Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G068600 Phaseolus vulgaris HOM05D001033 ORTHO05D004888 1.3e-37 159.1 71 100.0
VMungo0498G0002 Vigna mungo HOM05D001033 ORTHO05D004888 8.3e-21 103.2 86 59.3
Phvul.011G056548 Phaseolus vulgaris HOM05D001033 ORTHO05D004888 7.0e-20 100.1 86 58.1
AL2G20710 Arabidopsis lyrata HOM05D001033 ORTHO05D004888 6.0e-19 97.1 73 58.9
ATR0303G003 Amborella trichopoda HOM05D001033 ORTHO05D004888 1.3e-18 95.9 86 52.3
SalBow1G1376 Salvia bowleyana HOM05D001033 ORTHO05D004888 2.3e-18 95.1 86 51.2
Migut.D01427 Erythranthe guttata HOM05D001033 ORTHO05D004888 3.0e-18 94.7 86 51.2
Lj2C1237T30 Lonicera japonica HOM05D001033 ORTHO05D004888 3.0e-18 94.7 86 51.2
Lj2C1239T58 Lonicera japonica HOM05D001033 ORTHO05D004888 3.0e-18 94.7 86 51.2
Lj2C1239T8 Lonicera japonica HOM05D001033 ORTHO05D004888 3.0e-18 94.7 86 51.2
unitig_91.g26504 Utricularia gibba HOM05D001033 ORTHO05D004888 3.0e-18 94.7 86 51.2
Medtr4g035040 Medicago truncatula HOM05D001033 ORTHO05D004888 3.9e-18 94.4 86 51.2
Medtr7g021800 Medicago truncatula HOM05D001033 ORTHO05D004888 3.9e-18 94.4 86 51.2
Gohir.D07G155032 Gossypium hirsutum HOM05D001033 ORTHO05D004888 5.1e-18 94.0 86 51.2
DCAR_032487 Daucus carota HOM05D001033 ORTHO05D004888 8.6e-18 93.2 86 51.2
Hma1.2p1_2223F.1_g317410 Hydrangea macrophylla HOM05D001033 ORTHO05D004888 8.6e-18 93.2 86 50.0
Nn021s41548 Nelumbo nucifera HOM05D001033 ORTHO05D004888 1.1e-17 92.8 86 50.0
ATCG00420 Arabidopsis thaliana HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
A06p23250 Brassica napus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
BNapus_Darmor_BZH_scaffold_253p00160 Brassica napus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
BNapus_Darmor_BZH_scaffold_287p00080 Brassica napus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
C02p43470 Brassica napus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
C09p40480 Brassica napus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
BolSC45t60947H Brassica oleracea HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
BolSC46t60994H Brassica oleracea HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
BolSC46t61041H Brassica oleracea HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
BolSC47t61103H Brassica oleracea HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
BraSC25t45841Z Brassica rapa HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
BraSC25t45874Z Brassica rapa HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
BraSC58t46413Z Brassica rapa HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
BraSC58t46484Z Brassica rapa HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
Duzib192G0593 Durio zibethinus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
Gohir.1Z049399 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
Gohir.A09G102100 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
Gohir.D03G073392 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
HanXRQChr00c0345g0573891 Helianthus annuus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
HanXRQChr00c0702g0576871 Helianthus annuus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
HanXRQChr02g0041501 Helianthus annuus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
HanXRQChr02g0044951 Helianthus annuus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
HanXRQChr07g0201011 Helianthus annuus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
HanXRQChr08g0210301 Helianthus annuus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
HanXRQChr10g0283491 Helianthus annuus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
HanXRQChr10g0285321 Helianthus annuus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
HanXRQChr10g0289211 Helianthus annuus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
HanXRQChr10g0303781 Helianthus annuus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
HanXRQChr11g0326761 Helianthus annuus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
HanXRQCPg0579971 Helianthus annuus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 86 50.0
LjContig00318g0025596 Lotus japonicus HOM05D001033 ORTHO05D004888 1.9e-17 92.0 82 56.1
CAN.G219.25 Capsicum annuum HOM05D001033 ORTHO05D004888 2.5e-17 91.7 82 52.4
COL.COLO4_03102 Corchorus olitorius HOM05D001033 ORTHO05D004888 2.5e-17 91.7 86 50.0
Peaxi162Scf00334g00124 Petunia axillaris HOM05D001033 ORTHO05D004888 2.5e-17 91.7 82 52.4
RcHm_v2.0_CPg0502181 Rosa chinensis HOM05D001033 ORTHO05D004888 2.5e-17 91.7 86 51.2
HanXRQChr15g0480701 Helianthus annuus HOM05D001033 ORTHO05D004888 3.3e-17 91.3 86 50.0
BolSC45t60865H Brassica oleracea HOM05D001033 ORTHO05D004888 4.3e-17 90.9 86 50.0
Sed0011576 Sechium edule HOM05D001033 ORTHO05D004888 4.3e-17 90.9 86 50.0
Sed0015951 Sechium edule HOM05D000680 ORTHO05D000738 4.3e-17 90.9 86 50.0
Sed0016230 Sechium edule HOM05D001033 ORTHO05D004888 4.3e-17 90.9 86 50.0
Gohir.A09G102850 Gossypium hirsutum HOM05D001033 ORTHO05D004888 5.6e-17 90.5 86 48.8
PSO548G0080 Papaver somniferum HOM05D001033 ORTHO05D004888 5.6e-17 90.5 86 50.0
Potri.013G163200 Populus trichocarpa HOM05D001033 ORTHO05D004888 5.6e-17 90.5 82 52.4
QL93p0270_0002 Quercus lobata HOM05D001033 ORTHO05D004888 7.3e-17 90.1 85 50.6
PGR111G0105 Punica granatum HOM05D001033 ORTHO05D004888 9.5e-17 89.7 86 48.8
TWI36G0295 Tripterygium wilfordii HOM05D001033 ORTHO05D004888 9.5e-17 89.7 86 51.2
Ah.10g027550 Amaranthus hybridus HOM05D001033 ORTHO05D004888 1.2e-16 89.4 86 48.8
BolSC29t60582H Brassica oleracea HOM05D001033 ORTHO05D004888 1.2e-16 89.4 86 48.8
Lsat_1_v5_gn_3_99221 Lactuca sativa HOM05D001033 ORTHO05D004888 1.2e-16 89.4 86 48.8
Lsat_1_v5_gn_3_99300 Lactuca sativa HOM05D001033 ORTHO05D004888 1.2e-16 89.4 86 48.8
Lsat_1_v5_gn_4_40440 Lactuca sativa HOM05D001033 ORTHO05D004888 1.2e-16 89.4 86 48.8
Lalb_Chr07g0192231 Lupinus albus HOM05D001033 ORTHO05D004888 1.2e-16 89.4 82 52.4
Lalb_Chr07g0192281 Lupinus albus HOM05D001033 ORTHO05D004888 1.2e-16 89.4 82 52.4
Medtr0002s0630 Medicago truncatula HOM05D001033 ORTHO05D004888 1.2e-16 89.4 86 48.8
Solyc00g500061.1 Solanum lycopersicum HOM05D001033 ORTHO05D004888 1.2e-16 89.4 82 51.2
Solyc00g500142.1 Solanum lycopersicum HOM05D001033 ORTHO05D004888 1.2e-16 89.4 86 48.8
C02p28640 Brassica napus HOM05D001033 ORTHO05D004888 1.6e-16 89.0 86 48.8
BolC2t08910H Brassica oleracea HOM05D001033 ORTHO05D004888 1.6e-16 89.0 86 48.8
AL2G21460 Arabidopsis lyrata HOM05D001033 ORTHO05D004888 2.1e-16 88.6 86 47.7
Lalb_Chr20g0115661 Lupinus albus HOM05D001033 ORTHO05D004888 2.8e-16 88.2 82 51.2
Lj4g0025955 Lotus japonicus HOM05D001033 ORTHO05D004888 3.6e-16 87.8 82 56.1
EL10As12g24022 Beta vulgaris HOM05D001033 ORTHO05D004888 4.7e-16 87.4 82 51.2
EL10As1g23049 Beta vulgaris HOM05D001033 ORTHO05D004888 4.7e-16 87.4 82 51.2
CAN.G170.11 Capsicum annuum HOM05D001033 ORTHO05D004888 4.7e-16 87.4 82 50.0
Eucgr.A02747 Eucalyptus grandis HOM05D001033 ORTHO05D004888 4.7e-16 87.4 85 47.1
PSO302G0237 Papaver somniferum HOM05D001033 ORTHO05D004888 6.2e-16 87.0 86 48.8
Gohir.D07G099350 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.8e-15 85.5 86 46.5
CARHR282040 Cardamine hirsuta HOM05D001033 ORTHO05D004888 4.0e-15 84.3 81 48.1
CAN.G1183.6 Capsicum annuum HOM05D001033 ORTHO05D004888 6.8e-15 83.6 86 48.8
Gohir.D01G102242 Gossypium hirsutum HOM05D001033 ORTHO05D004888 1.5e-14 82.4 66 56.1
SEGI_35798 Sequoiadendron giganteum HOM05D001033 ORTHO05D004888 1.5e-14 82.4 86 48.8
Thhalv10010993m.g Eutrema salsugineum HOM05D001033 ORTHO05D004888 3.4e-14 81.3 68 54.4
CAN.G91.9 Capsicum annuum HOM05D001033 ORTHO05D004888 2.2e-13 78.6 82 48.8
Nitab4.5_0005412g0030 Nicotiana tabacum HOM05D001033 ORTHO05D004888 8.3e-13 76.6 82 46.3
Gorai.005G187900 Gossypium raimondii HOM05D001033 ORTHO05D004888 1.1e-12 76.3 86 43.0
Sc19g0006000 Simmondsia chinensis HOM05D001033 ORTHO05D004888 1.1e-12 76.3 80 47.5
Gorai.001G107100 Gossypium raimondii HOM05D001033 ORTHO05D004888 7.1e-12 73.6 71 49.3
Sed0007524 Sechium edule HOM05D000680 ORTHO05D000738 2.1e-11 72.0 72 47.2
CSS0012650 Camellia sinensis var. sinensis HOM05D001033 ORTHO05D004888 1.7e-10 68.9 86 43.0
Nn071s42392 Nelumbo nucifera HOM05D001033 ORTHO05D004888 3.0e-10 68.2 64 48.4
Ah.09g227310 Amaranthus hybridus HOM05D001033 ORTHO05D004888 8.6e-10 66.6 69 44.9
Sed0001763 Sechium edule HOM05D001033 ORTHO05D004888 8.6e-10 66.6 69 44.9
BraA06t25427Z Brassica rapa HOM05D001033 ORTHO05D004888 1.1e-09 66.2 74 43.2
C09p29570 Brassica napus HOM05D001033 ORTHO05D004888 1.2e-08 62.8 35 71.4
SGA_v2.0_scaffold781G53594 Striga asiatica HOM05D001033 ORTHO05D004888 2.1e-08 62.0 35 71.4
Gorai.001G177200 Gossypium raimondii HOM05D001033 ORTHO05D004888 2.8e-08 61.6 69 43.5
FAN19G1182 Fragaria x ananassa HOM05D001033 ORTHO05D004888 3.6e-08 61.2 35 71.4
EL10As15g24143 Beta vulgaris HOM05D001033 ORTHO05D004888 4.7e-08 60.8 85 40.0
SMO086G0027 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 6.2e-08 60.5 79 40.5
SMO086G0049 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 6.2e-08 60.5 79 40.5
SMO233G0001 Selaginella moellendorffii HOM05D001033 ORTHO05D004888 6.2e-08 60.5 79 40.5
Lalb_Chr03g0030861 Lupinus albus HOM05D001033 ORTHO05D004888 4.0e-07 57.8 35 65.7


User provided reference genes

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