Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G062000 Phaseolus vulgaris HOM05D007681 ORTHO05D009734 1.2e-36 156.0 78 100.0
Phvul.003G022100 Phaseolus vulgaris HOM05D007681 ORTHO05D009734 3.0e-32 141.4 78 88.5
Glyma.07G166400 Glycine max HOM05D007681 ORTHO05D009734 1.5e-23 112.5 78 66.7
Lj2g0022739 Lotus japonicus HOM05D007681 ORTHO05D009734 1.2e-20 102.8 78 59.0
Lj5g0022624 Lotus japonicus HOM05D007681 ORTHO05D009734 1.2e-20 102.8 78 59.0
Psat6g044480 Pisum sativum HOM05D007681 ORTHO05D009734 2.0e-20 102.1 79 60.8
Lalb_Chr10g0095991 Lupinus albus HOM05D007681 ORTHO05D009734 1.7e-19 99.0 78 59.0
TPR.G36897 Trifolium pratense HOM05D007681 ORTHO05D009734 1.7e-19 99.0 78 62.8
Ca_12590_v3 Cicer arietinum L. HOM05D007681 ORTHO05D009734 3.8e-19 97.8 80 58.8
Medtr1g031740 Medicago truncatula HOM05D007681 ORTHO05D009734 3.8e-19 97.8 79 60.8
arahy.Tifrunner.gnm1.ann1.2VU2GF Arachis hypogaea HOM05D007681 ORTHO05D009734 1.2e-17 92.8 78 59.0
arahy.Tifrunner.gnm1.ann1.W0FD01 Arachis hypogaea HOM05D007681 ORTHO05D009734 1.6e-17 92.4 77 58.4
Cfa014982 Carpinus fangiana HOM05D007681 ORTHO05D009734 6.8e-16 87.0 77 53.2
Ciclev10016943m.g Citrus clementina HOM05D007681 ORTHO05D009734 5.7e-15 84.0 73 53.4
Manes.15G131200 Manihot esculenta HOM05D007681 ORTHO05D009734 3.7e-14 81.3 72 52.8
Atru.chr11.647 Acer truncatum HOM05D007681 ORTHO05D009734 6.3e-14 80.5 68 52.9
Actinidia36647 Actinidia chinensis HOM05D007681 ORTHO05D009734 1.1e-13 79.7 68 52.9
Gohir.1Z015700 Gossypium hirsutum HOM05D007681 ORTHO05D009734 1.4e-13 79.3 72 51.4
Gohir.A01G150154 Gossypium hirsutum HOM05D007681 ORTHO05D009734 1.4e-13 79.3 72 51.4
Gorai.002G176600 Gossypium raimondii HOM05D007681 ORTHO05D009734 1.4e-13 79.3 72 51.4
Thecc.02G287600 Theobroma cacao HOM05D007681 ORTHO05D009734 1.8e-13 79.0 72 50.0
Carub.0005s0053 Capsella rubella HOM05D007681 ORTHO05D009734 2.4e-13 78.6 77 53.2
Cpa.g.sc2.238 Carica papaya HOM05D007681 ORTHO05D009734 2.4e-13 78.6 72 50.0
TWI77G0184 Tripterygium wilfordii HOM05D007681 ORTHO05D009734 2.4e-13 78.6 68 52.9
AT2G01590 Arabidopsis thaliana HOM05D007681 ORTHO05D009734 7.0e-13 77.0 77 51.9
CiPaw.06G048600 Carya illinoinensis HOM05D007681 ORTHO05D009734 7.0e-13 77.0 77 48.1
Dinv28046 Davidia involucrata HOM05D007681 ORTHO05D009734 9.2e-13 76.6 68 52.9
Sed0010427 Sechium edule HOM05D007681 ORTHO05D009734 9.2e-13 76.6 78 48.7
C02p49750 Brassica napus HOM05D007681 ORTHO05D009734 1.2e-12 76.3 77 51.9
Gohir.D01G143200 Gossypium hirsutum HOM05D007681 ORTHO05D009734 1.2e-12 76.3 72 50.0
BcaB07g30389 Brassica carinata HOM05D007681 ORTHO05D009734 1.6e-12 75.9 77 50.6
BcaC03g17055 Brassica carinata HOM05D007681 ORTHO05D009734 2.0e-12 75.5 77 50.6
Hma1.2p1_0330F.1_g127440 Hydrangea macrophylla HOM05D007681 ORTHO05D009734 2.0e-12 75.5 68 51.5
Sabra10G0080500 Salix brachista HOM05D007681 ORTHO05D009734 2.0e-12 75.5 68 54.4
Sp2g13030 Schrenkiella parvula HOM05D007681 ORTHO05D009734 2.0e-12 75.5 77 51.9
A02p32170 Brassica napus HOM05D007681 ORTHO05D009734 2.7e-12 75.1 77 51.9
BraA02t08231Z Brassica rapa HOM05D007681 ORTHO05D009734 2.7e-12 75.1 77 51.9
CARHR144140 Cardamine hirsuta HOM05D007681 ORTHO05D009734 2.7e-12 75.1 77 50.6
BolC2t11054H Brassica oleracea HOM05D007681 ORTHO05D009734 3.5e-12 74.7 77 50.6
Peaxi162Scf00376g00013 Petunia axillaris HOM05D007681 ORTHO05D009734 3.5e-12 74.7 68 51.5
Aa31LG2G8310 Aethionema arabicum HOM05D007681 ORTHO05D009734 4.6e-12 74.3 77 51.9
Potri.010G110100 Populus trichocarpa HOM05D007681 ORTHO05D009734 4.6e-12 74.3 68 51.5
ClCG07G005970 Citrullus lanatus HOM05D007681 ORTHO05D009734 5.9e-12 73.9 68 52.9
Eucgr.B02939 Eucalyptus grandis HOM05D007681 ORTHO05D009734 5.9e-12 73.9 70 44.3
Thhalv10005039m.g Eutrema salsugineum HOM05D007681 ORTHO05D009734 5.9e-12 73.9 77 50.6
AL5G10680 Arabidopsis lyrata HOM05D007681 ORTHO05D009734 7.8e-12 73.6 77 51.9
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 7.8e-12 73.6 78 46.2
CsaV3_5G014700 Cucumis sativus L. HOM05D007681 ORTHO05D009734 7.8e-12 73.6 68 52.9
Lsat_1_v5_gn_8_44280 Lactuca sativa HOM05D007681 ORTHO05D009734 7.8e-12 73.6 68 51.5
PSO017G3157 Papaver somniferum HOM05D007681 ORTHO05D009734 7.8e-12 73.6 68 48.5
PSO478G3571 Papaver somniferum HOM05D007681 ORTHO05D009734 7.8e-12 73.6 68 48.5
Nitab4.5_0001343g0010 Nicotiana tabacum HOM05D007681 ORTHO05D009734 1.3e-11 72.8 68 48.5
Oeu063591.1 Olea europaea HOM05D007681 ORTHO05D009734 2.3e-11 72.0 66 48.5
Nitab4.5_0012949g0010 Nicotiana tabacum HOM05D007681 ORTHO05D009734 2.9e-11 71.6 68 48.5
Nn3g18293 Nelumbo nucifera HOM05D007681 ORTHO05D009734 5.0e-11 70.9 73 50.7
TAR629G0584 Trochodendron aralioides HOM05D007681 ORTHO05D009734 8.6e-11 70.1 68 48.5
ECA233G2077 Erigeron canadensis HOM05D007681 ORTHO05D009734 1.5e-10 69.3 68 47.1
PGR102G0336 Punica granatum HOM05D007681 ORTHO05D009734 1.5e-10 69.3 68 48.5
Rhsim09G0093700 Rhododendron simsii HOM05D007681 ORTHO05D009734 1.9e-10 68.9 77 42.9
AUR62026755 Chenopodium quinoa HOM05D007681 ORTHO05D009734 2.5e-10 68.6 68 47.1
Nitab4.5_0000018g0170 Nicotiana tabacum HOM05D007681 ORTHO05D009734 2.5e-10 68.6 69 47.8
HanXRQChr12g0363581 Helianthus annuus HOM05D007681 ORTHO05D009734 5.6e-10 67.4 70 51.4
AUR62013520 Chenopodium quinoa HOM05D007681 ORTHO05D009734 1.2e-09 66.2 68 45.6
Lj6A742G71 Lonicera japonica HOM05D007681 ORTHO05D009734 2.1e-09 65.5 68 45.6
Ah.01g006360 Amaranthus hybridus HOM05D007681 ORTHO05D009734 4.7e-09 64.3 68 42.6
Aqoxy3G00048 Aquilegia oxysepala HOM05D007681 ORTHO05D009734 4.7e-09 64.3 68 45.6
EL10Ac1g01492 Beta vulgaris HOM05D007681 ORTHO05D009734 4.7e-09 64.3 67 41.8
PGSC0003DMG400015899 Solanum tuberosum HOM05D007681 ORTHO05D009734 6.2e-09 63.9 68 48.5
Migut.L00587 Erythranthe guttata HOM05D007681 ORTHO05D009734 1.0e-08 63.2 68 44.1
Solyc05g026570.3 Solanum lycopersicum HOM05D007681 ORTHO05D009734 1.0e-08 63.2 68 47.1
Sopen05g023100 Solanum pennellii HOM05D007681 ORTHO05D009734 1.0e-08 63.2 68 47.1
MSTRG.7616 Avicennia marina HOM05D007681 ORTHO05D009734 1.4e-08 62.8 66 42.4
unitig_26.g8951 Utricularia gibba HOM05D007681 ORTHO05D009734 4.0e-08 61.2 69 43.5
Prupe.1G330200 Prunus persica HOM05D007681 ORTHO05D009734 5.2e-08 60.8 68 47.1
MD13G1021700 Malus domestica HOM05D007681 ORTHO05D009734 1.2e-07 59.7 78 43.6
CANSAT01G2988 Cannabis sativa HOM05D007681 ORTHO05D009734 2.0e-07 58.9 78 42.3
RcHm_v2.0_Chr4g0443571 Rosa chinensis HOM05D007681 ORTHO05D009734 3.4e-07 58.2 77 42.9
MBI16_g06252_MAGBIO Magnolia biondii HOM05D007681 ORTHO05D009734 5.8e-07 57.4 78 38.5
FvH4_4g34062 Fragaria vesca HOM05D007681 ORTHO05D009734 1.3e-06 56.2 77 41.6
FAN17G1502 Fragaria x ananassa HOM05D007681 ORTHO05D009734 1.3e-06 56.2 77 41.6
Phvul.004G068500 Phaseolus vulgaris HOM05D007681 ORTHO05D009734 3.7e-06 54.7 36 75.0


User provided reference genes

Program Settings