Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G042700 Phaseolus vulgaris HOM05D008109 ORTHO05D009894 4.6e-83 311.2 161 100.0
VMungo1080G1374 Vigna mungo HOM05D008109 ORTHO05D009894 6.4e-61 237.7 169 81.1
Lalb_Chr25g0283751 Lupinus albus HOM05D008109 ORTHO05D009894 3.2e-44 182.2 167 67.1
Glyma.08G158700 Glycine max HOM05D008109 ORTHO05D009894 1.6e-43 179.9 197 62.9
Medtr2g062280 Medicago truncatula HOM05D008109 ORTHO05D009894 4.6e-43 178.3 164 68.3
TPR.G10815 Trifolium pratense HOM05D008109 ORTHO05D009894 6.7e-42 174.5 161 65.2
Glyma.15G267600 Glycine max HOM05D008109 ORTHO05D009894 1.4e-39 166.8 181 63.0
Lj3g0014063 Lotus japonicus HOM05D008109 ORTHO05D009894 2.2e-37 159.5 182 59.3
Dinv43946 Davidia involucrata HOM05D008109 ORTHO05D009894 2.3e-18 96.3 154 46.8
Ciclev10032944m.g Citrus clementina HOM05D008109 ORTHO05D009894 1.5e-17 93.6 160 44.4
Haze_03277 Corylus avellana HOM05D008109 ORTHO05D009894 2.2e-16 89.7 151 44.4
Cfa010699 Carpinus fangiana HOM05D008109 ORTHO05D009894 3.7e-16 89.0 151 43.0
Nn7g35907 Nelumbo nucifera HOM05D008109 ORTHO05D009894 3.7e-16 89.0 170 41.8
CiPaw.13G000700 Carya illinoinensis HOM05D008109 ORTHO05D009894 6.3e-16 88.2 159 40.9
Gorai.010G246800 Gossypium raimondii HOM05D008109 ORTHO05D009894 6.3e-16 88.2 158 42.4
Gohir.A06G202200 Gossypium hirsutum HOM05D008109 ORTHO05D009894 1.1e-15 87.4 156 44.9
Gohir.D06G219700 Gossypium hirsutum HOM05D008109 ORTHO05D009894 1.1e-15 87.4 155 43.9
Duzib235G0400 Durio zibethinus HOM05D008109 ORTHO05D009894 2.4e-15 86.3 155 43.2
Prupe.2G001600 Prunus persica HOM05D008109 ORTHO05D009894 2.4e-15 86.3 150 43.3
Potri.009G024700 Populus trichocarpa HOM05D008109 ORTHO05D009894 2.0e-14 83.2 177 37.9
Atru.chr11.2715 Acer truncatum HOM05D008109 ORTHO05D009894 2.6e-14 82.8 177 41.8
Sabra16G0138900 Salix brachista HOM05D008109 ORTHO05D009894 2.6e-14 82.8 173 39.9
vmacro22469 Vaccinium macrocarpon HOM05D008109 ORTHO05D009894 5.9e-14 81.6 154 41.6
QL04p002011 Quercus lobata HOM05D008109 ORTHO05D009894 7.7e-14 81.3 167 41.9
CsaV3_7G031540 Cucumis sativus L. HOM05D008109 ORTHO05D009894 1.3e-13 80.5 160 41.2
Potri.001G232200 Populus trichocarpa HOM05D008109 ORTHO05D009894 1.7e-13 80.1 164 40.9
Duzib192G0509 Durio zibethinus HOM05D008109 ORTHO05D009894 2.2e-13 79.7 142 45.8
Thecc.06G002700 Theobroma cacao HOM05D008109 ORTHO05D009894 2.2e-13 79.7 158 41.1
Nn2g15812 Nelumbo nucifera HOM05D008109 ORTHO05D009894 8.5e-13 77.8 95 48.4
MELO3C023500.2 Cucumis melo HOM05D008109 ORTHO05D009894 1.4e-12 77.0 159 39.0
Gohir.A05G110700 Gossypium hirsutum HOM05D008109 ORTHO05D009894 1.4e-12 77.0 151 38.4
ClCG09G003640 Citrullus lanatus HOM05D008109 ORTHO05D009894 3.2e-12 75.9 160 40.6
TWI09G0246 Tripterygium wilfordii HOM05D008109 ORTHO05D009894 9.4e-12 74.3 164 38.4
Psat1g129400 Pisum sativum HOM05D008109 ORTHO05D009894 1.6e-11 73.6 168 41.1
THA.LOC104815879 Tarenaya hassleriana HOM05D011216 ORTHO05D009894 3.6e-11 72.4 159 37.1
Hma1.2p1_0541F.1_g174770 Hydrangea macrophylla HOM05D008109 ORTHO05D009894 4.7e-11 72.0 161 39.8
Aqoxy1G00435 Aquilegia oxysepala HOM05D008109 ORTHO05D009894 8.0e-11 71.2 165 37.0
TAR623G1474 Trochodendron aralioides HOM05D008109 ORTHO05D009894 1.8e-10 70.1 73 57.5
Gohir.D05G111100 Gossypium hirsutum HOM05D008109 ORTHO05D009894 3.9e-10 68.9 151 37.7
Gorai.009G115400 Gossypium raimondii HOM05D008109 ORTHO05D009894 3.9e-10 68.9 151 37.7
Cc02_g26790 Coffea canephora HOM05D008109 ORTHO05D009894 6.7e-10 68.2 167 35.3
PGR031G1804 Punica granatum HOM05D008109 ORTHO05D009894 6.7e-10 68.2 160 40.0
Sed0022406 Sechium edule HOM05D008109 ORTHO05D009894 6.7e-10 68.2 153 39.2
Manes.10G153100 Manihot esculenta HOM05D011216 ORTHO05D009894 1.1e-09 67.4 168 36.3
Cc02_g26780 Coffea canephora HOM05D008109 ORTHO05D009894 2.0e-09 66.6 159 35.2
Sed0011083 Sechium edule HOM05D008109 ORTHO05D009894 2.0e-09 66.6 145 37.2
PGSC0003DMG400015658 Solanum tuberosum HOM05D008109 ORTHO05D009894 2.0e-09 66.6 140 37.9
AUR62012433 Chenopodium quinoa HOM05D008109 ORTHO05D009894 9.7e-09 64.3 153 35.9
Dinv43505 Davidia involucrata HOM05D008109 ORTHO05D009894 1.3e-08 63.9 126 38.9
Nitab4.5_0004375g0040 Nicotiana tabacum HOM05D008109 ORTHO05D009894 2.8e-08 62.8 148 33.8
Peaxi162Scf01343g00014 Petunia axillaris HOM05D008109 ORTHO05D009894 4.8e-08 62.0 135 37.8
AUR62031557 Chenopodium quinoa HOM05D008109 ORTHO05D009894 1.1e-07 60.8 141 36.9
C04p17830 Brassica napus HOM05D011216 ORTHO05D009894 1.4e-07 60.5 145 35.9
BolC4t23331H Brassica oleracea HOM05D011216 ORTHO05D009894 1.4e-07 60.5 145 35.9
A05p13660 Brassica napus HOM05D011216 ORTHO05D009894 3.1e-07 59.3 146 36.3
BraA05t20304Z Brassica rapa HOM05D011216 ORTHO05D009894 3.1e-07 59.3 146 36.3
Eucgr.I02808 Eucalyptus grandis HOM05D008109 ORTHO05D009894 4.1e-07 58.9 156 34.0
Lsat_1_v5_gn_1_89920 Lactuca sativa HOM05D008109 ORTHO05D009894 5.3e-07 58.5 151 37.7
Nitab4.5_0000266g0110 Nicotiana tabacum HOM05D008109 ORTHO05D009894 9.1e-07 57.8 128 35.9
Solyc06g051220.1 Solanum lycopersicum HOM05D008109 ORTHO05D009894 1.2e-06 57.4 141 34.8
CAN.G103.18 Capsicum annuum HOM05D008109 ORTHO05D009894 1.6e-06 57.0 133 39.1
COL.COLO4_26840 Corchorus olitorius HOM05D004088 ORTHO05D004736 2.6e-06 56.2 112 39.3
Sp4g14290 Schrenkiella parvula HOM05D011216 ORTHO05D009894 2.6e-06 56.2 140 35.0
AT2G31930 Arabidopsis thaliana HOM05D011216 ORTHO05D009894 4.5e-06 55.5 163 35.6


User provided reference genes

Program Settings