Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G059400 Phaseolus vulgaris HOM05D007695 ORTHO05D009675 1.6e-49 199.5 136 100.0
VMungo0147G0001 Vigna mungo HOM05D007695 ORTHO05D009675 2.1e-20 102.8 54 88.9
Glyma.08G167800 Glycine max HOM05D007695 ORTHO05D009675 2.7e-20 102.4 117 78.6
Glyma.15G259802 Glycine max HOM05D007695 ORTHO05D009675 3.9e-19 98.6 116 66.4
Lj3g0020370 Lotus japonicus HOM05D007695 ORTHO05D009675 1.8e-16 89.7 119 74.8
TPR.G33812 Trifolium pratense HOM05D007695 ORTHO05D009675 1.9e-13 79.7 99 70.7
Psat1g013560 Pisum sativum HOM05D007695 ORTHO05D009675 5.5e-13 78.2 120 68.3
CiPaw.11G064100 Carya illinoinensis HOM05D007695 ORTHO05D009675 7.2e-13 77.8 125 47.2
Lalb_Chr25g0284741 Lupinus albus HOM05D007695 ORTHO05D009675 3.6e-12 75.5 119 69.7
Gohir.A13G123700 Gossypium hirsutum HOM05D007695 ORTHO05D009675 8.8e-11 70.9 64 60.9
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 1.1e-10 70.5 62 54.8
Gorai.013G142800 Gossypium raimondii HOM05D007695 ORTHO05D009675 1.5e-10 70.1 64 60.9
GSVIVG01036789001 Vitis vinifera HOM05D007695 ORTHO05D009675 1.5e-10 70.1 131 42.7
COL.COLO4_32235 Corchorus olitorius HOM05D007695 ORTHO05D009675 3.3e-10 68.9 63 58.7
Duzib187G1742 Durio zibethinus HOM05D000001 ORTHO05D000003 3.3e-10 68.9 69 56.5
Sabra05G0078900 Salix brachista HOM05D007695 ORTHO05D009675 4.4e-10 68.6 56 62.5
Duzib213G0064 Durio zibethinus HOM05D007695 ORTHO05D009675 5.7e-10 68.2 67 56.7
MD05G1224500 Malus domestica HOM05D007695 ORTHO05D009675 5.7e-10 68.2 47 70.2
Thecc.07G171400 Theobroma cacao HOM05D007695 ORTHO05D009675 5.7e-10 68.2 66 57.6
Potri.007G068500 Populus trichocarpa HOM05D007695 ORTHO05D009675 7.4e-10 67.8 57 61.4
Oeu034976.1 Olea europaea HOM05D000672 ORTHO05D009675 9.7e-10 67.4 126 47.6
Potri.005G095700 Populus trichocarpa HOM05D007695 ORTHO05D009675 9.7e-10 67.4 59 61.0
CSS0012508 Camellia sinensis var. sinensis HOM05D000008 ORTHO05D000005 1.7e-09 66.6 66 54.5
Cfa010552 Carpinus fangiana HOM05D007695 ORTHO05D009675 1.7e-09 66.6 127 63.8
CsaV3_7G022890 Cucumis sativus L. HOM05D007695 ORTHO05D009675 2.2e-09 66.2 122 58.2
MD10G1206200 Malus domestica HOM05D007695 ORTHO05D009675 2.2e-09 66.2 125 48.8
Dinv19595 Davidia involucrata HOM05D007695 ORTHO05D009675 2.8e-09 65.9 55 61.8
Os02g0170200 Oryza sativa ssp. japonica HOM05D007695 ORTHO05D009675 2.8e-09 65.9 38 78.9
QL04p080880 Quercus lobata HOM05D007695 ORTHO05D009675 2.8e-09 65.9 47 66.0
MSTRG.7074 Avicennia marina HOM05D007695 ORTHO05D009675 3.7e-09 65.5 117 60.7
Cc05_g01290 Coffea canephora HOM05D007695 ORTHO05D009675 3.7e-09 65.5 59 55.9
RcHm_v2.0_Chr5g0025651 Rosa chinensis HOM05D007695 ORTHO05D009675 3.7e-09 65.5 41 70.7
Sed0008622 Sechium edule HOM05D007695 ORTHO05D009675 3.7e-09 65.5 56 53.6
Hund12430 Selenicereus undatus HOM05D007695 ORTHO05D009675 4.8e-09 65.1 39 74.4
Hma1.2p1_0119F.1_g056770 Hydrangea macrophylla HOM05D007695 ORTHO05D009675 6.3e-09 64.7 64 56.2
Nitab4.5_0010557g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 6.3e-09 64.7 38 73.7
Nitab4.5_0007560g0010 Nicotiana tabacum HOM05D007695 ORTHO05D009675 8.2e-09 64.3 38 73.7
Zm00001eb233100 Zea mays HOM05D007695 ORTHO05D009675 8.2e-09 64.3 42 71.4
TWI32G1143 Tripterygium wilfordii HOM05D007695 ORTHO05D009675 1.1e-08 63.9 57 59.6
Aqoxy1G01977 Aquilegia oxysepala HOM05D007695 ORTHO05D009675 1.4e-08 63.5 124 62.1
Sc09g0007600 Simmondsia chinensis HOM05D007695 ORTHO05D009675 1.4e-08 63.5 39 71.8
Actinidia37127 Actinidia chinensis HOM05D007695 ORTHO05D009675 1.8e-08 63.2 134 56.7
CANSAT80G0100 Cannabis sativa HOM05D007695 ORTHO05D009675 1.8e-08 63.2 45 64.4
Peaxi162Scf00225g00098 Petunia axillaris HOM05D007695 ORTHO05D009675 1.8e-08 63.2 118 55.9
FAN11G1768 Fragaria x ananassa HOM05D007695 ORTHO05D009675 2.4e-08 62.8 48 56.2
FAN21G0117 Fragaria x ananassa HOM05D007695 ORTHO05D009675 2.4e-08 62.8 41 65.9
FAN25G3643 Fragaria x ananassa HOM05D007695 ORTHO05D009675 2.4e-08 62.8 48 56.2
Peaxi162Scf00225g00095 Petunia axillaris HOM05D007695 ORTHO05D009675 2.4e-08 62.8 37 75.7
ClCG09G022690 Citrullus lanatus HOM05D007695 ORTHO05D009675 3.1e-08 62.4 136 50.0
Rhsim04G0004200 Rhododendron simsii HOM05D007695 ORTHO05D009675 4.1e-08 62.0 130 55.4
PGSC0003DMG400030526 Solanum tuberosum HOM05D007695 ORTHO05D009675 5.3e-08 61.6 123 62.6
Sopen05g004520 Solanum pennellii HOM05D007695 ORTHO05D009675 9.1e-08 60.8 125 63.2
Lsat_1_v5_gn_7_110340 Lactuca sativa HOM05D007695 ORTHO05D009675 1.2e-07 60.5 48 62.5
Ah.16g106010 Amaranthus hybridus HOM05D007695 ORTHO05D009675 2.6e-07 59.3 36 72.2
FvH4_3g15210 Fragaria vesca HOM05D007695 ORTHO05D009675 2.6e-07 59.3 48 54.2
vmacro09774 Vaccinium macrocarpon HOM05D007695 ORTHO05D009675 3.4e-07 58.9 103 60.2
HPP92_016681 Vanilla planifolia HOM05D007695 ORTHO05D009675 3.4e-07 58.9 45 55.6
BcaC08g47483 Brassica carinata HOM05D007695 ORTHO05D009675 4.5e-07 58.5 54 48.1
A07p44310 Brassica napus HOM05D007695 ORTHO05D009675 4.5e-07 58.5 54 48.1
C06p53060 Brassica napus HOM05D007695 ORTHO05D009675 4.5e-07 58.5 54 48.1
BolC6t40323H Brassica oleracea HOM05D007695 ORTHO05D009675 4.5e-07 58.5 54 48.1
CAN.G610.6 Capsicum annuum HOM05D007695 ORTHO05D009675 4.5e-07 58.5 123 58.5
Gohir.D13G127533 Gossypium hirsutum HOM05D007695 ORTHO05D009675 5.9e-07 58.2 141 53.9
Solyc05g008750.3 Solanum lycopersicum HOM05D007695 ORTHO05D009675 5.9e-07 58.2 123 61.0
FAN16G2644 Fragaria x ananassa HOM05D007695 ORTHO05D009675 7.7e-07 57.8 48 52.1
HanXRQChr15g0494421 Helianthus annuus HOM05D007695 ORTHO05D009675 1.3e-06 57.0 70 44.3
PSO384G4287 Papaver somniferum HOM05D007695 ORTHO05D009675 1.3e-06 57.0 34 73.5
SalBow8G0946 Salvia bowleyana HOM05D007695 ORTHO05D009675 1.3e-06 57.0 53 50.9
ECA236G2936 Erigeron canadensis HOM05D007695 ORTHO05D009675 1.7e-06 56.6 56 51.8
Migut.M01534 Erythranthe guttata HOM05D007695 ORTHO05D009675 1.7e-06 56.6 127 35.4
SGA_v2.0_scaffold7G03606 Striga asiatica HOM05D007695 ORTHO05D009675 1.7e-06 56.6 128 45.3
unitig_748.g7621 Utricularia gibba HOM05D000001 ORTHO05D000003 1.7e-06 56.6 53 50.9
Aa31LG4G1810 Aethionema arabicum HOM05D007695 ORTHO05D009675 2.2e-06 56.2 55 47.3
PGR031G0168 Punica granatum HOM05D007695 ORTHO05D009675 2.2e-06 56.2 99 57.6
CARHR072850 Cardamine hirsuta HOM05D007695 ORTHO05D009675 2.9e-06 55.8 52 50.0
AUR62037645 Chenopodium quinoa HOM05D007695 ORTHO05D009675 2.9e-06 55.8 123 56.1
Carub.0002s2607 Capsella rubella HOM05D007695 ORTHO05D009675 3.8e-06 55.5 36 63.9
EL10Ac2g03268 Beta vulgaris HOM05D007695 ORTHO05D009675 6.5e-06 54.7 123 59.3


User provided reference genes

Program Settings