Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G063000 Phaseolus vulgaris HOM05D005989 ORTHO05D000022 5.4e-127 457.6 221 100.0
RcHm_v2.0_Chr3g0465511 Rosa chinensis HOM05D000155 ORTHO05D000022 1.6e-14 84.0 170 34.1
RcHm_v2.0_Chr7g0185631 Rosa chinensis HOM05D000155 ORTHO05D000022 2.1e-14 83.6 172 34.3
RcHm_v2.0_Chr2g0160431 Rosa chinensis HOM05D000003 ORTHO05D000004 2.8e-14 83.2 172 34.3
RcHm_v2.0_Chr3g0453641 Rosa chinensis HOM05D000003 ORTHO05D000004 2.8e-14 83.2 172 34.3
RcHm_v2.0_Chr2g0133661 Rosa chinensis HOM05D000155 ORTHO05D000022 2.6e-12 76.6 140 34.3
MD07G1021300 Malus domestica HOM05D000155 ORTHO05D000022 1.7e-11 73.9 135 36.3
MD02G1050700 Malus domestica HOM05D000155 ORTHO05D000022 2.2e-11 73.6 135 37.0
MD13G1019000 Malus domestica HOM05D000155 ORTHO05D000022 3.2e-10 69.7 128 36.7
RcHm_v2.0_Chr2g0140031 Rosa chinensis HOM05D000003 ORTHO05D000004 3.2e-10 69.7 165 30.3
RcHm_v2.0_Chr4g0393351 Rosa chinensis HOM05D000155 ORTHO05D000022 3.2e-10 69.7 130 33.8
RcHm_v2.0_Chr6g0259301 Rosa chinensis HOM05D000155 ORTHO05D000022 4.1e-10 69.3 165 30.3
Atru.chr5.427 Acer truncatum HOM05D000155 ORTHO05D000022 1.2e-09 67.8 131 32.8
RcHm_v2.0_Chr3g0472791 Rosa chinensis HOM05D000155 ORTHO05D000022 1.6e-09 67.4 138 33.3
RcHm_v2.0_Chr4g0417481 Rosa chinensis HOM05D005989 ORTHO05D000022 2.7e-09 66.6 114 31.6
FvH4_6g51131 Fragaria vesca HOM05D000155 ORTHO05D000022 3.5e-09 66.2 141 33.3
Psat2g155160 Pisum sativum HOM05D005989 ORTHO05D000022 6.0e-09 65.5 170 33.5
RcHm_v2.0_Chr3g0462451 Rosa chinensis HOM05D005989 ORTHO05D000022 6.0e-09 65.5 170 31.8
RcHm_v2.0_Chr6g0263381 Rosa chinensis HOM05D000155 ORTHO05D000022 5.1e-08 62.4 135 31.1
RcHm_v2.0_Chr2g0167951 Rosa chinensis HOM05D005989 ORTHO05D000022 1.1e-07 61.2 135 33.3
Atru.chr2.2552 Acer truncatum HOM05D005989 ORTHO05D000022 2.5e-07 60.1 158 29.1
Lalb_Chr21g0306271 Lupinus albus HOM05D005989 ORTHO05D000022 1.2e-06 57.8 166 28.9
RcHm_v2.0_Chr1g0316991 Rosa chinensis HOM05D005989 ORTHO05D000022 2.1e-06 57.0 150 27.3
RcHm_v2.0_Chr4g0409421 Rosa chinensis HOM05D005989 ORTHO05D000022 2.8e-06 56.6 150 30.7
FvH4_7g14701 Fragaria vesca HOM05D000021 ORTHO05D000010 6.2e-06 55.5 139 31.7
TPR.G13740 Trifolium pratense HOM05D005989 ORTHO05D000022 6.2e-06 55.5 109 31.2


User provided reference genes

Program Settings