Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G057400 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 4.3e-32 140.6 65 100.0
Medtr2g069420 Medicago truncatula HOM05D002385 ORTHO05D002245 1.2e-21 105.9 63 73.0
Phvul.005G057200 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 1.5e-21 105.5 67 74.6
Medtr2g069430 Medicago truncatula HOM05D002385 ORTHO05D002245 5.8e-21 103.6 63 74.6
Medtr1g040735 Medicago truncatula HOM05D002385 ORTHO05D002245 2.2e-20 101.7 64 67.2
Medtr1g040775 Medicago truncatula HOM05D002385 ORTHO05D002245 6.5e-20 100.1 64 65.6
Medtr5g042360 Medicago truncatula HOM05D002385 ORTHO05D002245 6.5e-20 100.1 64 65.6
TPR.G9755 Trifolium pratense HOM05D002385 ORTHO05D002245 6.5e-20 100.1 63 69.8
Glyma.08G172300 Glycine max HOM05D002385 ORTHO05D002245 4.2e-19 97.4 64 75.0
Medtr4g091090 Medicago truncatula HOM05D002385 ORTHO05D002245 1.6e-18 95.5 60 71.7
Glyma.08G171400 Glycine max HOM05D002385 ORTHO05D002245 1.1e-16 89.4 65 69.2
Psat1g011360 Pisum sativum HOM05D002385 ORTHO05D002245 2.5e-16 88.2 63 60.3
TPR.G9734 Trifolium pratense HOM05D002385 ORTHO05D002245 2.5e-16 88.2 62 64.5
Psat6g029000 Pisum sativum HOM05D002385 ORTHO05D002245 3.3e-16 87.8 63 63.5
Lj3g0003491 Lotus japonicus HOM05D002385 ORTHO05D002245 4.3e-16 87.4 64 65.6
Ca_03673_v3 Cicer arietinum L. HOM05D002385 ORTHO05D002245 2.8e-15 84.7 55 67.3
Glyma.08G170900 Glycine max HOM05D002385 ORTHO05D002245 2.8e-15 84.7 66 68.2
Glyma.15G256000 Glycine max HOM05D002385 ORTHO05D002245 2.0e-13 78.6 66 65.2
Glyma.08G171300 Glycine max HOM05D002385 ORTHO05D002245 2.7e-10 68.2 65 55.4
Glyma.08G170800 Glycine max HOM05D002385 ORTHO05D002245 3.5e-10 67.8 64 56.2
Lalb_Chr20g0108741 Lupinus albus HOM05D002385 ORTHO05D002245 1.8e-09 65.5 65 55.4
Medtr2g069400 Medicago truncatula HOM05D002385 ORTHO05D002245 1.1e-08 62.8 63 54.0
Lalb_Chr25g0284941 Lupinus albus HOM05D002385 ORTHO05D002245 3.3e-08 61.2 63 47.6
TAR626G0681 Trochodendron aralioides HOM05D002385 ORTHO05D002245 5.7e-08 60.5 71 49.3
PGR031G2469 Punica granatum HOM05D002385 ORTHO05D002245 9.7e-08 59.7 62 53.2
CiPaw.11G059900 Carya illinoinensis HOM05D002385 ORTHO05D002245 1.3e-07 59.3 55 50.9
Ca_03672_v3 Cicer arietinum L. HOM05D002385 ORTHO05D002245 1.3e-07 59.3 64 51.6
Dinv19617 Davidia involucrata HOM05D002385 ORTHO05D002245 1.3e-07 59.3 78 48.7
Lj3g0007335 Lotus japonicus HOM05D002385 ORTHO05D002245 1.3e-07 59.3 60 55.0
arahy.Tifrunner.gnm1.ann1.3UW96L Arachis hypogaea HOM05D002385 ORTHO05D002245 2.2e-07 58.5 64 50.0
Cfa023570 Carpinus fangiana HOM05D002385 ORTHO05D002245 2.2e-07 58.5 40 65.0
Haze_13593 Corylus avellana HOM05D002385 ORTHO05D002245 2.2e-07 58.5 58 53.4
MELO3C012630.2 Cucumis melo HOM05D002385 ORTHO05D002245 2.2e-07 58.5 56 53.6
HanXRQChr11g0335361 Helianthus annuus HOM05D002385 ORTHO05D002245 2.2e-07 58.5 63 50.8
Psat1g003480 Pisum sativum HOM05D002385 ORTHO05D002245 2.2e-07 58.5 64 51.6
QL04p073225 Quercus lobata HOM05D002385 ORTHO05D002245 2.8e-07 58.2 53 56.6
Cpa.g.sc7.104 Carica papaya HOM05D002385 ORTHO05D002245 3.7e-07 57.8 65 50.8
CsaV3_7G022690 Cucumis sativus L. HOM05D002385 ORTHO05D002245 3.7e-07 57.8 56 53.6
Psat1g003560 Pisum sativum HOM05D002385 ORTHO05D002245 4.8e-07 57.4 57 52.6
TWI60G1403 Tripterygium wilfordii HOM05D002385 ORTHO05D002245 4.8e-07 57.4 63 50.8
TPR.G9750 Trifolium pratense HOM05D002385 ORTHO05D002245 6.3e-07 57.0 63 49.2
Oeu048064.1 Olea europaea HOM05D002385 ORTHO05D002245 8.2e-07 56.6 58 50.0
arahy.Tifrunner.gnm1.ann1.7QB2HQ Arachis hypogaea HOM05D002385 ORTHO05D002245 1.1e-06 56.2 69 47.8
Cfa023569 Carpinus fangiana HOM05D002385 ORTHO05D002245 1.1e-06 56.2 39 69.2
Migut.M01554 Erythranthe guttata HOM05D002385 ORTHO05D002245 1.1e-06 56.2 67 46.3
Dinv02957 Davidia involucrata HOM05D002385 ORTHO05D002245 1.4e-06 55.8 68 51.5
Oeu048060.1 Olea europaea HOM05D002385 ORTHO05D002245 1.4e-06 55.8 63 44.4
QL04p061381 Quercus lobata HOM05D002385 ORTHO05D002245 1.4e-06 55.8 58 51.7
QL04p061416 Quercus lobata HOM05D002385 ORTHO05D002245 1.4e-06 55.8 53 56.6
Atru.chr11.2673 Acer truncatum HOM05D002385 ORTHO05D002245 1.8e-06 55.5 60 46.7
Atru.chr8.975 Acer truncatum HOM05D002385 ORTHO05D002245 1.8e-06 55.5 60 46.7
Atru.chr8.976 Acer truncatum HOM05D002385 ORTHO05D002245 1.8e-06 55.5 60 46.7
Eucgr.A00900 Eucalyptus grandis HOM05D002385 ORTHO05D002245 1.8e-06 55.5 63 44.4
Oeu056976.2 Olea europaea HOM05D002385 ORTHO05D002245 1.8e-06 55.5 69 46.4
Sabra16G0021200 Salix brachista HOM05D002385 ORTHO05D002245 1.8e-06 55.5 58 46.6
Sabra16G0025900 Salix brachista HOM05D002385 ORTHO05D002245 1.8e-06 55.5 58 46.6
Actinidia11099 Actinidia chinensis HOM05D002385 ORTHO05D002245 2.4e-06 55.1 67 46.3
Cfa023568 Carpinus fangiana HOM05D002385 ORTHO05D002245 2.4e-06 55.1 53 52.8
Haze_13597 Corylus avellana HOM05D002385 ORTHO05D002245 2.4e-06 55.1 38 65.8
Nn7g38131 Nelumbo nucifera HOM05D002385 ORTHO05D002245 2.4e-06 55.1 71 47.9
unitig_85.g27315 Utricularia gibba HOM05D000063 ORTHO05D002147 2.4e-06 55.1 62 50.0
Haze_13600 Corylus avellana HOM05D002385 ORTHO05D002245 3.1e-06 54.7 39 64.1
Lalb_Chr25g0284961 Lupinus albus HOM05D002385 ORTHO05D002245 3.1e-06 54.7 62 46.8
Prupe.6G185200 Prunus persica HOM05D002385 ORTHO05D002245 3.1e-06 54.7 62 46.8
QL04p061407 Quercus lobata HOM05D002385 ORTHO05D002245 3.1e-06 54.7 59 54.2
Thecc.01G172200 Theobroma cacao HOM05D002385 ORTHO05D002245 3.1e-06 54.7 64 53.1
TAR627G0329 Trochodendron aralioides HOM05D002385 ORTHO05D002245 3.1e-06 54.7 39 71.8
arahy.Tifrunner.gnm1.ann1.H2E4IE Arachis hypogaea HOM05D002385 ORTHO05D002245 4.1e-06 54.3 68 47.1
Cfa023571 Carpinus fangiana HOM05D002385 ORTHO05D002245 4.1e-06 54.3 39 64.1
ClCG09G022550 Citrullus lanatus HOM05D002385 ORTHO05D002245 4.1e-06 54.3 55 52.7
Haze_13596 Corylus avellana HOM05D002385 ORTHO05D002245 4.1e-06 54.3 39 64.1
ATR0763G265 Amborella trichopoda HOM05D002385 ORTHO05D002245 5.3e-06 53.9 65 50.8
Cfa023028 Carpinus fangiana HOM05D002385 ORTHO05D002245 5.3e-06 53.9 59 49.2
Oeu003091.1 Olea europaea HOM05D002385 ORTHO05D002245 5.3e-06 53.9 63 44.4
Phvul.005G057500 Phaseolus vulgaris HOM05D002385 ORTHO05D002245 5.3e-06 53.9 59 50.8
Duzib133G0918 Durio zibethinus HOM05D002385 ORTHO05D002245 6.9e-06 53.5 63 52.4
Eucgr.A00896 Eucalyptus grandis HOM05D002385 ORTHO05D002245 6.9e-06 53.5 63 42.9
Eucgr.A00898 Eucalyptus grandis HOM05D002385 ORTHO05D002245 6.9e-06 53.5 63 42.9
CiPaw.11G059800 Carya illinoinensis HOM05D014462 ORTHO05D018947 9.0e-06 53.1 55 45.5
Glyma.08G170700 Glycine max HOM05D002385 ORTHO05D002245 9.0e-06 53.1 63 47.6
GSVIVG01015781001 Vitis vinifera HOM05D002385 ORTHO05D002245 9.0e-06 53.1 64 54.7
GSVIVG01015789001 Vitis vinifera HOM05D002385 ORTHO05D002245 9.0e-06 53.1 64 54.7


User provided reference genes

Program Settings