Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G061600 Phaseolus vulgaris HOM05D012055 ORTHO05D014183 5.2e-84 314.3 155 100.0
VMungo1080G1331 Vigna mungo HOM05D012055 ORTHO05D014183 8.6e-55 217.2 156 73.7
Glyma.13G260000 Glycine max HOM05D012055 ORTHO05D014183 5.6e-54 214.5 169 74.0
Glyma.15G248000 Glycine max HOM05D012055 ORTHO05D014183 2.1e-53 212.6 171 74.3
Lj3g0014819 Lotus japonicus HOM05D012055 ORTHO05D014183 1.6e-32 143.3 160 55.6
Psat0s1353g0040 Pisum sativum HOM05D012055 ORTHO05D014183 1.1e-25 120.6 161 49.1
Psat1g009360 Pisum sativum HOM05D012055 ORTHO05D014183 5.5e-25 118.2 162 50.0
Medtr2g071760 Medicago truncatula HOM05D012055 ORTHO05D014183 4.6e-24 115.2 159 47.2
Medtr2g071750 Medicago truncatula HOM05D012055 ORTHO05D014183 3.3e-22 109.0 159 45.9
Ca_03397_v3 Cicer arietinum L. HOM05D012055 ORTHO05D014183 4.3e-22 108.6 160 44.4
Medtr2g071790 Medicago truncatula HOM05D012055 ORTHO05D014183 4.3e-22 108.6 159 44.7
TPR.G26651 Trifolium pratense HOM05D012055 ORTHO05D014183 1.3e-21 107.1 160 45.6
Medtr2g071740 Medicago truncatula HOM05D012055 ORTHO05D014183 8.2e-21 104.4 159 46.5
Lalb_Chr25g0285461 Lupinus albus HOM05D012055 ORTHO05D014183 9.0e-20 100.9 154 42.9
TPR.G26637 Trifolium pratense HOM05D012055 ORTHO05D014183 1.2e-19 100.5 160 43.1
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 2.2e-13 79.7 138 39.1
Sabra16G0249900 Salix brachista HOM05D008142 ORTHO05D009674 4.1e-12 75.5 168 36.9
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 6.9e-12 74.7 163 33.1
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 2.0e-11 73.2 140 37.1
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 2.2e-10 69.7 155 34.2
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 5.0e-10 68.6 172 30.8
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 1.1e-09 67.4 153 32.7
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.1e-09 67.4 153 32.7
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 1.1e-09 67.4 172 33.1
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 1.4e-09 67.0 155 31.0
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.4e-09 67.0 153 32.7
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 1.9e-09 66.6 142 33.8
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 1.9e-09 66.6 162 34.6
Thecc.07G144400 Theobroma cacao HOM05D008142 ORTHO05D009674 1.9e-09 66.6 146 34.2
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 3.2e-09 65.9 153 32.0
MD03G1255500 Malus domestica HOM05D008142 ORTHO05D009674 7.2e-09 64.7 160 34.4
COL.COLO4_17432 Corchorus olitorius HOM05D008142 ORTHO05D009674 4.6e-08 62.0 166 30.7
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 6.1e-08 61.6 160 31.9
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 7.9e-08 61.2 167 34.1
Prupe.4G151500 Prunus persica HOM05D015893 ORTHO05D019166 3.0e-07 59.3 152 29.6
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 3.0e-07 59.3 172 33.1
FvH4_3g16930 Fragaria vesca HOM05D015893 ORTHO05D019166 3.9e-07 58.9 169 30.2
FAN11G0710 Fragaria x ananassa HOM05D015893 ORTHO05D019166 3.9e-07 58.9 169 30.2
FAN16G3477 Fragaria x ananassa HOM05D015893 ORTHO05D019166 3.9e-07 58.9 169 30.2
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 3.9e-07 58.9 178 30.3
Thecc.07G144200 Theobroma cacao HOM05D008142 ORTHO05D009674 5.1e-07 58.5 147 29.9
Glyma.15G247900 Glycine max HOM05D010689 ORTHO05D012855 1.5e-06 57.0 114 36.8
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 2.0e-06 56.6 161 31.7
RcHm_v2.0_Chr5g0028161 Rosa chinensis HOM05D015893 ORTHO05D019166 2.5e-06 56.2 168 31.0
Haze_08481 Corylus avellana HOM05D008142 ORTHO05D009674 3.3e-06 55.8 170 34.1
Cfa019469 Carpinus fangiana HOM05D008142 ORTHO05D009674 5.7e-06 55.1 171 32.7
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 7.4e-06 54.7 132 29.5
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 9.7e-06 54.3 141 33.3
Glyma.13G260100 Glycine max HOM05D010689 ORTHO05D012855 9.7e-06 54.3 134 32.8


User provided reference genes

Program Settings