Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 1.2e-160 569.7 281 100.0
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 2.8e-128 462.2 286 83.9
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 4.6e-115 418.3 285 76.1
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 1.2e-110 403.7 293 72.7
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 6.1e-107 391.3 273 74.4
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 8.7e-106 387.5 281 74.0
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 3.8e-93 345.5 260 70.0
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 4.8e-88 328.6 316 57.0
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 1.6e-86 323.6 281 59.8
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 2.5e-84 316.2 284 57.0
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 8.0e-83 311.2 281 56.9
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 3.0e-82 309.3 223 65.0
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 8.8e-82 307.8 247 62.8
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 1.5e-81 307.0 223 64.6
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 1.5e-81 307.0 241 61.0
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 2.0e-81 306.6 223 71.7
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 2.6e-81 306.2 223 64.6
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.6e-81 306.2 210 70.0
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 3.3e-81 305.8 214 65.0
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 4.4e-81 305.4 264 58.7
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 9.7e-81 304.3 250 62.0
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 1.7e-80 303.5 208 66.3
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 1.7e-80 303.5 264 58.3
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 1.8e-79 300.1 224 62.9
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 2.4e-79 299.7 259 57.5
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 4.1e-79 298.9 224 62.1
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 5.3e-79 298.5 233 61.8
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 7.0e-79 298.1 215 64.2
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 2.0e-78 296.6 217 63.6
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 2.0e-78 296.6 284 58.1
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 2.0e-78 296.6 248 58.1
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 2.0e-78 296.6 213 64.3
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 3.5e-78 295.8 217 63.1
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 5.9e-78 295.0 274 54.0
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 7.7e-78 294.7 216 63.4
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 1.0e-77 294.3 217 63.6
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.0e-77 294.3 216 64.4
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 1.3e-77 293.9 223 63.7
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 2.9e-77 292.7 219 61.6
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 3.8e-77 292.4 240 57.9
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 3.8e-77 292.4 195 71.8
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 5.0e-77 292.0 215 63.7
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.1e-76 290.8 203 69.0
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 1.5e-76 290.4 240 57.5
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 2.5e-76 289.7 242 58.3
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 2.5e-76 289.7 275 57.1
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 3.2e-76 289.3 209 65.1
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 3.2e-76 289.3 202 67.8
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 5.5e-76 288.5 290 51.7
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 5.5e-76 288.5 216 61.6
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 1.6e-75 287.0 268 54.9
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 2.1e-75 286.6 282 51.4
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 3.6e-75 285.8 205 66.3
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 6.1e-75 285.0 271 55.7
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 8.0e-75 284.6 268 55.6
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 1.4e-74 283.9 268 54.5
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 4.0e-74 282.3 245 56.3
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 4.0e-74 282.3 214 64.5
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 8.8e-74 281.2 306 49.3
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 1.2e-73 280.8 217 60.8
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 1.2e-73 280.8 207 60.9
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 1.5e-73 280.4 217 61.3
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 2.0e-73 280.0 204 65.2
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 2.0e-73 280.0 230 60.4
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 5.9e-70 268.5 205 60.0
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 5.0e-69 265.4 211 57.8
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 3.2e-68 262.7 229 57.6
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 7.2e-68 261.5 203 58.6
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 2.1e-67 260.0 205 58.5
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 2.8e-67 259.6 206 62.1
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 3.4e-65 252.7 247 50.6
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 2.8e-64 249.6 213 54.9
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 2.8e-64 249.6 211 57.3
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 3.7e-64 249.2 182 64.3
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 6.3e-64 248.4 173 70.5
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 1.4e-63 247.3 246 54.1
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 3.1e-63 246.1 177 66.7
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 8.0e-59 231.5 206 58.7
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 5.2e-58 228.8 268 44.4
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 6.8e-58 228.4 216 56.5
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 4.1e-55 219.2 221 48.9
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 1.2e-54 217.6 314 41.1
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 3.9e-53 212.6 274 44.5
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 3.3e-52 209.5 203 50.7
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 2.1e-51 206.8 141 72.3
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 8.0e-51 204.9 188 56.9
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 7.5e-49 198.4 199 49.7
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 1.1e-47 194.5 141 67.4
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 5.4e-47 192.2 177 52.0
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 4.6e-46 189.1 214 45.3
VMungo1080G0363 Vigna mungo HOM05D007250 ORTHO05D009162 2.3e-45 186.8 282 44.3
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 6.4e-40 168.7 210 49.5
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 5.4e-39 165.6 110 67.3
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 3.2e-31 139.8 211 38.9
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 4.1e-31 139.4 105 61.9
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 8.7e-29 131.7 146 45.9
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 1.4e-26 124.4 97 61.9
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 4.0e-26 122.9 166 40.4
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 3.8e-24 116.3 88 62.5
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 4.9e-24 115.9 208 39.9
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 9.3e-23 111.7 102 57.8
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 5.6e-20 102.4 84 59.5
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 7.1e-15 85.5 197 31.5
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 2.8e-11 73.6 78 47.4
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 1.4e-10 71.2 41 65.9
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 9.9e-09 65.1 54 51.9


User provided reference genes

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