Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G064600 Phaseolus vulgaris HOM05D007153 ORTHO05D008769 4.3e-153 544.7 283 100.0
Phvul.005G064500 Phaseolus vulgaris HOM05D007153 ORTHO05D008769 8.7e-146 520.4 283 95.4
VMungo1080G0806 Vigna mungo HOM05D007153 ORTHO05D008769 6.9e-127 457.6 283 83.7
Glyma.15G242900 Glycine max HOM05D007153 ORTHO05D008769 3.3e-121 438.7 283 81.6
Glyma.13G262500 Glycine max HOM05D007153 ORTHO05D008769 4.7e-115 418.3 283 78.8
TPR.G6902 Trifolium pratense HOM05D007153 ORTHO05D008769 1.6e-94 350.1 288 68.8
Lalb_Chr01g0016241 Lupinus albus HOM05D007153 ORTHO05D008769 3.8e-93 345.5 290 65.9
Lj3g0020060 Lotus japonicus HOM05D007153 ORTHO05D008769 9.5e-92 340.9 297 66.0
arahy.Tifrunner.gnm1.ann1.57A972 Arachis hypogaea HOM05D007153 ORTHO05D008769 1.4e-90 337.0 256 70.3
arahy.Tifrunner.gnm1.ann1.C8MR0W Arachis hypogaea HOM05D007153 ORTHO05D008769 9.8e-89 330.9 288 64.9
Medtr2g072510 Medicago truncatula HOM05D007153 ORTHO05D008769 2.2e-88 329.7 289 64.7
Ca_03417_v3 Cicer arietinum L. HOM05D007153 ORTHO05D008769 8.6e-85 317.8 211 76.8
Ca_29738_v3 Cicer arietinum L. HOM05D007153 ORTHO05D008769 8.6e-85 317.8 211 76.8
Psat1g008400 Pisum sativum HOM05D007153 ORTHO05D008769 2.5e-84 316.2 211 76.8
Haze_08464 Corylus avellana HOM05D007153 ORTHO05D008769 3.5e-78 295.8 290 57.6
CiPaw.11G154200 Carya illinoinensis HOM05D007153 ORTHO05D008769 2.5e-76 289.7 292 57.9
FAN25G3240 Fragaria x ananassa HOM05D007153 ORTHO05D008769 4.3e-76 288.9 249 62.7
QL08p027831 Quercus lobata HOM05D007153 ORTHO05D008769 7.3e-76 288.1 263 59.7
MD03G1252100 Malus domestica HOM05D007153 ORTHO05D008769 9.5e-76 287.7 240 61.7
Prupe.4G153500 Prunus persica HOM05D007153 ORTHO05D008769 9.5e-76 287.7 225 64.9
Cfa019490 Carpinus fangiana HOM05D007153 ORTHO05D008769 1.6e-75 287.0 290 57.2
FvH4_3g17350 Fragaria vesca HOM05D007153 ORTHO05D008769 2.8e-75 286.2 249 62.2
RcHm_v2.0_Chr5g0028871 Rosa chinensis HOM05D007153 ORTHO05D008769 6.2e-75 285.0 234 64.1
GSVIVG01014069001 Vitis vinifera HOM05D007153 ORTHO05D008769 2.0e-73 280.0 287 55.1
Sabra11G0083600 Salix brachista HOM05D007153 ORTHO05D008769 6.4e-72 275.0 279 54.5
CsaV3_4G032710 Cucumis sativus L. HOM05D007153 ORTHO05D008769 1.1e-71 274.2 279 55.9
Sed0027291 Sechium edule HOM05D007153 ORTHO05D008769 1.4e-71 273.9 288 54.5
MELO3C016680.2 Cucumis melo HOM05D007153 ORTHO05D008769 3.2e-71 272.7 285 54.7
AUR62039568 Chenopodium quinoa HOM05D007153 ORTHO05D008769 5.4e-71 271.9 279 53.4
ClCG11G017050 Citrullus lanatus HOM05D007153 ORTHO05D008769 1.2e-70 270.8 281 54.4
COL.COLO4_17448 Corchorus olitorius HOM05D007153 ORTHO05D008769 1.6e-70 270.4 251 57.8
Atru.chr2.1920 Acer truncatum HOM05D007153 ORTHO05D008769 2.1e-70 270.0 209 65.6
CANSAT56G2533 Cannabis sativa HOM05D007153 ORTHO05D008769 2.1e-70 270.0 264 54.9
Thecc.07G140300 Theobroma cacao HOM05D007153 ORTHO05D008769 2.7e-70 269.6 270 55.9
Eucgr.F01378 Eucalyptus grandis HOM05D007153 ORTHO05D008769 3.5e-70 269.2 287 55.4
Nn3g20646 Nelumbo nucifera HOM05D007153 ORTHO05D008769 3.5e-70 269.2 246 59.8
vmacro11989 Vaccinium macrocarpon HOM05D007153 ORTHO05D008769 4.6e-70 268.9 207 64.7
CSS0012595 Camellia sinensis var. sinensis HOM05D007153 ORTHO05D008769 7.8e-70 268.1 207 65.7
MBI07_g07830_MAGBIO Magnolia biondii HOM05D007153 ORTHO05D008769 1.0e-69 267.7 283 53.0
Potri.011G101800 Populus trichocarpa HOM05D007153 ORTHO05D008769 1.3e-69 267.3 262 56.5
Ah.06g187590 Amaranthus hybridus HOM05D007153 ORTHO05D008769 1.7e-69 266.9 283 53.0
Dinv26693 Davidia involucrata HOM05D007153 ORTHO05D008769 1.7e-69 266.9 246 58.9
Rhsim06G0187600 Rhododendron simsii HOM05D007153 ORTHO05D008769 1.7e-69 266.9 207 65.2
TWI38G0031 Tripterygium wilfordii HOM05D007153 ORTHO05D008769 1.7e-69 266.9 261 56.3
Ciclev10021578m.g Citrus clementina HOM05D007153 ORTHO05D008769 6.6e-69 265.0 279 54.1
MD11G1273600 Malus domestica HOM05D007153 ORTHO05D008769 2.5e-68 263.1 205 64.4
Hund10387 Selenicereus undatus HOM05D007153 ORTHO05D008769 2.5e-68 263.1 241 55.6
Atru.chr2.1917 Acer truncatum HOM05D007153 ORTHO05D008769 3.3e-68 262.7 209 64.1
Duzib213G0031 Durio zibethinus HOM05D007153 ORTHO05D008769 7.3e-68 261.5 283 53.7
PGR083G2631 Punica granatum HOM05D007153 ORTHO05D008769 2.1e-67 260.0 215 61.4
Sc03g0010790 Simmondsia chinensis HOM05D007153 ORTHO05D008769 2.1e-67 260.0 273 51.6
Lsat_1_v5_gn_7_100481 Lactuca sativa HOM05D007153 ORTHO05D008769 2.8e-67 259.6 222 57.7
AUR62019681 Chenopodium quinoa HOM05D007153 ORTHO05D008769 6.2e-67 258.5 208 61.1
Gohir.D13G155400 Gossypium hirsutum HOM05D007153 ORTHO05D008769 8.1e-67 258.1 250 56.0
Gorai.013G176000 Gossypium raimondii HOM05D007153 ORTHO05D008769 1.8e-66 256.9 250 56.0
Migut.H02033 Erythranthe guttata HOM05D007153 ORTHO05D008769 2.3e-66 256.5 243 55.6
ECA236G0620 Erigeron canadensis HOM05D007153 ORTHO05D008769 6.8e-66 255.0 215 57.7
Solyc07g062030.3 Solanum lycopersicum HOM05D007153 ORTHO05D008769 2.0e-65 253.4 283 50.2
Sopen07g030290 Solanum pennellii HOM05D007153 ORTHO05D008769 2.0e-65 253.4 235 55.3
Cc05_g10530 Coffea canephora HOM05D007153 ORTHO05D008769 2.6e-65 253.1 243 56.0
HanXRQChr15g0495311 Helianthus annuus HOM05D007153 ORTHO05D008769 3.4e-65 252.7 222 56.3
Lj1A822T45 Lonicera japonica HOM05D007153 ORTHO05D008769 3.4e-65 252.7 282 50.0
Peaxi162Scf00111g01220 Petunia axillaris HOM05D007153 ORTHO05D008769 3.4e-65 252.7 250 53.6
PGSC0003DMG400007056 Solanum tuberosum HOM05D007153 ORTHO05D008769 3.4e-65 252.7 283 50.2
PSO063G3995 Papaver somniferum HOM05D007153 ORTHO05D008769 9.9e-65 251.1 260 53.5
Aqoxy1G01815 Aquilegia oxysepala HOM05D007153 ORTHO05D008769 1.3e-64 250.8 293 48.1
BcaC08g43538 Brassica carinata HOM05D007153 ORTHO05D008769 1.7e-64 250.4 216 59.3
C06p09270 Brassica napus HOM05D007153 ORTHO05D008769 1.7e-64 250.4 220 58.2
BolC6t36005H Brassica oleracea HOM05D007153 ORTHO05D008769 1.7e-64 250.4 216 59.3
PSO832G0017 Papaver somniferum HOM05D007153 ORTHO05D008769 1.7e-64 250.4 283 51.2
BraA06t23324Z Brassica rapa HOM05D007153 ORTHO05D008769 2.2e-64 250.0 216 59.7
MSTRG.14258 Avicennia marina HOM05D007153 ORTHO05D008769 2.9e-64 249.6 287 51.6
THA.LOC104810421 Tarenaya hassleriana HOM05D007153 ORTHO05D008769 4.9e-64 248.8 246 53.7
A06p00970 Brassica napus HOM05D007153 ORTHO05D008769 1.1e-63 247.7 216 59.3
Sp1g40050 Schrenkiella parvula HOM05D007153 ORTHO05D008769 1.1e-63 247.7 246 54.5
Thhalv10011696m.g Eutrema salsugineum HOM05D007153 ORTHO05D008769 1.4e-63 247.3 250 52.8
Nitab4.5_0003618g0090 Nicotiana tabacum HOM05D007153 ORTHO05D008769 1.4e-63 247.3 226 57.1
BcaB07g33323 Brassica carinata HOM05D007153 ORTHO05D008769 2.4e-63 246.5 226 56.2
CAN.G375.63 Capsicum annuum HOM05D007153 ORTHO05D008769 3.2e-63 246.1 283 49.8
Carub.0001s4270 Capsella rubella HOM05D007153 ORTHO05D008769 1.6e-62 243.8 290 47.9
AL1G62070 Arabidopsis lyrata HOM05D007153 ORTHO05D008769 2.1e-62 243.4 218 56.4
Aa31LG10G1690 Aethionema arabicum HOM05D007153 ORTHO05D008769 3.5e-62 242.7 211 58.3
CARHR043760 Cardamine hirsuta HOM05D007153 ORTHO05D008769 4.6e-62 242.3 218 56.0
AT1G53520 Arabidopsis thaliana HOM05D007153 ORTHO05D008769 3.0e-61 239.6 218 56.0
DCAR_017582 Daucus carota HOM05D007153 ORTHO05D008769 1.1e-60 237.7 209 60.3
Hma1.2p1_0713F.1_g207790 Hydrangea macrophylla HOM05D007153 ORTHO05D008769 1.5e-60 237.3 207 56.0
SGA_v2.0_scaffold130G34251 Striga asiatica HOM05D007153 ORTHO05D008769 7.6e-57 224.9 209 54.1
unitig_747.g21594 Utricularia gibba HOM05D007153 ORTHO05D008769 1.1e-55 221.1 241 52.3
Potri.001G380700 Populus trichocarpa HOM05D007153 ORTHO05D008769 4.6e-54 215.7 191 57.1
Manes.15G100200 Manihot esculenta HOM05D007153 ORTHO05D008769 5.6e-52 208.8 233 51.1
CDE04G0295 Ceratophyllum demersum HOM05D007153 ORTHO05D008769 6.2e-51 205.3 185 54.6
EL10Ac4g08449 Beta vulgaris HOM05D007153 ORTHO05D008769 1.4e-47 194.1 163 58.3
Nitab4.5_0001140g0070 Nicotiana tabacum HOM05D007153 ORTHO05D008769 4.6e-46 189.1 226 47.3
Cpa.g.sc77.72 Carica papaya HOM05D007153 ORTHO05D008769 5.3e-42 175.6 146 63.0
FAN11G0553 Fragaria x ananassa HOM05D007153 ORTHO05D008769 2.0e-41 173.7 121 73.6
FAN16G1619 Fragaria x ananassa HOM05D007153 ORTHO05D008769 2.0e-41 173.7 121 73.6
Cc00_g00040 Coffea canephora HOM05D007153 ORTHO05D008769 1.3e-40 171.0 205 47.8
Mapoly0077s0003 Marchantia polymorpha HOM05D007153 ORTHO05D008769 4.2e-39 166.0 203 45.3
Pp3c10_20100 Physcomitrium patens HOM05D007153 ORTHO05D008769 6.0e-38 162.2 205 43.9
Mapoly0044s0117 Marchantia polymorpha HOM05D007153 ORTHO05D008769 3.3e-36 156.4 232 40.1
Os02g0320300 Oryza sativa ssp. japonica HOM05D007153 ORTHO05D008769 1.3e-35 154.5 278 37.4
Zm00001eb238460 Zea mays HOM05D007153 ORTHO05D008769 5.3e-34 149.1 204 41.2
AagrBONN_evm.TU.Sc2ySwM_228.3568 Anthoceros agrestis HOM05D007153 ORTHO05D008769 2.5e-23 113.6 162 35.2
SMO147G0119 Selaginella moellendorffii HOM05D007153 ORTHO05D008769 2.0e-17 94.0 121 42.1
Sabra11G0085100 Salix brachista HOM05D007153 ORTHO05D008769 5.0e-16 89.4 102 53.9
MCO15G144 Micromonas commoda HOM05D007153 ORTHO05D008769 2.5e-15 87.0 236 28.8
Pp3c26_4040 Physcomitrium patens HOM05D006808 ORTHO05D008610 7.2e-15 85.5 189 29.6
Pp3c4_25770 Physcomitrium patens HOM05D006808 ORTHO05D008610 6.1e-14 82.4 189 28.0
AagrBONN_evm.TU.Sc2ySwM_369.397 Anthoceros agrestis HOM05D006808 ORTHO05D008769 7.4e-12 75.5 203 28.6
Atru.chr12.582 Acer truncatum HOM05D003362 ORTHO05D003783 3.7e-11 73.2 202 27.7
TWI38G1411 Tripterygium wilfordii HOM05D003362 ORTHO05D003783 3.7e-11 73.2 193 27.5
MCO16G251 Micromonas commoda HOM05D007153 ORTHO05D008769 4.8e-11 72.8 205 30.2
CANSAT21G2171 Cannabis sativa HOM05D003362 ORTHO05D003783 1.1e-10 71.6 193 28.5
Lalb_Chr06g0164121 Lupinus albus HOM05D003362 ORTHO05D003783 1.2e-09 68.2 231 25.5
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 2.6e-09 67.0 188 26.1
Cre12.g517100 Chlamydomonas reinhardtii HOM05D007153 ORTHO05D008769 3.4e-09 66.6 184 27.2
AagrBONN_evm.TU.Sc2ySwM_117.3318 Anthoceros agrestis HOM05D006808 ORTHO05D008610 4.5e-09 66.2 196 26.0
Mapoly0175s0004 Marchantia polymorpha HOM05D006808 ORTHO05D008610 5.9e-09 65.9 189 24.9
Sp2g30475 Schrenkiella parvula HOM05D003362 ORTHO05D003783 7.7e-09 65.5 196 26.5
AagrBONN_evm.TU.Sc2ySwM_117.3242 Anthoceros agrestis HOM05D006808 ORTHO05D008610 1.7e-08 64.3 207 25.1
Lj1g0023491 Lotus japonicus HOM05D006808 ORTHO05D008610 1.7e-08 64.3 185 25.4
CARHR165140 Cardamine hirsuta HOM05D003362 ORTHO05D003783 2.2e-08 63.9 196 26.0
ECA234G4199 Erigeron canadensis HOM05D002027 ORTHO05D007928 2.2e-08 63.9 213 24.9
Gorai.010G092800 Gossypium raimondii HOM05D002027 ORTHO05D007928 2.9e-08 63.5 214 25.2
Medtr3g093980 Medicago truncatula HOM05D006808 ORTHO05D008610 5.0e-08 62.8 187 25.1
Glyma.10G292200 Glycine max HOM05D003362 ORTHO05D003783 6.5e-08 62.4 223 24.7
SEGI_22659 Sequoiadendron giganteum HOM05D003362 ORTHO05D003783 6.5e-08 62.4 209 23.9
AagrBONN_evm.TU.Sc2ySwM_344.5062 Anthoceros agrestis HOM05D006808 ORTHO05D008610 8.5e-08 62.0 191 25.1
Glyma.20G241600 Glycine max HOM05D003362 ORTHO05D003783 8.5e-08 62.0 223 24.7
Ca_29954_v3 Cicer arietinum L. HOM05D006808 ORTHO05D008610 1.1e-07 61.6 185 25.9
Aa31LG10G10040 Aethionema arabicum HOM05D003362 ORTHO05D003783 1.4e-07 61.2 206 25.2
AagrBONN_evm.TU.Sc2ySwM_228.5586 Anthoceros agrestis HOM05D006808 ORTHO05D008610 1.4e-07 61.2 189 23.8
arahy.Tifrunner.gnm1.ann1.SNS0I7 Arachis hypogaea HOM05D006808 ORTHO05D008610 1.4e-07 61.2 187 24.6
TPR.G16134 Trifolium pratense HOM05D006808 ORTHO05D008610 1.4e-07 61.2 188 25.0
MD01G1118100 Malus domestica HOM05D003362 ORTHO05D003783 1.9e-07 60.8 191 28.3
arahy.Tifrunner.gnm1.ann1.WYW97W Arachis hypogaea HOM05D006808 ORTHO05D008610 2.5e-07 60.5 187 24.6
FvH4_2g30870 Fragaria vesca HOM05D002027 ORTHO05D007928 3.2e-07 60.1 190 24.2
Medtr1g115840 Medicago truncatula HOM05D003362 ORTHO05D003783 5.5e-07 59.3 203 24.6
Sabra11G0084000 Salix brachista HOM05D000002 ORTHO05D001134 7.2e-07 58.9 51 56.9
SEGI_28474 Sequoiadendron giganteum HOM05D002027 ORTHO05D004229 7.2e-07 58.9 240 22.9
ATR0751G184 Amborella trichopoda HOM05D002027 ORTHO05D004229 1.6e-06 57.8 208 26.9
ClCG07G005100 Citrullus lanatus HOM05D006808 ORTHO05D008610 2.1e-06 57.4 191 24.6
FAN20G1907 Fragaria x ananassa HOM05D000120 ORTHO05D000068 2.1e-06 57.4 188 25.0
Psat6g237920 Pisum sativum HOM05D003362 ORTHO05D003783 2.7e-06 57.0 203 22.7
Phvul.003G216600 Phaseolus vulgaris HOM05D003362 ORTHO05D003783 3.6e-06 56.6 193 25.4
Glyma.04G222400 Glycine max HOM05D006808 ORTHO05D008610 7.9e-06 55.5 187 25.1


User provided reference genes

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