Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 4.9e-114 414.5 205 100.0
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 3.3e-102 375.2 205 91.2
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 9.5e-102 373.6 205 90.7
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 1.3e-98 363.2 205 87.8
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 3.8e-98 361.7 205 87.8
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 1.4e-97 359.8 205 87.3
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 1.9e-97 359.4 206 87.4
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 4.6e-96 354.8 205 85.9
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 5.1e-95 351.3 205 85.4
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 3.4e-91 338.6 205 82.0
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 1.9e-89 332.8 202 79.2
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 1.0e-87 327.0 201 76.6
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 3.0e-87 325.5 201 75.6
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 3.9e-87 325.1 201 76.1
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 6.6e-87 324.3 202 77.2
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 4.3e-86 321.6 207 74.9
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 4.3e-86 321.6 201 74.6
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 4.3e-86 321.6 203 74.9
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 4.3e-86 321.6 201 78.6
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 2.8e-85 318.9 233 69.1
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 2.8e-85 318.9 201 75.1
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 2.8e-85 318.9 197 76.1
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 6.2e-85 317.8 201 74.6
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 8.1e-85 317.4 201 74.1
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 8.1e-85 317.4 201 75.1
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 8.1e-85 317.4 197 75.6
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 8.1e-85 317.4 197 75.6
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 3.1e-84 315.5 202 74.8
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 3.1e-84 315.5 201 75.1
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 6.9e-84 314.3 203 74.9
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 6.9e-84 314.3 208 75.0
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 1.2e-83 313.5 198 74.7
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 2.0e-83 312.8 201 74.6
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 3.4e-83 312.0 201 75.6
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.3e-82 310.1 201 73.6
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 2.2e-82 309.3 191 75.9
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 4.9e-82 308.1 202 73.3
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 1.9e-81 306.2 209 72.7
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 2.4e-81 305.8 200 74.5
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 2.4e-81 305.8 197 72.6
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 5.4e-81 304.7 202 69.3
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 5.4e-81 304.7 193 74.6
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 7.1e-81 304.3 203 69.5
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 9.3e-81 303.9 201 72.1
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 1.6e-80 303.1 203 72.4
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 2.7e-80 302.4 202 68.8
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 2.7e-80 302.4 205 73.7
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 4.6e-80 301.6 202 68.3
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 1.0e-79 300.4 201 70.1
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 1.3e-79 300.1 199 69.8
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 1.3e-79 300.1 205 71.7
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 6.7e-79 297.7 201 69.7
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 8.7e-79 297.4 221 66.1
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 1.9e-78 296.2 200 67.5
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 1.9e-78 296.2 191 74.3
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 2.5e-78 295.8 201 70.1
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 2.5e-78 295.8 191 72.3
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 4.3e-78 295.0 197 72.6
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 2.1e-77 292.7 201 68.2
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 5.3e-76 288.1 218 64.2
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 5.3e-76 288.1 217 65.9
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 9.0e-76 287.3 197 68.5
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 9.0e-76 287.3 198 67.2
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 5.8e-75 284.6 200 67.5
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 5.8e-75 284.6 175 75.4
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 9.9e-75 283.9 190 69.5
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 1.3e-74 283.5 198 68.2
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 4.9e-74 281.6 205 65.4
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 3.2e-73 278.9 180 72.8
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 7.1e-73 277.7 198 62.6
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 3.5e-72 275.4 206 68.9
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 1.3e-71 273.5 198 67.7
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 1.5e-70 270.0 164 76.2
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 7.4e-70 267.7 201 64.2
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 6.2e-69 264.6 189 66.1
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 1.1e-68 263.8 190 65.8
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 2.9e-66 255.8 192 66.1
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 3.8e-66 255.4 201 64.2
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 1.1e-65 253.8 191 63.4
MBI18_g45405_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 8.7e-63 244.2 156 74.4
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 1.1e-62 243.8 202 60.4
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 4.5e-59 231.9 156 69.9
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 2.9e-58 229.2 196 57.7
Sc08g0007560 Simmondsia chinensis HOM05D006956 ORTHO05D008824 2.9e-58 229.2 156 68.6
QL04p076191 Quercus lobata HOM05D006956 ORTHO05D008824 1.2e-48 197.2 125 74.4
QL93p0133_0021 Quercus lobata HOM05D006956 ORTHO05D008824 1.2e-48 197.2 125 74.4
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 4.6e-48 195.3 138 65.9
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 1.3e-45 187.2 186 48.4
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 1.7e-45 186.8 201 48.8
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 6.3e-45 184.9 137 64.2
Prupe.4G139100 Prunus persica HOM05D006956 ORTHO05D008824 2.6e-43 179.5 164 57.3
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 3.4e-43 179.1 146 63.0
Lsat_1_v5_gn_6_63040 Lactuca sativa HOM05D006956 ORTHO05D008824 2.5e-41 172.9 169 53.3
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 1.8e-39 166.8 189 42.9
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 3.0e-39 166.0 126 65.1
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 1.1e-38 164.1 191 44.0
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 6.3e-37 158.3 187 41.7
SEGI_37897 Sequoiadendron giganteum HOM05D006956 ORTHO05D008824 2.0e-35 153.3 132 56.8
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.2e-32 144.1 180 46.1
Glyma.08G170300 Glycine max HOM05D006956 ORTHO05D008824 1.2e-30 137.5 161 54.0
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 7.0e-28 128.3 139 46.0
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.2e-27 127.5 115 55.7
vmacro09782 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 6.1e-24 115.2 63 79.4
Potri.011G142501 Populus trichocarpa HOM05D006956 ORTHO05D008824 1.8e-23 113.6 88 65.9
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 5.2e-23 112.1 84 60.7
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 3.4e-22 109.4 80 65.0
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 7.5e-22 108.2 76 69.7
Lalb_Chr25g0284921 Lupinus albus HOM05D006956 ORTHO05D008824 7.0e-20 101.7 159 42.1
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 2.0e-19 100.1 192 33.3
MD05G1220700 Malus domestica HOM05D006956 ORTHO05D008824 1.9e-17 93.6 63 65.1
RcHm_v2.0_Chr5g0031421 Rosa chinensis HOM05D006956 ORTHO05D008824 7.2e-17 91.7 107 52.3
Cpa.g.sc67.70 Carica papaya HOM05D006956 ORTHO05D008824 4.4e-14 82.4 62 64.5
SHI21449 Sapria himalayana HOM05D000257 ORTHO05D008466 7.8e-11 71.6 39 74.4
TPR.G22507 Trifolium pratense HOM05D006956 ORTHO05D008824 7.3e-09 65.1 37 83.8
Lju41A37T47 Lonicera japonica HOM05D006956 ORTHO05D008824 6.1e-08 62.0 44 65.9


User provided reference genes

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