Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 4.0e-81 304.7 149 100.0
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 2.9e-68 261.9 169 78.7
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 2.5e-67 258.8 169 77.5
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 1.8e-65 252.7 169 75.1
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 1.8e-65 252.7 169 75.7
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 1.8e-62 242.7 169 73.4
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 7.8e-61 237.3 169 73.4
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 7.8e-61 237.3 169 73.4
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 2.3e-60 235.7 170 71.2
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 5.7e-56 221.1 160 68.1
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 5.7e-56 221.1 169 67.5
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 1.7e-55 219.5 164 68.3
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.1e-54 216.9 159 67.3
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.1e-54 216.9 159 67.3
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 4.1e-54 214.9 154 68.2
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 7.0e-54 214.2 165 68.5
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 9.2e-54 213.8 160 68.8
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 1.2e-53 213.4 167 67.7
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 2.0e-53 212.6 118 84.7
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 2.7e-53 212.2 158 68.4
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 4.6e-53 211.5 169 61.5
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 4.6e-53 211.5 159 66.7
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.6e-53 211.5 159 66.7
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 4.6e-53 211.5 154 67.5
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 4.6e-53 211.5 155 68.4
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 6.0e-53 211.1 157 66.2
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 7.8e-53 210.7 169 65.7
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 1.0e-52 210.3 139 72.7
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 3.9e-52 208.4 167 62.3
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 5.0e-52 208.0 166 67.5
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 8.6e-52 207.2 155 66.5
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 1.1e-51 206.8 162 64.2
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 1.5e-51 206.5 153 69.9
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.5e-51 206.5 153 66.7
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 2.5e-51 205.7 154 66.9
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 4.3e-51 204.9 162 65.4
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 5.6e-51 204.5 172 64.0
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 1.2e-50 203.4 153 64.1
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 1.2e-50 203.4 162 64.2
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 1.2e-50 203.4 172 64.0
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 1.6e-50 203.0 160 63.1
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 1.6e-50 203.0 165 63.6
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.6e-50 203.0 153 66.0
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 2.1e-50 202.6 154 64.9
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 4.7e-50 201.4 159 61.6
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 6.2e-50 201.1 153 64.7
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 8.0e-50 200.7 157 65.6
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 1.1e-49 200.3 157 63.7
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 1.1e-49 200.3 156 64.7
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 1.4e-49 199.9 164 62.8
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 1.4e-49 199.9 164 62.8
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 1.4e-49 199.9 169 58.6
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 1.8e-49 199.5 157 64.3
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.8e-49 199.5 168 61.9
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.8e-49 199.5 168 61.9
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 2.3e-49 199.1 161 64.6
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 3.1e-49 198.7 152 63.8
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 5.2e-49 198.0 153 65.4
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 5.2e-49 198.0 153 64.1
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 8.9e-49 197.2 153 66.7
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 1.2e-48 196.8 159 64.8
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 1.2e-48 196.8 168 61.3
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 1.2e-48 196.8 153 64.1
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 1.5e-48 196.4 167 61.1
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 2.0e-48 196.1 159 63.5
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 2.0e-48 196.1 157 62.4
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 2.6e-48 195.7 159 63.5
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 3.4e-48 195.3 168 63.1
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 3.4e-48 195.3 209 52.6
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 4.4e-48 194.9 153 65.4
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 5.8e-48 194.5 155 63.9
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 7.5e-48 194.1 159 62.9
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 7.5e-48 194.1 172 59.9
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 9.8e-48 193.7 159 62.9
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 1.7e-47 193.0 154 63.6
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 1.7e-47 193.0 114 78.1
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 2.2e-47 192.6 113 78.8
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 6.4e-47 191.0 169 60.9
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 6.4e-47 191.0 159 62.3
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 8.3e-47 190.7 160 64.4
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 1.1e-46 190.3 162 59.9
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 1.4e-46 189.9 155 63.9
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 3.5e-45 185.3 187 52.9
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 6.0e-45 184.5 128 67.2
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 6.0e-45 184.5 119 72.3
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 7.8e-45 184.1 152 61.8
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 3.9e-44 181.8 185 55.7
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 1.1e-43 180.3 158 61.4
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 2.8e-42 175.6 170 55.9
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 1.1e-41 173.7 157 57.3
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 5.8e-40 167.9 133 64.7
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 1.1e-38 163.7 164 53.7
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 2.4e-38 162.5 94 79.8
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 3.5e-37 158.7 154 55.8
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 4.6e-37 158.3 91 79.1
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 6.0e-37 157.9 110 75.5
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 9.5e-35 150.6 151 51.7
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.0e-28 130.6 108 63.9
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 2.5e-27 125.9 139 55.4
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 6.9e-25 117.9 72 76.4
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 4.9e-23 111.7 148 39.2
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.6e-18 96.7 65 70.8
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 2.4e-17 92.8 79 55.7
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 2.4e-17 92.8 61 77.0
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 1.1e-11 73.9 53 66.0


User provided reference genes

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