Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 6.6e-204 713.8 346 100.0
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 6.6e-172 607.4 324 90.4
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 5.2e-169 597.8 345 84.9
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 1.4e-161 573.2 346 79.5
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 1.1e-155 553.5 344 78.2
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 1.2e-152 543.5 344 75.9
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 1.0e-148 530.4 344 75.6
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 6.9e-145 517.7 324 76.9
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 4.9e-143 511.5 323 75.5
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 7.2e-134 481.1 345 67.5
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 4.6e-133 478.4 359 65.7
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 5.1e-132 474.9 342 67.5
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.7e-130 468.8 342 64.9
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 9.1e-129 464.2 346 64.7
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 1.2e-128 463.8 360 62.5
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 4.5e-128 461.8 345 64.9
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 1.7e-127 459.9 347 64.6
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 1.7e-127 459.9 347 64.0
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 1.1e-126 457.2 352 63.6
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 1.4e-126 456.8 347 64.6
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 1.9e-126 456.4 347 64.6
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 3.2e-126 455.7 347 64.6
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 1.6e-125 453.4 347 64.6
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 2.7e-125 452.6 348 61.2
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 6.1e-125 451.4 347 64.0
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 7.9e-125 451.1 346 64.2
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 1.0e-124 450.7 348 64.1
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 8.8e-124 447.6 338 64.2
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 8.8e-124 447.6 338 64.2
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 1.1e-123 447.2 347 63.7
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 2.6e-123 446.0 348 62.1
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 1.7e-122 443.4 344 63.1
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 1.7e-122 443.4 347 64.0
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 8.2e-122 441.0 347 63.1
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 3.1e-121 439.1 355 59.7
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.1e-121 439.1 344 62.5
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 4.1e-121 438.7 354 59.9
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 9.1e-121 437.6 347 62.5
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 1.5e-120 436.8 344 61.9
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 2.6e-120 436.0 348 61.5
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 7.7e-120 434.5 360 60.0
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 1.4e-118 430.3 347 62.8
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 9.4e-118 427.6 347 60.8
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 1.2e-117 427.2 343 61.8
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 1.6e-117 426.8 350 57.7
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 4.7e-117 425.2 353 58.9
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 6.1e-117 424.9 348 60.3
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 1.0e-116 424.1 345 59.7
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.8e-116 423.3 353 58.6
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 3.0e-116 422.5 353 58.6
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 8.8e-116 421.0 348 58.9
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 1.5e-115 420.2 348 59.8
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 2.0e-115 419.9 349 58.7
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 9.7e-115 417.5 349 60.5
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 9.7e-115 417.5 316 63.0
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 5.3e-113 411.8 347 58.8
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 4.5e-112 408.7 347 59.7
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 2.9e-111 406.0 314 66.2
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.5e-110 403.7 337 59.6
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 1.5e-110 403.7 347 58.8
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 1.9e-110 403.3 352 56.2
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 5.5e-110 401.7 348 57.5
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 1.6e-109 400.2 350 55.7
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 2.1e-109 399.8 349 54.4
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 6.1e-109 398.3 344 58.4
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 3.0e-108 396.0 364 51.6
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 3.3e-107 392.5 275 68.0
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 1.3e-106 390.6 331 57.1
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 2.2e-106 389.8 346 54.0
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 8.2e-106 387.9 347 52.4
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 1.1e-105 387.5 345 53.3
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 1.1e-105 387.5 345 53.3
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 2.4e-105 386.3 343 57.4
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 5.3e-105 385.2 347 52.7
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 1.2e-104 384.0 339 58.7
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 1.6e-104 383.6 328 57.9
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 3.5e-104 382.5 324 59.6
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 7.7e-104 381.3 347 53.3
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 1.0e-103 380.9 379 50.1
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 1.3e-103 380.6 347 53.3
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 9.4e-102 374.4 369 49.9
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 1.4e-100 370.5 345 55.7
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 1.4e-100 370.5 344 54.7
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 6.8e-100 368.2 351 54.1
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 5.4e-97 358.6 271 65.3
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 2.9e-95 352.8 268 64.9
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 1.9e-94 350.1 332 53.9
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 3.3e-94 349.4 344 52.0
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 7.2e-94 348.2 252 67.9
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 9.5e-94 347.8 335 53.4
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 3.7e-90 335.9 313 56.5
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.4e-89 334.0 252 64.3
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 7.3e-86 321.6 343 49.6
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 1.8e-84 317.0 344 48.8
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 2.2e-82 310.1 214 73.4
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 2.9e-82 309.7 345 49.9
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 8.3e-82 308.1 241 61.0
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 3.2e-81 306.2 351 47.0
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 6.0e-80 302.0 261 57.1
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 2.1e-77 293.5 305 51.5
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 1.4e-76 290.8 242 64.0
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 1.8e-76 290.4 265 57.7
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 5.6e-70 268.9 238 53.4
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 2.8e-69 266.5 194 66.5
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 7.8e-64 248.4 355 38.6
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.8e-60 237.3 197 53.8
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 3.2e-57 226.5 313 43.1
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 3.5e-40 169.9 130 58.5
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 3.7e-37 159.8 126 57.9
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 4.8e-37 159.5 315 35.9
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 5.5e-33 146.0 100 69.0
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 1.5e-30 137.9 185 42.7
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 1.0e-26 125.2 146 45.9
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 2.0e-19 100.9 69 69.6
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 6.1e-16 89.4 73 56.2
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 6.9e-12 75.9 83 54.2


User provided reference genes

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