Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 1.9e-214 748.8 363 100.0
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 6.3e-181 637.5 366 85.8
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 5.3e-180 634.4 363 84.8
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 1.6e-176 622.9 354 86.7
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 2.7e-160 568.9 364 77.5
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 1.4e-159 566.6 369 77.8
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 3.3e-158 562.0 374 75.4
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 1.8e-156 556.2 374 74.9
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 5.9e-155 551.2 368 75.0
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 7.7e-155 550.8 370 75.1
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 5.7e-142 508.1 354 70.9
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 1.7e-138 496.5 367 66.2
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 5.6e-137 491.5 342 69.3
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 5.2e-135 485.0 364 66.2
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 1.2e-131 473.8 366 63.7
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 1.7e-130 469.9 345 65.8
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 2.3e-130 469.5 337 68.0
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 6.6e-130 468.0 349 65.3
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 4.3e-129 465.3 285 79.6
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.3e-125 453.8 334 65.6
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 2.2e-125 453.0 340 65.0
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 3.7e-125 452.2 339 65.5
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 3.7e-125 452.2 368 62.2
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 4.9e-125 451.8 369 61.0
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 1.1e-124 450.7 340 63.8
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 2.4e-124 449.5 327 66.4
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 3.2e-124 449.1 319 67.1
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 3.2e-124 449.1 319 67.4
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 1.2e-123 447.2 349 64.5
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 1.6e-123 446.8 376 60.1
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 2.1e-123 446.4 342 64.6
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 3.5e-123 445.7 340 63.2
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 4.6e-123 445.3 337 65.6
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 4.6e-123 445.3 344 62.8
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 1.0e-122 444.1 340 62.4
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 2.3e-122 443.0 340 65.6
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 5.0e-122 441.8 329 66.3
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 5.0e-122 441.8 336 64.6
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.1e-121 440.7 330 64.8
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 1.1e-121 440.7 336 63.7
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 1.9e-121 439.9 329 64.7
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 4.3e-121 438.7 342 63.7
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 2.1e-120 436.4 344 64.2
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 2.8e-120 436.0 290 71.7
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 6.2e-120 434.9 367 58.9
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 8.1e-120 434.5 338 66.6
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 1.4e-119 433.7 336 62.8
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 3.1e-119 432.6 306 68.6
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 3.1e-119 432.6 340 62.9
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 4.0e-119 432.2 377 59.4
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 8.9e-119 431.0 342 63.2
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 1.2e-118 430.6 341 62.2
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 2.0e-118 429.9 337 62.9
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 2.6e-118 429.5 346 60.7
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 9.9e-118 427.6 293 69.3
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 1.7e-117 426.8 363 58.4
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 4.9e-117 425.2 334 61.4
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 6.4e-117 424.9 356 60.7
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 2.4e-116 422.9 331 61.6
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 3.2e-116 422.5 341 62.2
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 5.4e-116 421.8 342 60.5
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 1.6e-115 420.2 314 65.0
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 2.1e-115 419.9 362 58.0
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 2.7e-115 419.5 374 57.5
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 3.5e-115 419.1 338 59.2
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 1.3e-114 417.2 361 58.4
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 1.3e-114 417.2 362 58.8
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 1.7e-114 416.8 334 59.6
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 2.3e-114 416.4 354 58.5
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 1.1e-113 414.1 354 58.2
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 1.9e-113 413.3 373 57.1
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 2.5e-113 412.9 338 60.4
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 2.5e-113 412.9 350 59.1
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 1.6e-112 410.2 381 55.4
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 6.2e-112 408.3 336 59.8
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 6.2e-112 408.3 346 59.0
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 8.1e-112 407.9 361 58.2
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 1.1e-111 407.5 360 59.2
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 2.4e-111 406.4 357 58.0
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 3.1e-111 406.0 364 57.4
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 4.0e-111 405.6 359 57.4
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 8.9e-111 404.4 355 58.0
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 1.2e-110 404.1 360 56.9
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 2.0e-110 403.3 341 58.7
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 3.4e-110 402.5 303 64.7
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 3.4e-110 402.5 330 61.5
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 4.4e-110 402.1 342 57.3
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 7.1e-108 394.8 350 57.7
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 3.0e-106 389.4 339 58.1
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 4.0e-103 379.0 256 71.5
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 5.2e-103 378.6 337 57.9
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 2.0e-102 376.7 362 54.7
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 8.7e-98 361.3 256 70.3
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 2.1e-96 356.7 330 57.6
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 9.3e-92 341.3 342 52.6
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 6.0e-91 338.6 262 60.3
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 1.8e-90 337.0 314 53.8
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 1.1e-84 317.8 364 51.1
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 7.1e-84 315.1 265 61.1
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 1.3e-80 304.3 272 55.9
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 8.2e-80 301.6 244 62.7
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 2.0e-78 297.0 328 47.6
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 3.4e-78 296.2 248 61.3
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 7.6e-78 295.0 323 52.0
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 2.9e-77 293.1 319 51.7
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 2.2e-72 276.9 313 49.8
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 6.3e-72 275.4 319 48.3
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 6.9e-71 271.9 252 54.0
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 1.4e-68 264.2 267 50.2
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 2.7e-67 260.0 225 57.8
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 1.0e-66 258.1 222 59.5
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 2.2e-64 250.4 231 52.8
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 2.3e-58 230.3 157 72.0
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 1.7e-56 224.2 202 58.9
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 5.2e-50 202.6 155 64.5
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 4.1e-47 193.0 126 69.8
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 1.3e-45 188.0 386 33.7
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 9.4e-44 181.8 121 73.6
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 3.6e-43 179.9 429 33.3
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 6.1e-43 179.1 168 58.3
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 1.4e-39 167.9 283 38.2
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 1.6e-38 164.5 127 57.5
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 1.2e-35 154.8 109 74.3
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 4.7e-35 152.9 122 57.4
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 2.9e-29 133.7 85 72.9
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 2.3e-26 124.0 127 57.5
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 2.8e-24 117.1 92 58.7
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 5.0e-21 106.3 71 70.4
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 1.1e-20 105.1 61 80.3
Cfa023409 Carpinus fangiana HOM05D006002 ORTHO05D126491 2.6e-09 67.4 180 31.7
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 4.4e-09 66.6 56 64.3
CAN.G548.23 Capsicum annuum HOM05D006002 ORTHO05D007651 1.9e-07 61.2 120 36.7


User provided reference genes

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