Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G034300 Phaseolus vulgaris HOM05D007065 ORTHO05D008960 1.5e-62 243.0 161 100.0
Glyma.11G157140 Glycine max HOM05D007065 ORTHO05D008960 1.1e-52 210.3 161 89.4
Psat5g211000 Pisum sativum HOM05D007065 ORTHO05D008960 2.2e-45 186.0 121 77.7
Lalb_Chr04g0263741 Lupinus albus HOM05D007065 ORTHO05D008960 6.0e-43 177.9 165 62.4
Lj3g0026300 Lotus japonicus HOM05D007065 ORTHO05D008960 2.3e-42 176.0 168 69.0
Medtr3g436080 Medicago truncatula HOM05D007065 ORTHO05D008960 3.0e-42 175.6 161 71.4
VMungo1080G1068 Vigna mungo HOM05D007065 ORTHO05D008960 1.9e-41 172.9 104 89.4
QL04p012215 Quercus lobata HOM05D007065 ORTHO05D008960 9.0e-39 164.1 159 68.6
Ca_14187_v3 Cicer arietinum L. HOM05D007065 ORTHO05D008960 2.9e-37 159.1 168 63.7
arahy.Tifrunner.gnm1.ann1.D1ESAM Arachis hypogaea HOM05D007065 ORTHO05D008960 2.1e-35 152.9 157 60.5
TPR.G15470 Trifolium pratense HOM05D007065 ORTHO05D008960 3.9e-34 148.7 103 74.8
arahy.Tifrunner.gnm1.ann1.ZUZF0V Arachis hypogaea HOM05D007065 ORTHO05D008960 8.7e-34 147.5 158 56.3
CiPaw.13G009300 Carya illinoinensis HOM05D007065 ORTHO05D008960 1.1e-33 147.1 165 55.2
MBI13_g15309_MAGBIO Magnolia biondii HOM05D007065 ORTHO05D008960 9.7e-33 144.1 115 67.0
Dinv05022 Davidia involucrata HOM05D007065 ORTHO05D008960 1.3e-32 143.7 123 61.0
Aqoxy1G00221 Aquilegia oxysepala HOM05D007065 ORTHO05D008960 1.6e-32 143.3 162 60.5
MD07G1026200 Malus domestica HOM05D007065 ORTHO05D008960 2.2e-32 142.9 122 61.5
Nn2g15140 Nelumbo nucifera HOM05D007065 ORTHO05D008960 2.4e-31 139.4 159 52.8
GSVIVG01001464001 Vitis vinifera HOM05D007065 ORTHO05D008960 2.4e-31 139.4 111 64.9
FvH4_7g02000 Fragaria vesca HOM05D007065 ORTHO05D008960 2.0e-30 136.3 160 52.5
Sc10g0004180 Simmondsia chinensis HOM05D007065 ORTHO05D008960 4.5e-30 135.2 118 61.9
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 5.9e-30 134.8 160 54.4
MD02G1298000 Malus domestica HOM05D007065 ORTHO05D008960 5.9e-30 134.8 114 61.4
MSTRG.20552 Avicennia marina HOM05D007065 ORTHO05D008960 1.7e-29 133.3 117 61.5
FAN01G0916 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.7e-29 133.3 160 51.9
Actinidia19434 Actinidia chinensis HOM05D007065 ORTHO05D008960 3.8e-29 132.1 105 63.8
MSTRG.17000 Avicennia marina HOM05D007065 ORTHO05D008960 3.8e-29 132.1 99 66.7
PSO339G2565 Papaver somniferum HOM05D007065 ORTHO05D008960 8.5e-29 131.0 160 50.0
Eucgr.G03272 Eucalyptus grandis HOM05D007065 ORTHO05D008960 3.2e-28 129.0 115 61.7
MELO3C005114.2 Cucumis melo HOM05D007065 ORTHO05D008960 5.5e-28 128.3 112 66.1
CsaV3_5G024860 Cucumis sativus L. HOM05D007065 ORTHO05D008960 5.5e-28 128.3 111 64.0
PSO384G3763 Papaver somniferum HOM05D007065 ORTHO05D008960 7.2e-28 127.9 160 49.4
Oeu027356.1 Olea europaea HOM05D007065 ORTHO05D008960 9.3e-28 127.5 123 58.5
RcHm_v2.0_Chr1g0318991 Rosa chinensis HOM05D007065 ORTHO05D008960 9.3e-28 127.5 119 60.5
AUR62030541 Chenopodium quinoa HOM05D007065 ORTHO05D008960 2.7e-27 125.9 116 58.6
Hund13309 Selenicereus undatus HOM05D007065 ORTHO05D008960 3.6e-27 125.6 97 63.9
ClCG01G007790 Citrullus lanatus HOM05D007065 ORTHO05D008960 4.6e-27 125.2 109 62.4
Cc02_g30050 Coffea canephora HOM05D007065 ORTHO05D008960 6.1e-27 124.8 120 59.2
THA.LOC104819111 Tarenaya hassleriana HOM05D007065 ORTHO05D008960 7.9e-27 124.4 122 58.2
PGR031G2384 Punica granatum HOM05D007065 ORTHO05D008960 1.3e-26 123.6 115 56.5
AUR62037250 Chenopodium quinoa HOM05D007065 ORTHO05D008960 1.8e-26 123.2 114 56.1
Lsat_1_v5_gn_1_99921 Lactuca sativa HOM05D007065 ORTHO05D008960 2.3e-26 122.9 113 55.8
TAR636G1654 Trochodendron aralioides HOM05D007065 ORTHO05D008960 2.3e-26 122.9 106 64.2
Nitab4.5_0016351g0020 Nicotiana tabacum HOM05D007065 ORTHO05D008960 3.0e-26 122.5 103 64.1
Sopen01g035020 Solanum pennellii HOM05D007065 ORTHO05D008960 5.1e-26 121.7 118 55.9
Solyc01g088140.3 Solanum lycopersicum HOM05D007065 ORTHO05D008960 6.7e-26 121.3 118 55.9
COL.COLO4_19334 Corchorus olitorius HOM05D002616 ORTHO05D003192 1.1e-25 120.6 123 56.9
Peaxi162Scf01115g00011 Petunia axillaris HOM05D007065 ORTHO05D008960 1.9e-25 119.8 122 55.7
ATR1134G106 Amborella trichopoda HOM05D007065 ORTHO05D008960 3.3e-25 119.0 164 50.6
EL10Ac2g02888 Beta vulgaris HOM05D007065 ORTHO05D008960 3.3e-25 119.0 166 45.8
Peaxi162Scf01115g00110 Petunia axillaris HOM05D007065 ORTHO05D008960 4.3e-25 118.6 118 56.8
PGSC0003DMG400006766 Solanum tuberosum HOM05D007065 ORTHO05D008960 4.3e-25 118.6 118 55.1
HanXRQChr01g0020971 Helianthus annuus HOM05D007065 ORTHO05D008960 5.7e-25 118.2 159 45.3
Nitab4.5_0000316g0330 Nicotiana tabacum HOM05D007065 ORTHO05D008960 7.4e-25 117.9 96 64.6
Aa31LG11G7640 Aethionema arabicum HOM05D007065 ORTHO05D008960 9.7e-25 117.5 102 58.8
Thecc.10G002700 Theobroma cacao HOM05D007065 ORTHO05D008960 9.7e-25 117.5 169 60.9
Carub.0006s1163 Capsella rubella HOM05D007065 ORTHO05D008960 1.3e-24 117.1 100 63.0
Actinidia06280 Actinidia chinensis HOM05D007065 ORTHO05D008960 2.2e-24 116.3 115 57.4
Manes.04G064100 Manihot esculenta HOM05D007065 ORTHO05D008960 2.8e-24 115.9 107 57.0
SGA_v2.0_scaffold4G02459 Striga asiatica HOM05D007065 ORTHO05D008960 6.3e-24 114.8 123 52.0
Cfa010837 Carpinus fangiana HOM05D007065 ORTHO05D008960 8.2e-24 114.4 149 49.7
AL6G24090 Arabidopsis lyrata HOM05D007065 ORTHO05D008960 1.4e-23 113.6 100 61.0
Duzib128G1478 Durio zibethinus HOM05D007065 ORTHO05D008960 1.4e-23 113.6 167 47.9
DCAR_022363 Daucus carota HOM05D007065 ORTHO05D008960 2.4e-23 112.8 161 49.7
Dinv32064 Davidia involucrata HOM05D007065 ORTHO05D008960 2.4e-23 112.8 99 62.6
ECA248G1453 Erigeron canadensis HOM05D007065 ORTHO05D008960 2.4e-23 112.8 119 52.9
AT5G13470 Arabidopsis thaliana HOM05D007065 ORTHO05D008960 4.1e-23 112.1 100 61.0
Rhsim07G0061200 Rhododendron simsii HOM05D007065 ORTHO05D008960 4.1e-23 112.1 133 50.4
Potri.003G203900 Populus trichocarpa HOM05D007065 ORTHO05D008960 6.9e-23 111.3 118 55.9
Oeu049459.1 Olea europaea HOM05D007065 ORTHO05D008960 2.6e-22 109.4 105 61.0
Sed0022285 Sechium edule HOM05D007065 ORTHO05D008960 2.6e-22 109.4 115 56.5
Cpa.g.sc197.20 Carica papaya HOM05D007065 ORTHO05D008960 5.9e-22 108.2 161 46.0
unitig_22.g5430 Utricularia gibba HOM05D007065 ORTHO05D008960 5.9e-22 108.2 116 52.6
Potri.001G020700 Populus trichocarpa HOM05D007065 ORTHO05D008960 1.0e-21 107.5 104 58.7
Sp6g30550 Schrenkiella parvula HOM05D007065 ORTHO05D008960 1.0e-21 107.5 111 55.0
BolC9t59205H Brassica oleracea HOM05D007065 ORTHO05D008960 1.3e-21 107.1 127 52.0
C09p63610 Brassica napus HOM05D007065 ORTHO05D008960 2.2e-21 106.3 117 54.7
BraA10t44543Z Brassica rapa HOM05D007065 ORTHO05D008960 2.2e-21 106.3 122 50.8
Duzib114G0680 Durio zibethinus HOM05D007065 ORTHO05D008960 2.2e-21 106.3 170 45.3
Migut.B01254 Erythranthe guttata HOM05D007065 ORTHO05D008960 2.2e-21 106.3 104 56.7
A10p24790 Brassica napus HOM05D007065 ORTHO05D008960 2.9e-21 105.9 122 50.8
Ah.12g065220 Amaranthus hybridus HOM05D007065 ORTHO05D008960 3.8e-21 105.5 158 45.6
FAN03G0341 Fragaria x ananassa HOM05D007065 ORTHO05D008960 8.5e-21 104.4 145 47.6
Sabra01G0015300 Salix brachista HOM05D007065 ORTHO05D008960 8.5e-21 104.4 101 59.4
Lj9P644T43 Lonicera japonica HOM05D007065 ORTHO05D008960 1.1e-20 104.0 107 64.5
A02p01960 Brassica napus HOM05D007065 ORTHO05D008960 1.4e-20 103.6 121 53.7
FAN28G1096 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.9e-20 103.2 79 68.4
SalBow5G0133 Salvia bowleyana HOM05D007065 ORTHO05D008960 4.2e-20 102.1 113 55.8
BcaNung01886 Brassica carinata HOM05D007065 ORTHO05D002715 5.5e-20 101.7 126 50.8
SalBow5G3075 Salvia bowleyana HOM05D007065 ORTHO05D008960 7.2e-20 101.3 85 64.7
BcaNung01150 Brassica carinata HOM05D007065 ORTHO05D008960 1.2e-19 100.5 122 50.8
C02p06180 Brassica napus HOM05D007065 ORTHO05D008960 1.6e-19 100.1 122 50.8
BolC2t06559H Brassica oleracea HOM05D007065 ORTHO05D008960 1.6e-19 100.1 122 50.8
BraA02t05169Z Brassica rapa HOM05D007065 ORTHO05D008960 1.6e-19 100.1 121 52.9
CDE04G3117 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 2.1e-19 99.8 104 52.9
vmacro13712 Vaccinium macrocarpon HOM05D007065 ORTHO05D008960 2.1e-19 99.8 102 54.9
Gohir.D13G013700 Gossypium hirsutum HOM05D007065 ORTHO05D008960 6.1e-19 98.2 99 57.6
CDE07G0125 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 1.8e-18 96.7 119 47.1
Hma1.2p1_0579F.1_g182650 Hydrangea macrophylla HOM05D007065 ORTHO05D008960 3.0e-18 95.9 145 50.3
Thecc.03G067800 Theobroma cacao HOM05D007065 ORTHO05D008960 1.5e-17 93.6 96 54.2
Haze_03101 Corylus avellana HOM05D007065 ORTHO05D008960 2.8e-16 89.4 69 69.6
Thhalv10014938m.g Eutrema salsugineum HOM05D007065 ORTHO05D008960 2.8e-16 89.4 113 51.3
TWI09G1481 Tripterygium wilfordii HOM05D007065 ORTHO05D008960 2.8e-16 89.4 114 49.1
HPP92_001654 Vanilla planifolia HOM05D007065 ORTHO05D008960 1.4e-15 87.0 119 42.0
CANSAT80G2361 Cannabis sativa HOM05D007065 ORTHO05D008960 4.1e-15 85.5 59 71.2
CSS0014876 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D000473 1.7e-13 80.1 80 58.8
AagrBONN_evm.TU.Sc2ySwM_228.825 Anthoceros agrestis HOM05D007065 ORTHO05D008960 1.6e-11 73.6 103 47.6
Gohir.A13G012500 Gossypium hirsutum HOM05D007065 ORTHO05D008960 2.7e-11 72.8 109 47.7
Gorai.013G014700 Gossypium raimondii HOM05D007065 ORTHO05D008960 3.6e-11 72.4 109 47.7
Mapoly0014s0118 Marchantia polymorpha HOM05D007065 ORTHO05D008960 6.1e-11 71.6 121 38.8
Os01g0939400 Oryza sativa ssp. japonica HOM05D007065 ORTHO05D008960 5.2e-10 68.6 90 45.6
Zm00001eb141670 Zea mays HOM05D007065 ORTHO05D008960 5.2e-10 68.6 87 48.3
CBR_g4751 Chara braunii HOM05D007065 ORTHO05D008960 8.2e-08 61.2 65 50.8


User provided reference genes

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