Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G064300 Phaseolus vulgaris HOM05D013451 ORTHO05D009679 7.2e-89 330.5 160 100.0
Phvul.007G147700 Phaseolus vulgaris HOM05D013451 ORTHO05D009679 5.1e-18 95.1 106 51.9
Phvul.005G097700 Phaseolus vulgaris HOM05D013451 ORTHO05D009679 7.4e-17 91.3 62 66.1
Glyma.20G112000 Glycine max HOM05D013451 ORTHO05D009679 2.1e-16 89.7 145 36.6
TPR.G31011 Trifolium pratense HOM05D000017 ORTHO05D000013 2.0e-14 83.2 167 33.5
Phvul.008G091900 Phaseolus vulgaris HOM05D013451 ORTHO05D009679 5.8e-14 81.6 141 38.3
Ca_22902_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 1.1e-12 77.4 169 32.5
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 6.1e-11 71.6 167 31.1
Ca_12624_v3 Cicer arietinum L. HOM05D010632 ORTHO05D007253 1.0e-10 70.9 167 29.9
Ca_06856_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 1.8e-10 70.1 168 31.5
QL08p013497 Quercus lobata HOM05D000017 ORTHO05D007253 1.8e-10 70.1 162 29.0
QL08p005699 Quercus lobata HOM05D000017 ORTHO05D007253 2.3e-10 69.7 162 29.0
QL08p006036 Quercus lobata HOM05D000017 ORTHO05D007253 2.3e-10 69.7 162 29.0
TPR.G14615 Trifolium pratense HOM05D013451 ORTHO05D009679 2.3e-10 69.7 158 28.5
TPR.G11122 Trifolium pratense HOM05D000017 ORTHO05D000013 3.9e-10 68.9 162 29.6
TPR.G26350 Trifolium pratense HOM05D000017 ORTHO05D000013 3.9e-10 68.9 163 30.7
Ca_14871_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 8.7e-10 67.8 154 33.8
Lj6g0025034 Lotus japonicus HOM05D000017 ORTHO05D000013 4.3e-09 65.5 162 27.2
Lj6g0013797 Lotus japonicus HOM05D000017 ORTHO05D000013 2.8e-08 62.8 162 27.2
Phvul.005G052300 Phaseolus vulgaris HOM05D013451 ORTHO05D009679 6.3e-08 61.6 53 49.1
VMungo0464G1406 Vigna mungo HOM05D013451 ORTHO05D009679 6.3e-08 61.6 69 46.4
Medtr8g464080 Medicago truncatula HOM05D023704 ORTHO05D020438 3.1e-07 59.3 159 27.0
TPR.G18584 Trifolium pratense HOM05D000017 ORTHO05D007253 3.1e-07 59.3 156 28.2
CSS0007859 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.1e-07 58.9 162 26.5
EL10Ac6g14585 Beta vulgaris HOM05D000017 ORTHO05D007253 5.3e-07 58.5 164 28.0
arahy.Tifrunner.gnm1.ann1.31P59F Arachis hypogaea HOM05D000017 ORTHO05D000013 6.9e-07 58.2 154 27.9
TPR.G35471 Trifolium pratense HOM05D000017 ORTHO05D009679 9.0e-07 57.8 159 25.8
CSS0006340 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.2e-06 57.4 162 25.9
CSS0015352 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.0e-06 56.6 163 27.6
CSS0001578 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-06 56.2 163 27.6
CSS0007981 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-06 56.2 163 27.6
CSS0014296 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-06 56.2 163 27.6
CSS0017905 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.6e-06 56.2 163 27.6
CSS0026252 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.6e-06 56.2 163 27.6
CSS0042409 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 2.6e-06 56.2 163 27.6
CSS0008184 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 3.4e-06 55.8 163 27.6
CSS0025680 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.9e-06 55.1 163 27.0
TPR.G40010 Trifolium pratense HOM05D013451 ORTHO05D009679 5.9e-06 55.1 64 37.5


User provided reference genes

Program Settings