Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 2.2e-221 771.9 380 100.0
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 8.5e-205 716.8 380 92.6
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 8.5e-205 716.8 372 93.8
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 9.8e-193 676.8 377 87.0
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 2.3e-186 655.6 348 92.2
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 2.0e-185 652.5 380 83.9
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 1.2e-182 643.3 379 82.8
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 4.5e-182 641.3 377 82.0
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 9.5e-180 633.6 377 81.2
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 1.2e-177 626.7 377 79.8
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 6.6e-173 610.9 381 79.8
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 2.5e-172 609.0 381 79.3
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 7.3e-172 607.4 380 77.9
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 9.5e-172 607.1 381 78.7
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 1.2e-171 606.7 381 78.5
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 2.1e-171 605.9 382 78.5
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 8.0e-171 604.0 381 77.7
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 1.4e-170 603.2 379 77.6
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 3.1e-170 602.1 382 78.3
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 3.1e-170 602.1 380 78.9
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 5.2e-170 601.3 381 79.3
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 2.6e-169 599.0 380 77.1
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 5.8e-169 597.8 381 78.2
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 5.8e-169 597.8 381 78.5
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 7.5e-169 597.4 378 77.2
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 2.2e-168 595.9 382 77.5
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 2.2e-168 595.9 406 73.4
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 3.7e-168 595.1 381 77.7
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 1.9e-167 592.8 379 77.0
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 3.2e-167 592.0 381 77.4
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 4.1e-167 591.7 392 75.8
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 1.7e-165 586.3 380 77.6
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 1.7e-165 586.3 380 75.5
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 5.0e-165 584.7 381 76.1
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 8.6e-165 583.9 380 75.5
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 1.5e-164 583.2 345 81.7
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 2.5e-164 582.4 377 77.2
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 4.7e-163 578.2 400 72.2
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 1.1e-162 577.0 381 76.4
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 3.1e-162 575.5 380 74.7
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 4.0e-162 575.1 377 75.6
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 1.5e-161 573.2 377 75.1
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 1.3e-160 570.1 318 84.6
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 1.3e-160 570.1 382 74.1
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 8.3e-160 567.4 378 74.1
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 1.1e-159 567.0 380 73.9
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 1.9e-159 566.2 382 74.6
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 2.4e-159 565.8 400 72.2
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 7.1e-159 564.3 379 73.9
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 7.1e-159 564.3 363 77.4
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 9.2e-159 563.9 379 72.8
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 3.5e-158 562.0 384 72.7
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 4.6e-158 561.6 381 72.7
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 7.8e-158 560.8 379 73.6
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 1.0e-157 560.5 381 73.8
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 1.0e-157 560.5 379 73.6
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 3.9e-157 558.5 378 72.5
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 6.6e-157 557.8 381 73.5
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 8.6e-157 557.4 376 72.9
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 1.5e-156 556.6 382 73.0
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 5.6e-156 554.7 368 75.8
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 7.3e-156 554.3 318 82.7
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 1.6e-155 553.1 347 77.5
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 2.8e-155 552.4 367 75.7
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 3.6e-155 552.0 381 71.9
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 6.2e-155 551.2 379 72.6
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 1.1e-154 550.4 381 70.3
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 2.4e-154 549.3 381 70.3
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 2.4e-154 549.3 382 71.7
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 2.4e-154 549.3 377 70.6
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 5.8e-153 544.7 383 70.5
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 9.9e-153 543.9 381 70.6
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 9.9e-153 543.9 381 70.6
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 1.7e-152 543.1 349 78.8
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 2.9e-152 542.3 378 70.1
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 2.9e-152 542.3 327 78.3
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 4.9e-152 541.6 382 70.4
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 6.4e-152 541.2 378 70.6
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 8.4e-152 540.8 381 70.3
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 8.4e-152 540.8 378 70.6
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 1.1e-151 540.4 382 70.4
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 1.1e-151 540.4 376 70.2
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 4.1e-151 538.5 332 77.1
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 4.1e-151 538.5 399 68.2
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 4.1e-151 538.5 381 70.1
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 4.1e-151 538.5 386 71.8
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 4.1e-151 538.5 307 82.7
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 5.4e-151 538.1 316 78.8
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 3.5e-150 535.4 381 69.8
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 3.5e-150 535.4 381 69.8
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 7.8e-150 534.3 318 79.9
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 3.0e-149 532.3 381 68.2
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 1.9e-148 529.6 381 68.8
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 5.6e-148 528.1 356 73.0
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 9.6e-148 527.3 316 79.7
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 1.6e-147 526.6 336 74.4
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 2.1e-147 526.2 313 79.6
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 2.8e-147 525.8 315 77.8
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 8.1e-147 524.2 381 68.0
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 1.8e-146 523.1 381 67.7
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 1.8e-146 523.1 381 67.7
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 2.4e-146 522.7 349 77.1
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 2.4e-146 522.7 315 78.4
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 4.0e-146 521.9 351 72.6
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 4.0e-146 521.9 314 76.4
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 1.7e-144 516.5 380 68.4
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 2.9e-144 515.8 383 66.8
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 2.9e-144 515.8 380 68.4
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 4.2e-143 511.9 315 76.8
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 5.4e-143 511.5 381 64.3
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 9.3e-143 510.8 380 67.1
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 2.1e-142 509.6 381 67.2
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 4.6e-142 508.4 317 74.8
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 6.0e-142 508.1 378 68.0
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 3.0e-141 505.8 316 74.4
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 2.1e-139 499.6 326 73.6
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 4.8e-139 498.4 331 70.1
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 2.4e-138 496.1 348 71.6
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 1.5e-137 493.4 315 74.9
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 8.4e-136 487.6 301 73.4
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 6.0e-134 481.5 352 69.0
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 2.1e-131 473.0 306 71.9
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 2.8e-131 472.6 327 71.6
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 2.4e-130 469.5 380 62.1
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 8.4e-128 461.1 351 67.8
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 4.2e-127 458.8 381 62.7
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 9.6e-124 447.6 339 66.1
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 1.3e-123 447.2 327 71.6
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 6.2e-123 444.9 271 77.5
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 1.1e-122 444.1 293 68.6
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 8.4e-120 434.5 241 85.1
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 2.1e-118 429.9 315 62.9
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 3.0e-117 426.0 296 63.5
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 6.9e-114 414.8 265 76.2
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 1.7e-112 410.2 305 61.6
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 3.2e-111 406.0 261 77.4
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 7.9e-110 401.4 329 56.8
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 8.2e-107 391.3 234 75.2
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 2.6e-105 386.3 335 55.5
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 3.8e-104 382.5 296 60.8
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 1.6e-102 377.1 233 78.5
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 1.1e-100 370.9 381 51.7
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 3.6e-94 349.4 234 70.1
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 3.6e-94 349.4 196 84.2
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 8.0e-94 348.2 196 84.2
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 2.0e-92 343.6 236 72.5
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 2.4e-90 336.7 226 73.9
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 2.7e-78 296.6 211 73.9
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 1.5e-71 274.2 343 45.8
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 2.5e-71 273.5 348 42.5
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 4.0e-69 266.2 219 62.6
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 2.4e-66 256.9 304 44.7
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 1.6e-65 254.2 296 45.6
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 2.7e-65 253.4 321 42.7
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 8.0e-54 215.3 153 72.5
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 9.8e-52 208.4 185 63.2
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 1.3e-48 198.0 114 78.9
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 2.4e-42 177.2 293 38.2
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 5.2e-37 159.5 131 64.9
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 1.5e-36 157.9 94 81.9
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 3.4e-36 156.8 92 82.6
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 1.7e-35 154.5 131 63.4
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 3.8e-35 153.3 92 80.4
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 8.4e-35 152.1 94 78.7
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 1.4e-34 151.4 131 61.8
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 2.3e-32 144.1 98 78.6
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 2.0e-28 131.0 73 82.2
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 2.9e-27 127.1 357 28.3
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 1.9e-26 124.4 72 77.8
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 4.2e-26 123.2 66 84.8
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 4.3e-23 113.2 133 49.6
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 7.3e-23 112.5 92 66.3
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.3e-22 111.7 71 74.6
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 4.0e-21 106.7 116 51.7
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 3.8e-19 100.1 103 57.3
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 3.5e-17 93.6 61 68.9
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 2.5e-15 87.4 51 78.4
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 9.0e-13 79.0 245 29.0
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 1.0e-11 75.5 47 74.5
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 1.7e-11 74.7 42 81.0
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 3.2e-10 70.5 46 67.4
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 1.1e-07 62.0 42 66.7
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 1.1e-07 62.0 42 66.7
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 2.5e-07 60.8 34 85.3
Hma1.2p1_1039F.1_g250810 Hydrangea macrophylla HOM05D001854 ORTHO05D001800 3.7e-06 57.0 39 69.2


User provided reference genes

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