Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G066500 Phaseolus vulgaris HOM05D005597 ORTHO05D007304 0.0e+00 1135.9 566 100.0
VMungo1080G1355 Vigna mungo HOM05D005597 ORTHO05D007304 0.0e+00 1081.2 566 94.7
Glyma.12G229300 Glycine max HOM05D005597 ORTHO05D007304 3.7e-297 1024.2 566 90.5
Glyma.13G270500 Glycine max HOM05D005597 ORTHO05D007304 3.7e-297 1024.2 566 90.1
Lj3g0024865 Lotus japonicus HOM05D005597 ORTHO05D007304 8.0e-284 979.9 566 85.0
arahy.Tifrunner.gnm1.ann1.06PSEJ Arachis hypogaea HOM05D005597 ORTHO05D007304 7.0e-280 966.8 561 84.5
arahy.Tifrunner.gnm1.ann1.Z1JPC4 Arachis hypogaea HOM05D005597 ORTHO05D007304 3.5e-279 964.5 561 84.3
Lalb_Chr01g0006811 Lupinus albus HOM05D005597 ORTHO05D007304 3.0e-278 961.4 560 84.1
Ca_03990_v3 Cicer arietinum L. HOM05D005597 ORTHO05D007304 1.1e-277 959.5 561 83.8
TPR.G19385 Trifolium pratense HOM05D005597 ORTHO05D007304 8.3e-273 943.3 574 81.2
Medtr2g076680 Medicago truncatula HOM05D005597 ORTHO05D007304 2.4e-272 941.8 560 82.5
Thecc.07G110000 Theobroma cacao HOM05D005597 ORTHO05D007304 6.2e-268 927.2 574 78.2
Manes.03G102000 Manihot esculenta HOM05D005597 ORTHO05D007304 5.2e-267 924.1 568 78.9
TWI38G1600 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 3.4e-266 921.4 560 79.3
TWI39G1070 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 4.4e-266 921.0 569 79.1
Gorai.013G173400 Gossypium raimondii HOM05D005597 ORTHO05D007304 1.7e-265 919.1 573 78.0
QL08p026520 Quercus lobata HOM05D005597 ORTHO05D007304 2.9e-265 918.3 575 78.1
Gohir.A13G149000 Gossypium hirsutum HOM05D005597 ORTHO05D007304 3.7e-265 917.9 573 77.8
Duzib213G0141 Durio zibethinus HOM05D005597 ORTHO05D007304 1.9e-264 915.6 580 76.7
Atru.chr2.2174 Acer truncatum HOM05D005597 ORTHO05D007304 3.2e-264 914.8 572 77.6
CSS0014594 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 9.2e-264 913.3 569 78.6
Potri.011G110800 Populus trichocarpa HOM05D005597 ORTHO05D007304 9.2e-264 913.3 572 77.3
CiPaw.11G160900 Carya illinoinensis HOM05D005597 ORTHO05D007304 2.7e-263 911.8 569 77.7
COL.COLO4_17568 Corchorus olitorius HOM05D005597 ORTHO05D007304 1.0e-262 909.8 603 75.3
FAN11G3052 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.0e-262 909.8 569 78.4
Actinidia12571 Actinidia chinensis HOM05D005597 ORTHO05D007304 2.3e-262 908.7 568 78.2
FvH4_3g18450 Fragaria vesca HOM05D005597 ORTHO05D007304 2.3e-262 908.7 569 78.4
CsaV3_4G033140 Cucumis sativus L. HOM05D005597 ORTHO05D007304 3.9e-262 907.9 571 77.1
FAN21G1763 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.1e-261 906.4 569 78.4
ClCG11G017480 Citrullus lanatus HOM05D005597 ORTHO05D007304 2.5e-261 905.2 571 77.8
RcHm_v2.0_Chr5g0031201 Rosa chinensis HOM05D005597 ORTHO05D007304 7.3e-261 903.7 543 80.3
Cfa019573 Carpinus fangiana HOM05D005597 ORTHO05D007304 6.2e-260 900.6 572 77.6
Duzib187G0678 Durio zibethinus HOM05D005597 ORTHO05D007304 8.1e-260 900.2 579 76.3
Rhsim06G0207300 Rhododendron simsii HOM05D005597 ORTHO05D007304 1.4e-259 899.4 569 77.5
TAR624G0947 Trochodendron aralioides HOM05D005597 ORTHO05D007304 3.1e-259 898.3 567 77.1
Dinv14987 Davidia involucrata HOM05D005597 ORTHO05D007304 5.2e-259 897.5 572 76.7
Prupe.4G166500 Prunus persica HOM05D005597 ORTHO05D007304 1.2e-258 896.3 570 78.6
PGR083G2138 Punica granatum HOM05D005597 ORTHO05D007304 1.3e-257 892.9 565 76.3
MD03G1241900 Malus domestica HOM05D005597 ORTHO05D007304 2.2e-257 892.1 573 77.3
FAN16G1691 Fragaria x ananassa HOM05D005597 ORTHO05D007304 3.8e-257 891.3 577 76.4
Hma1.2p1_1016F.1_g248150 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 8.4e-257 890.2 562 76.9
MD11G1261800 Malus domestica HOM05D005597 ORTHO05D007304 1.4e-256 889.4 544 80.0
Aqoxy1G02067 Aquilegia oxysepala HOM05D005597 ORTHO05D007304 2.4e-256 888.6 566 75.3
Lj8A149T49 Lonicera japonica HOM05D005597 ORTHO05D007304 3.2e-256 888.3 572 76.4
TAR626G0744 Trochodendron aralioides HOM05D005597 ORTHO05D007304 4.2e-256 887.9 566 75.8
Nn1g09131 Nelumbo nucifera HOM05D005597 ORTHO05D007304 1.0e-254 883.2 567 76.5
SGA_v2.0_scaffold47G17797 Striga asiatica HOM05D005597 ORTHO05D007304 3.9e-254 881.3 569 75.2
CAN.G162.8 Capsicum annuum HOM05D005597 ORTHO05D007304 1.9e-253 879.0 563 74.2
Eucgr.F01228 Eucalyptus grandis HOM05D005597 ORTHO05D007304 2.5e-253 878.6 574 75.6
Sed0009860 Sechium edule HOM05D005597 ORTHO05D007304 2.5e-253 878.6 533 79.4
THA.LOC104812323 Tarenaya hassleriana HOM05D005597 ORTHO05D007304 1.3e-252 876.3 570 74.9
MSTRG.12867 Avicennia marina HOM05D005597 ORTHO05D007304 2.1e-252 875.5 564 73.9
Sabra11G0098300 Salix brachista HOM05D005597 ORTHO05D007304 1.1e-251 873.2 623 70.9
Migut.H01992 Erythranthe guttata HOM05D005597 ORTHO05D007304 6.9e-251 870.5 561 74.7
BcaB02g06666 Brassica carinata HOM05D005597 ORTHO05D007304 2.9e-249 865.1 569 72.9
Ciclev10019496m.g Citrus clementina HOM05D005597 ORTHO05D007304 2.9e-249 865.1 572 74.3
BolC5t30227H Brassica oleracea HOM05D005597 ORTHO05D007304 3.8e-249 864.8 568 72.2
PSO675G3712 Papaver somniferum HOM05D005597 ORTHO05D007304 4.9e-249 864.4 569 74.3
Carub.0001s1664 Capsella rubella HOM05D005597 ORTHO05D007304 6.4e-249 864.0 570 73.3
PSO500G0209 Papaver somniferum HOM05D005597 ORTHO05D007304 1.4e-248 862.8 569 74.2
A06p12800 Brassica napus HOM05D005597 ORTHO05D007304 1.9e-248 862.4 568 72.5
MBI07_g03181_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D007304 3.2e-248 861.7 561 74.9
BraA06t24441Z Brassica rapa HOM05D005597 ORTHO05D007304 7.1e-248 860.5 568 72.4
PGSC0003DMG400012388 Solanum tuberosum HOM05D005597 ORTHO05D007304 7.1e-248 860.5 566 73.9
Sp1g15040 Schrenkiella parvula HOM05D005597 ORTHO05D007304 1.2e-247 859.8 568 73.1
C05p15120 Brassica napus HOM05D005597 ORTHO05D007304 2.1e-247 859.0 568 72.4
GSVIVG01014208001 Vitis vinifera HOM05D005597 ORTHO05D007304 2.7e-247 858.6 511 79.8
AT1G16900 Arabidopsis thaliana HOM05D005597 ORTHO05D007304 3.5e-247 858.2 569 72.6
BcaC05g25546 Brassica carinata HOM05D005597 ORTHO05D007304 3.5e-247 858.2 563 72.3
AL1G29070 Arabidopsis lyrata HOM05D005597 ORTHO05D007304 7.9e-247 857.1 569 73.1
A08p31230 Brassica napus HOM05D005597 ORTHO05D007304 7.9e-247 857.1 568 72.5
BraA08t35046Z Brassica rapa HOM05D005597 ORTHO05D007304 7.9e-247 857.1 568 72.5
Solyc07g062540.3 Solanum lycopersicum HOM05D005597 ORTHO05D007304 7.9e-247 857.1 566 73.5
CARHR017370 Cardamine hirsuta HOM05D005597 ORTHO05D007304 2.3e-246 855.5 565 73.3
C08p17610 Brassica napus HOM05D005597 ORTHO05D007304 6.6e-246 854.0 565 72.4
Sopen07g030770 Solanum pennellii HOM05D005597 ORTHO05D007304 6.6e-246 854.0 566 73.3
BcaC07g38821 Brassica carinata HOM05D005597 ORTHO05D007304 8.7e-246 853.6 566 72.3
CDE02G4663 Ceratophyllum demersum HOM05D005597 ORTHO05D007304 8.7e-246 853.6 567 73.9
BcaB03g13027 Brassica carinata HOM05D005597 ORTHO05D007304 5.6e-245 850.9 543 74.6
BolC8t49386H Brassica oleracea HOM05D005597 ORTHO05D007304 5.6e-245 850.9 550 73.3
Thhalv10007218m.g Eutrema salsugineum HOM05D005597 ORTHO05D007304 1.6e-244 849.4 569 71.7
FAN25G0069 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.1e-243 846.7 575 73.7
AUR62043187 Chenopodium quinoa HOM05D005597 ORTHO05D007304 2.6e-242 842.0 568 72.9
Hund10564 Selenicereus undatus HOM05D005597 ORTHO05D007304 3.4e-242 841.6 554 74.4
Cc05_g11200 Coffea canephora HOM05D005597 ORTHO05D007304 2.4e-240 835.5 511 77.1
ECA240G4584 Erigeron canadensis HOM05D000832 ORTHO05D000982 2.4e-240 835.5 572 72.2
CANSAT35G0471 Cannabis sativa HOM05D005597 ORTHO05D007304 9.3e-240 833.6 534 77.3
vmacro11932 Vaccinium macrocarpon HOM05D005597 ORTHO05D007304 3.5e-239 831.6 594 67.8
HanXRQChr14g0442721 Helianthus annuus HOM05D005597 ORTHO05D007304 3.0e-238 828.6 572 71.3
CSS0003229 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 1.6e-236 822.8 563 72.6
Lsat_1_v5_gn_9_100260 Lactuca sativa HOM05D005597 ORTHO05D007304 1.2e-234 816.6 573 69.8
ATR0602G238 Amborella trichopoda HOM05D005597 ORTHO05D007304 5.8e-234 814.3 568 70.6
EL10Ac4g08334 Beta vulgaris HOM05D005597 ORTHO05D007304 1.7e-233 812.8 583 68.8
unitig_749.g13539 Utricularia gibba HOM05D005597 ORTHO05D007304 2.3e-230 802.4 565 68.1
Aa31LG7G1320 Aethionema arabicum HOM05D005597 ORTHO05D007304 1.8e-227 792.7 553 70.9
Zm00001eb120330 Zea mays HOM05D005597 ORTHO05D007304 4.1e-227 791.6 568 68.5
Haze_09335 Corylus avellana HOM05D005597 ORTHO05D007304 2.6e-226 788.9 478 80.1
Os01g0209000 Oryza sativa ssp. japonica HOM05D005597 ORTHO05D007304 1.7e-225 786.2 531 70.6
SalBow7G0883 Salvia bowleyana HOM05D005597 ORTHO05D007304 1.1e-219 766.9 498 74.5
HPP92_004052 Vanilla planifolia HOM05D005597 ORTHO05D007304 5.7e-213 744.6 617 61.1
Duzib213G0888 Durio zibethinus HOM05D005597 ORTHO05D007304 3.4e-210 735.3 447 79.4
AUR62019570 Chenopodium quinoa HOM05D005597 ORTHO05D007304 3.7e-204 715.3 565 65.0
MELO3C025637.2 Cucumis melo HOM05D005597 ORTHO05D007304 1.1e-197 693.7 433 76.9
Gohir.D13G153500 Gossypium hirsutum HOM05D005597 ORTHO05D007304 4.1e-195 685.3 407 80.3
Psat5g238320 Pisum sativum HOM05D005597 ORTHO05D007304 1.2e-194 683.7 420 82.4
Peaxi162Scf00069g02235 Petunia axillaris HOM05D005597 ORTHO05D007304 1.0e-193 680.6 434 74.4
DCAR_013152 Daucus carota HOM05D005597 ORTHO05D007304 3.0e-190 669.1 439 74.5
Hma1.2p1_1016F.1_g248140 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 1.6e-186 656.8 421 77.7
Mapoly0059s0091 Marchantia polymorpha HOM05D005597 ORTHO05D007304 1.4e-179 633.6 547 57.4
Sc03g0010510 Simmondsia chinensis HOM05D005597 ORTHO05D007304 1.9e-176 623.2 425 71.1
Ah.06g185290 Amaranthus hybridus HOM05D005597 ORTHO05D007304 3.3e-160 569.3 429 66.4
Pp3c6_16240 Physcomitrium patens HOM05D005597 ORTHO05D007304 3.9e-153 545.8 578 50.3
SMO143G0166 Selaginella moellendorffii HOM05D005597 ORTHO05D007304 2.8e-151 539.7 553 52.1
Dinv18359 Davidia involucrata HOM05D005597 ORTHO05D007304 6.8e-150 535.0 373 74.0
AagrBONN_evm.TU.Sc2ySwM_228.833 Anthoceros agrestis HOM05D005597 ORTHO05D007304 5.1e-145 518.8 574 48.6
CBR_g38668 Chara braunii HOM05D005597 ORTHO05D007304 1.3e-121 441.0 585 41.4
SHI21382 Sapria himalayana HOM05D005597 ORTHO05D007304 2.5e-120 436.8 381 60.4
Cpa.g.sc97.103 Carica papaya HOM05D005597 ORTHO05D007304 7.7e-93 345.5 213 80.3
Nitab4.5_0001145g0050 Nicotiana tabacum HOM05D005597 ORTHO05D007304 3.3e-88 330.1 276 65.2
Oeu059263.1 Olea europaea HOM05D005597 ORTHO05D007304 3.3e-88 330.1 384 50.0
SHI21385 Sapria himalayana HOM05D000105 ORTHO05D000023 4.1e-86 323.2 220 68.2
Nitab4.5_0000246g0240 Nicotiana tabacum HOM05D005597 ORTHO05D007304 5.5e-83 312.8 583 38.3
SEGI_23731 Sequoiadendron giganteum HOM05D005597 ORTHO05D007304 3.3e-80 303.5 223 62.8
MCO07G083 Micromonas commoda HOM05D005597 ORTHO05D007304 2.4e-70 270.8 600 33.7
PRCOL_00005636 Prasinoderma coloniale HOM05D005597 ORTHO05D007304 1.6e-66 258.1 573 32.8
Cfa025275 Carpinus fangiana HOM05D005597 ORTHO05D028637 8.6e-60 235.7 504 34.3
Gohir.A07G160600 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.6e-53 214.9 148 71.6
Gohir.A04G098250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 4.6e-53 213.4 151 69.5
Gohir.A03G066250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 8.0e-50 202.6 139 71.2
Actinidia09803 Actinidia chinensis HOM05D005597 ORTHO05D007304 2.6e-48 197.6 126 74.6
Atru.chr2.2170 Acer truncatum HOM05D005597 ORTHO05D007304 1.1e-43 182.2 95 82.1
COL.COLO4_17572 Corchorus olitorius HOM05D005597 ORTHO05D007304 4.0e-41 173.7 106 78.3
Lsat_1_v5_gn_9_21740 Lactuca sativa HOM05D005597 ORTHO05D007174 3.4e-40 170.6 199 55.8
Actinidia24363 Actinidia chinensis HOM05D005597 ORTHO05D007304 4.2e-22 110.5 89 68.5
Nn1g04407 Nelumbo nucifera HOM05D005597 ORTHO05D007304 1.3e-18 99.0 71 63.4
MBI01_g45400_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 2.9e-15 87.8 50 74.0
MBI01_g45631_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 4.9e-15 87.0 60 61.7
Potri.001G392050 Populus trichocarpa HOM05D005597 ORTHO05D007304 2.1e-13 81.6 76 53.9
Lsat_1_v5_gn_3_114580 Lactuca sativa HOM05D002100 ORTHO05D002310 1.9e-11 75.1 59 69.5
MELO3C005285.2 Cucumis melo HOM05D005919 ORTHO05D007176 9.0e-09 66.2 402 23.6
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 2.6e-08 64.7 358 24.0
CsaV3_1G028860 Cucumis sativus L. HOM05D005919 ORTHO05D007176 1.7e-07 62.0 359 24.5
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 1.4e-06 58.9 378 24.1
PGR042G2595 Punica granatum HOM05D005919 ORTHO05D007176 3.2e-06 57.8 434 23.7
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 4.2e-06 57.4 377 22.8
Zm00001eb229730 Zea mays HOM05D005919 ORTHO05D007176 7.1e-06 56.6 461 24.1
ClCG09G013740 Citrullus lanatus HOM05D005919 ORTHO05D007176 9.3e-06 56.2 318 24.2


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