Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 3.2e-74 281.6 132 100.0
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 9.9e-68 260.0 132 92.4
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 1.1e-63 246.5 129 88.4
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 1.6e-62 242.7 129 86.0
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 6.2e-62 240.7 129 86.8
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 8.1e-62 240.4 129 85.3
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 1.2e-60 236.5 129 83.7
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 5.8e-60 234.2 129 82.2
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 5.8e-60 234.2 129 82.2
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 5.8e-60 234.2 129 81.4
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 9.9e-60 233.4 129 79.1
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 4.9e-59 231.1 129 79.8
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 6.4e-59 230.7 130 79.2
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 6.4e-59 230.7 130 78.5
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 6.4e-59 230.7 129 79.1
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 1.1e-58 229.9 129 81.4
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 2.4e-58 228.8 129 79.8
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 4.2e-58 228.0 129 78.3
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 9.3e-58 226.9 129 78.3
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 1.2e-57 226.5 129 77.5
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.2e-57 226.5 129 77.5
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.2e-57 226.5 129 77.5
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 1.6e-57 226.1 129 78.3
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 2.1e-57 225.7 129 79.8
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 2.7e-57 225.3 129 76.7
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 4.6e-57 224.6 131 77.1
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 7.9e-57 223.8 129 78.3
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 1.0e-56 223.4 131 77.1
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 1.3e-56 223.0 129 76.0
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.8e-56 222.6 129 77.5
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 1.8e-56 222.6 129 78.3
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 2.3e-56 222.2 129 76.7
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 2.3e-56 222.2 129 76.0
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 3.0e-56 221.9 129 76.7
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 3.0e-56 221.9 129 76.0
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 5.1e-56 221.1 129 77.5
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 1.1e-55 219.9 129 75.2
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 1.1e-55 219.9 131 74.8
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 1.1e-55 219.9 129 74.4
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 1.9e-55 219.2 129 72.9
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 3.3e-55 218.4 131 73.3
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 5.6e-55 217.6 132 74.2
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 9.6e-55 216.9 129 74.4
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 1.3e-54 216.5 131 74.0
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 1.6e-54 216.1 129 76.7
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 2.8e-54 215.3 129 76.0
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 2.8e-54 215.3 129 75.2
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 6.2e-54 214.2 129 73.6
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 6.2e-54 214.2 129 72.1
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 8.1e-54 213.8 131 71.8
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 1.8e-53 212.6 129 75.2
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 1.8e-53 212.6 129 74.4
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 2.4e-53 212.2 129 72.9
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 2.4e-53 212.2 129 72.9
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 3.1e-53 211.8 131 73.3
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 4.0e-53 211.5 129 72.9
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 5.3e-53 211.1 172 60.5
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 1.2e-52 209.9 129 73.6
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 2.0e-52 209.1 129 72.1
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 2.6e-52 208.8 130 73.1
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 5.8e-52 207.6 129 71.3
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 9.9e-52 206.8 131 71.0
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 9.9e-52 206.8 131 71.0
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 1.3e-51 206.5 127 71.7
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 1.3e-51 206.5 129 70.5
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 2.9e-51 205.3 131 67.9
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 4.9e-51 204.5 129 72.9
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 6.4e-51 204.1 131 69.5
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 8.4e-51 203.8 129 70.5
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 8.4e-51 203.8 129 68.2
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.1e-50 203.4 129 69.0
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 1.4e-50 203.0 129 71.3
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 2.4e-50 202.2 129 69.8
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 3.2e-50 201.8 131 68.7
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 3.2e-50 201.8 129 69.8
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 4.2e-50 201.4 131 72.5
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 5.5e-50 201.1 133 70.7
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 1.2e-49 199.9 131 67.2
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 5.1e-48 194.5 129 67.4
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 9.6e-47 190.3 129 64.3
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 9.6e-47 190.3 129 65.9
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 8.2e-46 187.2 129 63.6
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 1.1e-45 186.8 223 45.7
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 2.4e-45 185.7 127 64.6
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 3.4e-44 181.8 129 61.2
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 2.9e-43 178.7 107 76.6
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 8.4e-43 177.2 130 60.8
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 1.1e-42 176.8 129 64.3
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 2.5e-42 175.6 130 59.2
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 2.5e-42 175.6 130 59.2
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 2.5e-42 175.6 130 59.2
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 4.2e-42 174.9 130 58.5
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 4.2e-42 174.9 130 58.5
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 9.3e-42 173.7 130 60.0
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 3.5e-41 171.8 130 59.2
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 6.0e-41 171.0 130 59.2
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 1.3e-40 169.9 130 58.5
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 6.7e-40 167.5 130 56.9
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 1.5e-39 166.4 130 56.9
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 2.5e-39 165.6 129 55.0
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 1.3e-38 163.3 152 55.3
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 2.8e-38 162.2 130 53.1
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 2.4e-37 159.1 131 55.0
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 2.4e-37 159.1 130 57.7
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 2.2e-35 152.5 135 51.1
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 1.4e-34 149.8 130 54.6
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 2.5e-34 149.1 133 51.9
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 5.5e-34 147.9 129 51.2
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 1.2e-33 146.7 81 77.8
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 1.6e-33 146.4 81 79.0
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 1.3e-32 143.3 129 51.2
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 7.4e-31 137.5 102 60.8
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 2.4e-29 132.5 79 73.4
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 2.4e-29 132.5 130 46.2
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 4.2e-26 121.7 74 73.0
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 2.4e-21 105.9 63 69.8
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 1.2e-20 103.6 105 45.7
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 2.0e-20 102.8 72 68.1
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 6.1e-17 91.3 124 38.7
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 3.0e-16 89.0 56 60.7
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 1.2e-12 77.0 48 70.8
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 4.5e-12 75.1 48 66.7
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 5.5e-10 68.2 54 55.6
Cre07.g315100 Chlamydomonas reinhardtii HOM05D006442 ORTHO05D007980 1.2e-09 67.0 75 42.7
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 2.7e-09 65.9 50 58.0
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 2.3e-08 62.8 43 62.8


User provided reference genes

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