Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G056100 Phaseolus vulgaris HOM05D007991 ORTHO05D010158 1.5e-38 162.5 90 100.0
Glyma.08G172800 Glycine max HOM05D007991 ORTHO05D010158 4.0e-20 101.3 89 62.9
TPR.G9765 Trifolium pratense HOM05D007991 ORTHO05D010158 3.4e-19 98.2 89 58.4
Medtr2g069650 Medicago truncatula HOM05D007991 ORTHO05D010158 4.4e-19 97.8 91 57.1
Lalb_Chr19g0133391 Lupinus albus HOM05D007991 ORTHO05D010158 1.4e-17 92.8 89 55.1
Ciclev10023629m.g Citrus clementina HOM05D007991 ORTHO05D010158 7.1e-17 90.5 59 74.6
Lj3g0014492 Lotus japonicus HOM05D007991 ORTHO05D010158 9.2e-17 90.1 58 72.4
Prupe.4G140900 Prunus persica HOM05D007991 ORTHO05D010158 9.2e-17 90.1 56 75.0
Ca_03685_v3 Cicer arietinum L. HOM05D007991 ORTHO05D010158 1.6e-16 89.4 95 54.7
Psat1g011440 Pisum sativum HOM05D007991 ORTHO05D010158 1.6e-16 89.4 57 73.7
Lsat_1_v5_gn_7_112301 Lactuca sativa HOM05D007991 ORTHO05D010158 6.0e-16 87.4 54 75.9
Aqoxy6G00820 Aquilegia oxysepala HOM05D007991 ORTHO05D010158 7.8e-16 87.0 56 73.2
GSVIVG01035227001 Vitis vinifera HOM05D007991 ORTHO05D010158 7.8e-16 87.0 74 56.8
GSVIVG01012568001 Vitis vinifera HOM05D007991 ORTHO05D010158 1.3e-15 86.3 82 54.9
FAN16G1552 Fragaria x ananassa HOM05D007991 ORTHO05D010158 1.7e-15 85.9 83 55.4
Nn7g37867 Nelumbo nucifera HOM05D007991 ORTHO05D010158 1.7e-15 85.9 76 53.9
Sc16g0005380 Simmondsia chinensis HOM05D007991 ORTHO05D010158 1.7e-15 85.9 55 76.4
MD05G1219200 Malus domestica HOM05D007991 ORTHO05D010158 3.0e-15 85.1 76 55.3
ClCG11G016360 Citrullus lanatus HOM05D007991 ORTHO05D010158 3.9e-15 84.7 82 56.1
ClCG11G016370 Citrullus lanatus HOM05D007991 ORTHO05D010158 3.9e-15 84.7 82 56.1
Solyc07g066400.1 Solanum lycopersicum HOM05D007991 ORTHO05D010158 5.1e-15 84.3 53 73.6
Cpa.g.sc10.36 Carica papaya HOM05D007991 ORTHO05D010158 6.6e-15 84.0 56 69.6
FAN25G2658 Fragaria x ananassa HOM05D007991 ORTHO05D010158 6.6e-15 84.0 83 54.2
RcHm_v2.0_Chr5g0026701 Rosa chinensis HOM05D007991 ORTHO05D010158 6.6e-15 84.0 80 57.5
CiPaw.04G012700 Carya illinoinensis HOM05D007991 ORTHO05D010158 8.7e-15 83.6 59 66.1
FAN11G2864 Fragaria x ananassa HOM05D007991 ORTHO05D010158 8.7e-15 83.6 83 54.2
FAN21G1902 Fragaria x ananassa HOM05D007991 ORTHO05D010158 8.7e-15 83.6 83 54.2
Lalb_Chr03g0031611 Lupinus albus HOM05D007991 ORTHO05D010158 8.7e-15 83.6 55 69.1
Peaxi162Scf00452g00812 Petunia axillaris HOM05D007991 ORTHO05D010158 8.7e-15 83.6 55 70.9
PGSC0003DMG400022239 Solanum tuberosum HOM05D007991 ORTHO05D010158 8.7e-15 83.6 53 73.6
Sopen07g034570 Solanum pennellii HOM05D007991 ORTHO05D010158 1.1e-14 83.2 53 75.5
Atru.chr8.1056 Acer truncatum HOM05D007991 ORTHO05D010158 1.9e-14 82.4 56 69.6
Ah.07g206310 Amaranthus hybridus HOM05D007991 ORTHO05D010158 1.9e-14 82.4 58 63.8
TWI39G0184 Tripterygium wilfordii HOM05D007991 ORTHO05D010158 1.9e-14 82.4 53 71.7
EL10Ac4g08566 Beta vulgaris HOM05D007991 ORTHO05D010158 2.5e-14 82.0 80 56.2
Manes.06G170500 Manihot esculenta HOM05D007991 ORTHO05D010158 3.3e-14 81.6 75 56.0
AT3G12960 Arabidopsis thaliana HOM05D007991 ORTHO05D010158 4.3e-14 81.3 61 60.7
Manes.06G170901 Manihot esculenta HOM05D007991 ORTHO05D010158 4.3e-14 81.3 83 51.8
HanXRQChr11g0334671 Helianthus annuus HOM05D007991 ORTHO05D010158 5.6e-14 80.9 54 70.4
COL.COLO4_04148 Corchorus olitorius HOM05D007991 ORTHO05D010158 9.6e-14 80.1 53 69.8
COL.COLO4_28875 Corchorus olitorius HOM05D007991 ORTHO05D010158 9.6e-14 80.1 53 69.8
MELO3C010561.2 Cucumis melo HOM05D007991 ORTHO05D010158 9.6e-14 80.1 70 60.0
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 9.6e-14 80.1 55 69.1
CANSAT80G1088 Cannabis sativa HOM05D007991 ORTHO05D010158 1.2e-13 79.7 89 51.7
PGR042G3415 Punica granatum HOM05D007991 ORTHO05D010158 1.2e-13 79.7 56 64.3
Aa31LG8G190 Aethionema arabicum HOM05D007991 ORTHO05D010158 2.1e-13 79.0 82 50.0
AL3G24640 Arabidopsis lyrata HOM05D007991 ORTHO05D010158 2.1e-13 79.0 61 59.0
Cfa019429 Carpinus fangiana HOM05D007991 ORTHO05D010158 2.1e-13 79.0 50 72.0
ECA236G0423 Erigeron canadensis HOM05D007991 ORTHO05D010158 2.1e-13 79.0 57 64.9
QL04p074011 Quercus lobata HOM05D007991 ORTHO05D010158 2.1e-13 79.0 58 63.8
CAN.G943.33 Capsicum annuum HOM05D007991 ORTHO05D010158 2.8e-13 78.6 53 66.0
Thhalv10022193m.g Eutrema salsugineum HOM05D007991 ORTHO05D010158 3.6e-13 78.2 62 61.3
BraA01t04089Z Brassica rapa HOM05D007991 ORTHO05D010158 4.7e-13 77.8 61 59.0
CARHR087490 Cardamine hirsuta HOM05D007991 ORTHO05D010158 6.2e-13 77.4 79 50.6
BcaC09g48284 Brassica carinata HOM05D007991 ORTHO05D010158 8.1e-13 77.0 80 50.0
C01p52180 Brassica napus HOM05D007991 ORTHO05D010158 8.1e-13 77.0 80 50.0
BolC1t05158H Brassica oleracea HOM05D007991 ORTHO05D010158 8.1e-13 77.0 80 50.0
BcaB04g21024 Brassica carinata HOM05D007991 ORTHO05D010158 1.8e-12 75.9 55 60.0
Carub.0003s1230 Capsella rubella HOM05D007991 ORTHO05D010158 2.4e-12 75.5 74 48.6
Gorai.007G003200 Gossypium raimondii HOM05D007991 ORTHO05D010158 2.4e-12 75.5 58 58.6
MBI02_g12653_MAGBIO Magnolia biondii HOM05D007991 ORTHO05D010158 2.4e-12 75.5 53 64.2
Gohir.A11G002600 Gossypium hirsutum HOM05D007991 ORTHO05D010158 3.1e-12 75.1 58 58.6
SalBow2G0434 Salvia bowleyana HOM05D007991 ORTHO05D010158 5.3e-12 74.3 75 50.7
PSO675G0275 Papaver somniferum HOM05D007991 ORTHO05D010158 1.5e-11 72.8 82 48.8
Sp3g11110 Schrenkiella parvula HOM05D007991 ORTHO05D010158 1.5e-11 72.8 61 55.7
unitig_8.g4768 Utricularia gibba HOM05D007991 ORTHO05D010158 2.6e-11 72.0 54 63.0
CSS0001388 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 4.4e-11 71.2 54 63.0
Gohir.D11G002200 Gossypium hirsutum HOM05D007991 ORTHO05D010158 4.4e-11 71.2 58 55.2
Nn4g23994 Nelumbo nucifera HOM05D007991 ORTHO05D010158 5.8e-11 70.9 76 51.3
Duzib205G1447 Durio zibethinus HOM05D007991 ORTHO05D010158 7.6e-11 70.5 52 59.6
Sed0025657 Sechium edule HOM05D007991 ORTHO05D010158 1.7e-10 69.3 61 55.7
Nitab4.5_0008437g0010 Nicotiana tabacum HOM05D007991 ORTHO05D010158 2.2e-10 68.9 53 64.2
MD05G1300500 Malus domestica HOM05D007991 ORTHO05D010158 8.4e-10 67.0 48 68.8
Os08g0104400 Oryza sativa ssp. japonica HOM05D007991 ORTHO05D010158 1.4e-09 66.2 58 48.3
CSS0033446 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 2.4e-09 65.5 55 58.2
Zm00001eb260130 Zea mays HOM05D007991 ORTHO05D010158 4.6e-08 61.2 75 45.3


User provided reference genes

Program Settings