D001012 5.6e-07 57.4 77 39.0
Thecc.04G140800 Theobroma cacao HOM05D001231 ORTHO05D001012 5.6e-07 57.4 74 39.2
QL10p038692 Quercus lobata HOM05D001231 ORTHO05D001012 7.3e-07 57.0 76 40.8
Sc14g0001860 Simmondsia chinensis HOM05D002484 ORTHO05D002541 1.6e-06 55.8 70 42.9
CiPaw.04G178400 Carya illinoinensis HOM05D001231 ORTHO05D001012 2.1e-06 55.5 77 37.7
TWI75G0548 Tripterygium wilfordii HOM05D001231 ORTHO05D001012 2.1e-06 55.5 74 39.2
Sc14g0001850 Simmondsia chinensis HOM05D002484 ORTHO05D002541 3.6e-06 54.7 70 41.4
Thecc.04G141100 Theobroma cacao HOM05D001231 ORTHO05D001012 4.7e-06 54.3 74 36.5
Actinidia36588 Actinidia chinensis HOM05D001231 ORTHO05D001012 6.2e-06 53.9 77 37.7
Potri.004G138100 Populus trichocarpa HOM05D001231 ORTHO05D001012 6.2e-06 53.9 77 41.6
Nitab4.5_0004431g0020 Nicotiana tabacum HOM05D001231 ORTHO05D001012 8.1e-06 53.5 78 38.5


User provided reference genes

Program Settings