Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G069100 Phaseolus vulgaris HOM05D007274 ORTHO05D009194 3.9e-31 137.5 69 100.0
Phvul.011G086800 Phaseolus vulgaris HOM05D007274 ORTHO05D009194 3.9e-31 137.5 69 100.0
Glyma.12G082200 Glycine max HOM05D007274 ORTHO05D009194 4.7e-29 130.6 69 94.2
Psat7g223680 Pisum sativum HOM05D007274 ORTHO05D009194 6.4e-26 120.2 68 86.8
TPR.G36741 Trifolium pratense HOM05D007274 ORTHO05D009194 2.4e-25 118.2 68 83.8
Medtr4g057190 Medicago truncatula HOM05D007274 ORTHO05D009194 5.4e-25 117.1 68 82.4
arahy.Tifrunner.gnm1.ann1.BZT54Z Arachis hypogaea HOM05D007274 ORTHO05D009194 2.1e-24 115.2 62 88.7
arahy.Tifrunner.gnm1.ann1.F7FWRZ Arachis hypogaea HOM05D007274 ORTHO05D009194 2.1e-24 115.2 62 88.7
Lj3g0015703 Lotus japonicus HOM05D007274 ORTHO05D009194 2.7e-24 114.8 68 82.4
Lalb_Chr19g0136881 Lupinus albus HOM05D007274 ORTHO05D009194 2.7e-24 114.8 68 77.9
Ca_10763_v3 Cicer arietinum L. HOM05D007274 ORTHO05D009194 1.3e-23 112.5 68 79.4
CANSAT64G0704 Cannabis sativa HOM05D007274 ORTHO05D009194 2.3e-23 111.7 62 83.9
Glyma.11G192200 Glycine max HOM05D007274 ORTHO05D009194 2.3e-23 111.7 69 85.5
MD03G1128500 Malus domestica HOM05D007274 ORTHO05D009194 5.1e-23 110.5 68 79.4
Cpa.g.sc47.5 Carica papaya HOM05D007274 ORTHO05D009194 6.6e-23 110.2 62 85.5
Aa31LG1G12850 Aethionema arabicum HOM05D007274 ORTHO05D009194 8.6e-23 109.8 68 79.4
Prupe.6G113700 Prunus persica HOM05D007274 ORTHO05D009194 8.6e-23 109.8 62 87.1
BcaB05g22677 Brassica carinata HOM05D007274 ORTHO05D009194 1.1e-22 109.4 62 83.9
BcaB08g36400 Brassica carinata HOM05D007274 ORTHO05D009194 1.1e-22 109.4 62 83.9
BcaC04g19606 Brassica carinata HOM05D007274 ORTHO05D009194 1.1e-22 109.4 62 83.9
C09p53770 Brassica napus HOM05D007274 ORTHO05D009194 1.1e-22 109.4 62 83.9
BolC9t58252H Brassica oleracea HOM05D007274 ORTHO05D009194 1.1e-22 109.4 62 83.9
CARHR190660 Cardamine hirsuta HOM05D007274 ORTHO05D009194 1.1e-22 109.4 62 83.9
Thhalv10015213m.g Eutrema salsugineum HOM05D007274 ORTHO05D009194 1.1e-22 109.4 62 83.9
Sp6g22530 Schrenkiella parvula HOM05D007274 ORTHO05D009194 1.1e-22 109.4 62 83.9
CiPaw.14G106900 Carya illinoinensis HOM05D007274 ORTHO05D009194 1.5e-22 109.0 68 76.5
ClCG02G021670 Citrullus lanatus HOM05D007274 ORTHO05D009194 1.5e-22 109.0 62 83.9
COL.COLO4_19207 Corchorus olitorius HOM05D007274 ORTHO05D009194 1.9e-22 108.6 68 75.0
FAN21G0952 Fragaria x ananassa HOM05D007274 ORTHO05D009194 2.5e-22 108.2 62 83.9
Sed0003405 Sechium edule HOM05D007274 ORTHO05D009194 2.5e-22 108.2 62 82.3
FAN16G2799 Fragaria x ananassa HOM05D007274 ORTHO05D009194 3.3e-22 107.8 62 82.3
RcHm_v2.0_Chr5g0056551 Rosa chinensis HOM05D007274 ORTHO05D009194 3.3e-22 107.8 62 83.9
AT5G22875 Arabidopsis thaliana HOM05D007274 ORTHO05D009194 4.3e-22 107.5 62 82.3
FvH4_3g30550 Fragaria vesca HOM05D007274 ORTHO05D009194 5.6e-22 107.1 62 82.3
FAN11G1565 Fragaria x ananassa HOM05D007274 ORTHO05D009194 5.6e-22 107.1 62 82.3
AL6G34010 Arabidopsis lyrata HOM05D007274 ORTHO05D009194 7.3e-22 106.7 62 82.3
Carub.0006s2065 Capsella rubella HOM05D007274 ORTHO05D009194 9.6e-22 106.3 62 82.3
Potri.004G217300 Populus trichocarpa HOM05D007274 ORTHO05D009194 9.6e-22 106.3 69 75.4
A10p18160 Brassica napus HOM05D007274 ORTHO05D009194 1.2e-21 105.9 62 82.3
BraA10t43891Z Brassica rapa HOM05D007274 ORTHO05D009194 1.2e-21 105.9 62 82.3
THA.LOC109116051 Tarenaya hassleriana HOM05D007274 ORTHO05D009194 1.2e-21 105.9 62 82.3
Cfa010139 Carpinus fangiana HOM05D007274 ORTHO05D009194 1.6e-21 105.5 62 79.0
Thecc.09G297800 Theobroma cacao HOM05D007274 ORTHO05D009194 1.6e-21 105.5 62 79.0
Sabra04G0148000 Salix brachista HOM05D007274 ORTHO05D009194 2.1e-21 105.1 69 73.9
QL01p014890 Quercus lobata HOM05D007274 ORTHO05D009194 3.6e-21 104.4 62 79.0
Haze_23527 Corylus avellana HOM05D007274 ORTHO05D009194 1.4e-20 102.4 62 75.8
Ah.01g004810 Amaranthus hybridus HOM05D007274 ORTHO05D009194 3.1e-20 101.3 64 79.7
ECA248G0925 Erigeron canadensis HOM05D007274 ORTHO05D009194 3.1e-20 101.3 70 71.4
ATR0043G009 Amborella trichopoda HOM05D007274 ORTHO05D009194 4.0e-20 100.9 69 66.7
C02p11370 Brassica napus HOM05D007274 ORTHO05D009194 5.2e-20 100.5 64 78.1
Ciclev10029644m.g Citrus clementina HOM05D007274 ORTHO05D009194 5.2e-20 100.5 63 79.4
Lsat_1_v5_gn_1_64881 Lactuca sativa HOM05D007274 ORTHO05D009194 5.2e-20 100.5 71 71.8
PGR102G1958 Punica granatum HOM05D007274 ORTHO05D009194 5.2e-20 100.5 63 76.2
CSS0018211 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 8.9e-20 99.8 69 73.9
Manes.04G012400 Manihot esculenta HOM05D007274 ORTHO05D009194 8.9e-20 99.8 63 79.4
HPP92_002407 Vanilla planifolia HOM05D007274 ORTHO05D009194 1.2e-19 99.4 69 69.6
BNapus_Darmor_BZH_scaffold_38p00270 Brassica napus HOM05D007274 ORTHO05D009194 1.5e-19 99.0 64 76.6
Migut.D02299 Erythranthe guttata HOM05D007274 ORTHO05D009194 1.5e-19 99.0 64 75.0
Gohir.D09G062900 Gossypium hirsutum HOM05D007274 ORTHO05D009194 1.5e-19 99.0 62 77.4
Gorai.006G077700 Gossypium raimondii HOM05D007274 ORTHO05D009194 1.5e-19 99.0 62 77.4
Hund00829 Selenicereus undatus HOM05D007274 ORTHO05D009194 1.5e-19 99.0 64 78.1
Aqoxy1G01060 Aquilegia oxysepala HOM05D007274 ORTHO05D009194 2.0e-19 98.6 69 71.0
Duzib150G1296 Durio zibethinus HOM05D007274 ORTHO05D009194 2.0e-19 98.6 62 77.4
Duzib150G1526 Durio zibethinus HOM05D007274 ORTHO05D009194 2.0e-19 98.6 62 77.4
SalBow6G3121 Salvia bowleyana HOM05D007274 ORTHO05D009194 2.0e-19 98.6 64 76.6
AUR62024013 Chenopodium quinoa HOM05D007274 ORTHO05D009194 2.6e-19 98.2 64 76.6
AUR62041328 Chenopodium quinoa HOM05D007274 ORTHO05D009194 2.6e-19 98.2 64 76.6
HanXRQChr11g0346021 Helianthus annuus HOM05D007274 ORTHO05D009194 2.6e-19 98.2 70 68.6
Actinidia07190 Actinidia chinensis HOM05D007274 ORTHO05D009194 3.4e-19 97.8 71 69.0
EL10Ac9g21016 Beta vulgaris HOM05D007274 ORTHO05D009194 3.4e-19 97.8 70 71.4
BraA02t05697Z Brassica rapa HOM05D007274 ORTHO05D009194 4.4e-19 97.4 64 76.6
Gohir.A09G064000 Gossypium hirsutum HOM05D007274 ORTHO05D009194 4.4e-19 97.4 62 75.8
Nitab4.5_0009628g0020 Nicotiana tabacum HOM05D007274 ORTHO05D009194 4.4e-19 97.4 65 75.4
CSS0039770 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 5.8e-19 97.1 71 70.4
Cc01_g10210 Coffea canephora HOM05D007274 ORTHO05D009194 5.8e-19 97.1 71 69.0
Peaxi162Scf00983g00003 Petunia axillaris HOM05D007274 ORTHO05D009194 5.8e-19 97.1 65 73.8
Sc06g0006140 Simmondsia chinensis HOM05D007274 ORTHO05D009194 7.6e-19 96.7 64 75.0
Nitab4.5_0000173g0170 Nicotiana tabacum HOM05D007274 ORTHO05D009194 9.9e-19 96.3 65 73.8
Oeu007727.1 Olea europaea HOM05D007274 ORTHO05D009194 9.9e-19 96.3 64 75.0
Rhsim13G0101500 Rhododendron simsii HOM05D007274 ORTHO05D009194 9.9e-19 96.3 65 73.8
vmacro03251 Vaccinium macrocarpon HOM05D007274 ORTHO05D009194 9.9e-19 96.3 65 75.4
unitig_899.g15364 Utricularia gibba HOM05D000376 ORTHO05D000237 1.3e-18 95.9 64 71.9
Os04g0165500 Oryza sativa ssp. japonica HOM05D007274 ORTHO05D009194 1.7e-18 95.5 63 69.8
Rhsim13G0101200 Rhododendron simsii HOM05D007274 ORTHO05D009194 1.7e-18 95.5 65 73.8
SGA_v2.0_scaffold277G46704 Striga asiatica HOM05D007274 ORTHO05D009194 1.7e-18 95.5 64 70.3
Atru.chr3.3502 Acer truncatum HOM05D007274 ORTHO05D009194 2.9e-18 94.7 56 83.9
DCAR_022681 Daucus carota HOM05D007274 ORTHO05D009194 4.9e-18 94.0 64 71.9
MBI04_g08417_MAGBIO Magnolia biondii HOM05D007274 ORTHO05D009194 4.9e-18 94.0 69 65.2
Solyc11g066450.2 Solanum lycopersicum HOM05D007274 ORTHO05D009194 6.4e-18 93.6 65 70.8
Sopen11g026200 Solanum pennellii HOM05D007274 ORTHO05D009194 6.4e-18 93.6 65 70.8
PGSC0003DMG401000458 Solanum tuberosum HOM05D007274 ORTHO05D009194 6.4e-18 93.6 65 70.8
Nn2g13873 Nelumbo nucifera HOM05D007274 ORTHO05D009194 8.4e-18 93.2 63 73.0
CSS0045495 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 1.1e-17 92.8 71 66.2
Haze_23532 Corylus avellana HOM05D007274 ORTHO05D009194 1.1e-17 92.8 62 67.7
CDE04G2982 Ceratophyllum demersum HOM05D007274 ORTHO05D009194 1.4e-17 92.4 70 61.4
CSS0014818 Camellia sinensis var. sinensis HOM05D007274 ORTHO05D009194 2.4e-17 91.7 65 70.8
PSO384G1249 Papaver somniferum HOM05D007274 ORTHO05D009194 2.4e-17 91.7 66 66.7
CAN.G546.54 Capsicum annuum HOM05D007274 ORTHO05D009194 4.2e-17 90.9 65 70.8
Haze_08394 Corylus avellana HOM05D007274 ORTHO05D009194 2.7e-16 88.2 74 59.5
Nn5g27554 Nelumbo nucifera HOM05D007274 ORTHO05D009194 4.6e-16 87.4 62 71.0
SEGI_23633 Sequoiadendron giganteum HOM05D007274 ORTHO05D009194 4.6e-16 87.4 64 67.2
GSVIVG01031456001 Vitis vinifera HOM05D007274 ORTHO05D009194 1.3e-15 85.9 69 58.0
MD11G1149300 Malus domestica HOM05D007274 ORTHO05D009194 6.6e-15 83.6 50 82.0
Mapoly0009s0144 Marchantia polymorpha HOM05D007274 ORTHO05D009194 2.8e-13 78.2 59 57.6
Pp3c6_6370 Physcomitrium patens HOM05D007274 ORTHO05D009194 4.8e-13 77.4 64 60.9
Lsat_1_v5_gn_1_64921 Lactuca sativa HOM05D007274 ORTHO05D009194 4.9e-10 67.4 63 60.3
TAR369G0919 Trochodendron aralioides HOM05D007274 ORTHO05D009194 1.9e-09 65.5 37 78.4
SHI06197 Sapria himalayana HOM05D005377 ORTHO05D003034 4.2e-09 64.3 65 53.8


User provided reference genes

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