Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G052000 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 3.9e-40 167.5 78 100.0
Phvul.008G181300 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.9e-27 124.8 76 75.0
Phvul.006G011400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 8.0e-25 116.7 76 72.4
Phvul.005G076000 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.7e-22 109.0 70 64.3
Phvul.010G083800 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 3.7e-22 107.8 70 67.1
Phvul.001G100600 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 8.3e-22 106.7 70 65.7
Phvul.002G150300 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 1.1e-21 106.3 70 64.3
Phvul.010G071400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.4e-21 105.9 71 64.8
Phvul.006G022100 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.8e-21 105.5 71 64.8
Phvul.005G038000 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.4e-21 105.1 71 63.4
Phvul.011G148300 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 4.1e-21 104.4 70 64.3
Phvul.002G065100 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 9.1e-21 103.2 70 62.9
Phvul.002G169500 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 1.6e-20 102.4 70 62.9
Phvul.002G097600 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.7e-20 101.7 71 62.0
Phvul.009G191700 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 3.5e-20 101.3 69 59.4
Phvul.008G129400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.3e-19 99.4 70 61.4
Phvul.011G095800 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.3e-19 99.4 70 61.4
Phvul.009G122000 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.7e-19 99.0 75 57.3
Phvul.009G219600 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.7e-19 99.0 71 59.2
Phvul.004G053900 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.3e-19 98.6 75 57.3
Phvul.008G165300 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.3e-19 98.6 70 61.4
Phvul.001G168600 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.9e-19 98.2 75 57.3
Phvul.009G019700 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.9e-19 98.2 71 60.6
Phvul.001G120000 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 3.8e-19 97.8 68 58.8
Phvul.003G058500 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.9e-18 95.5 67 58.2
Phvul.007G097500 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.9e-18 95.5 69 58.0
Phvul.003G110700 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 5.5e-18 94.0 70 60.0
Phvul.003G113600 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 7.2e-18 93.6 73 53.4
Phvul.007G151400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 9.5e-18 93.2 76 55.3
Phvul.007G095200 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.1e-17 92.0 76 52.6
Phvul.008G112650 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 6.1e-17 90.5 60 70.0
Phvul.003G069400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 8.0e-17 90.1 75 54.7
Glyma.17G252900 Glycine max HOM05D005504 ORTHO05D002688 1.5e-15 85.9 64 53.1
Phvul.007G095700 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 3.4e-15 84.7 57 63.2
Phvul.009G207400 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 3.4e-15 84.7 59 62.7
Phvul.009G192600 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 1.7e-14 82.4 64 56.2
Phvul.003G065800 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.8e-13 79.0 54 59.3
Phvul.001G156300 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.6e-12 75.9 70 51.4
Phvul.008G167900 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 3.5e-12 74.7 71 50.7
arahy.Tifrunner.gnm1.ann1.97STDM Arachis hypogaea HOM05D000034 ORTHO05D002688 2.3e-11 72.0 69 42.0
Lj1g0004986 Lotus japonicus HOM05D000034 ORTHO05D002688 3.9e-11 71.2 69 39.1
Lj1g0008887 Lotus japonicus HOM05D000034 ORTHO05D002688 3.9e-11 71.2 69 39.1
arahy.Tifrunner.gnm1.ann1.G2X2VF Arachis hypogaea HOM05D000034 ORTHO05D002688 5.0e-11 70.9 69 40.6
arahy.Tifrunner.gnm1.ann1.71FTPI Arachis hypogaea HOM05D000034 ORTHO05D002688 6.6e-11 70.5 69 40.6
arahy.Tifrunner.gnm1.ann1.7VN967 Arachis hypogaea HOM05D000034 ORTHO05D002688 6.6e-11 70.5 69 40.6
arahy.Tifrunner.gnm1.ann1.ZA5JKI Arachis hypogaea HOM05D000034 ORTHO05D002688 6.6e-11 70.5 69 40.6
arahy.Tifrunner.gnm1.ann1.BVAS0V Arachis hypogaea HOM05D000034 ORTHO05D002688 1.1e-10 69.7 69 40.6
arahy.Tifrunner.gnm1.ann1.7N13V0 Arachis hypogaea HOM05D000034 ORTHO05D002688 1.9e-10 68.9 69 42.0
arahy.Tifrunner.gnm1.ann1.MI9789 Arachis hypogaea HOM05D000034 ORTHO05D002688 2.5e-10 68.6 69 40.6
Phvul.004G040600 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 2.5e-10 68.6 50 54.0
arahy.Tifrunner.gnm1.ann1.C92MA9 Arachis hypogaea HOM05D000034 ORTHO05D002688 3.3e-10 68.2 69 39.1
arahy.Tifrunner.gnm1.ann1.UA7YVD Arachis hypogaea HOM05D000034 ORTHO05D002688 4.3e-10 67.8 69 39.1
Lj1g0022373 Lotus japonicus HOM05D000034 ORTHO05D002688 4.3e-10 67.8 63 41.3
arahy.Tifrunner.gnm1.ann1.ZJZP2C Arachis hypogaea HOM05D000034 ORTHO05D002688 7.3e-10 67.0 69 39.1
Phvul.006G039300 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 7.3e-10 67.0 45 62.2
Lj1g0018328 Lotus japonicus HOM05D000034 ORTHO05D002688 9.5e-10 66.6 63 41.3
Lalb_Chr18g0055031 Lupinus albus HOM05D000034 ORTHO05D002688 9.5e-10 66.6 68 42.6
arahy.Tifrunner.gnm1.ann1.HX5DKE Arachis hypogaea HOM05D000034 ORTHO05D002688 1.2e-09 66.2 69 37.7
Glyma.02G129632 Glycine max HOM05D000034 ORTHO05D002688 1.2e-09 66.2 68 36.8
Glyma.07G272050 Glycine max HOM05D000034 ORTHO05D002688 1.2e-09 66.2 68 36.8
Glyma.10G052850 Glycine max HOM05D000034 ORTHO05D002688 1.2e-09 66.2 68 36.8
Glyma.15G163350 Glycine max HOM05D000034 ORTHO05D002688 1.2e-09 66.2 68 36.8
Atru.chr1.2748 Acer truncatum HOM05D005504 ORTHO05D002688 1.6e-09 65.9 63 42.9
arahy.Tifrunner.gnm1.ann1.9Y5MLW Arachis hypogaea HOM05D000034 ORTHO05D002688 1.6e-09 65.9 69 37.7
arahy.Tifrunner.gnm1.ann1.0842UC Arachis hypogaea HOM05D000034 ORTHO05D002688 2.1e-09 65.5 69 37.7
Lj3g0000148 Lotus japonicus HOM05D005504 ORTHO05D002688 4.7e-09 64.3 56 44.6
Lsat_1_v5_gn_3_28480 Lactuca sativa HOM05D005504 ORTHO05D002688 1.8e-08 62.4 63 44.4
CSS0003405 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 2.3e-08 62.0 68 36.8
arahy.Tifrunner.gnm1.ann1.0J418G Arachis hypogaea HOM05D000034 ORTHO05D002688 5.2e-08 60.8 58 43.1
Phvul.003G119600 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 5.2e-08 60.8 35 68.6
arahy.Tifrunner.gnm1.ann1.C19S8A Arachis hypogaea HOM05D000034 ORTHO05D000037 6.8e-08 60.5 58 44.8
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 1.5e-07 59.3 58 43.1
Phvul.010G084700 Phaseolus vulgaris HOM05D005504 ORTHO05D000585 1.5e-07 59.3 70 44.3
arahy.Tifrunner.gnm1.ann1.VCX407 Arachis hypogaea HOM05D000034 ORTHO05D002688 2.0e-07 58.9 62 38.7
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 2.6e-07 58.5 70 40.0
CSS0036183 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 2.6e-07 58.5 68 35.3
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.6e-07 58.5 62 40.3
arahy.Tifrunner.gnm1.ann1.A110NB Arachis hypogaea HOM05D000034 ORTHO05D002688 3.4e-07 58.2 58 43.1
Phvul.002G149100 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 4.4e-07 57.8 75 42.7
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.8e-07 57.4 61 37.7
Atru.chr13.1509 Acer truncatum HOM05D005504 ORTHO05D002688 7.5e-07 57.0 70 38.6
arahy.Tifrunner.gnm1.ann1.5RUD0X Arachis hypogaea HOM05D000034 ORTHO05D002688 7.5e-07 57.0 69 36.2
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 9.8e-07 56.6 64 37.5
arahy.Tifrunner.gnm1.ann1.TXJ7KC Arachis hypogaea HOM05D000034 ORTHO05D002688 1.3e-06 56.2 58 41.4
ECA248G2768 Erigeron canadensis HOM05D005504 ORTHO05D002688 1.3e-06 56.2 70 35.7
Phvul.009G017400 Phaseolus vulgaris HOM05D005504 ORTHO05D002688 1.3e-06 56.2 36 61.1
arahy.Tifrunner.gnm1.ann1.PB5I7L Arachis hypogaea HOM05D000034 ORTHO05D002688 1.7e-06 55.8 70 32.9
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 1.7e-06 55.8 61 36.1
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 2.2e-06 55.5 63 39.7
CSS0028977 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 2.2e-06 55.5 62 35.5
ECA238G0287 Erigeron canadensis HOM05D005504 ORTHO05D002688 3.7e-06 54.7 71 38.0
Glyma.04G118800 Glycine max HOM05D005504 ORTHO05D002688 4.9e-06 54.3 37 51.4
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 6.4e-06 53.9 63 38.1
arahy.Tifrunner.gnm1.ann1.AAD92C Arachis hypogaea HOM05D000034 ORTHO05D002688 6.4e-06 53.9 58 36.2
arahy.Tifrunner.gnm1.ann1.QZM42C Arachis hypogaea HOM05D000034 ORTHO05D002688 6.4e-06 53.9 67 37.3
VMungo1080G0120 Vigna mungo HOM05D005504 ORTHO05D002688 6.4e-06 53.9 73 42.5
arahy.Tifrunner.gnm1.ann1.PT170J Arachis hypogaea HOM05D000034 ORTHO05D002688 8.3e-06 53.5 68 38.2


User provided reference genes

Program Settings