Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G033400 Phaseolus vulgaris HOM05D007435 ORTHO05D009338 3.4e-63 245.0 138 100.0
Glyma.11G149600 Glycine max HOM05D007435 ORTHO05D009338 4.2e-37 158.3 145 66.9
VMungo1080G0635 Vigna mungo HOM05D007435 ORTHO05D009338 1.0e-35 153.7 99 81.8
Glyma.04G142000 Glycine max HOM05D007435 ORTHO05D009338 9.5e-21 104.0 139 54.7
Medtr3g023160 Medicago truncatula HOM05D007435 ORTHO05D009338 4.7e-20 101.7 140 50.0
Psat5g213320 Pisum sativum HOM05D007435 ORTHO05D009338 4.0e-19 98.6 140 47.1
Lj3g0014273 Lotus japonicus HOM05D007435 ORTHO05D009338 2.7e-15 85.9 144 43.8
Lalb_Chr25g0282731 Lupinus albus HOM05D007435 ORTHO05D009338 2.7e-15 85.9 135 43.7
TAR065G0004 Trochodendron aralioides HOM05D007435 ORTHO05D009338 8.6e-14 80.9 123 44.7
arahy.Tifrunner.gnm1.ann1.4Y0UDN Arachis hypogaea HOM05D007435 ORTHO05D009338 1.9e-13 79.7 148 44.6
Manes.11G002100 Manihot esculenta HOM05D007435 ORTHO05D009338 1.9e-13 79.7 129 44.2
Ca_27018_v3 Cicer arietinum L. HOM05D007435 ORTHO05D009338 3.3e-13 79.0 91 53.8
arahy.Tifrunner.gnm1.ann1.KRJM02 Arachis hypogaea HOM05D007435 ORTHO05D009338 2.8e-12 75.9 152 42.8
ClCG01G007560 Citrullus lanatus HOM05D007435 ORTHO05D009338 2.8e-12 75.9 129 40.3
Cpa.g.sc197.17 Carica papaya HOM05D007435 ORTHO05D009338 3.6e-12 75.5 116 47.4
AUR62037244 Chenopodium quinoa HOM05D007435 ORTHO05D009338 3.6e-12 75.5 101 47.5
Prupe.2G027100 Prunus persica HOM05D007435 ORTHO05D009338 3.6e-12 75.5 111 42.3
MELO3C005141.2 Cucumis melo HOM05D007435 ORTHO05D009338 4.7e-12 75.1 129 40.3
TAR369G0027 Trochodendron aralioides HOM05D007435 ORTHO05D009338 4.7e-12 75.1 121 43.0
Actinidia21528 Actinidia chinensis HOM05D007435 ORTHO05D009338 1.1e-11 73.9 100 45.0
Nn7g36439 Nelumbo nucifera HOM05D007435 ORTHO05D009338 1.1e-11 73.9 124 41.1
Actinidia02252 Actinidia chinensis HOM05D007435 ORTHO05D009338 1.8e-11 73.2 111 43.2
FvH4_7g02100 Fragaria vesca HOM05D007435 ORTHO05D009338 2.3e-11 72.8 134 37.3
RcHm_v2.0_Chr1g0319401 Rosa chinensis HOM05D007435 ORTHO05D009338 3.1e-11 72.4 131 37.4
Thecc.10G004500 Theobroma cacao HOM05D007435 ORTHO05D009338 4.0e-11 72.0 102 45.1
AUR62026808 Chenopodium quinoa HOM05D007435 ORTHO05D009338 5.2e-11 71.6 101 45.5
QL04p013057 Quercus lobata HOM05D007435 ORTHO05D009338 5.2e-11 71.6 90 47.8
Sed0015818 Sechium edule HOM05D007435 ORTHO05D009338 5.2e-11 71.6 146 37.7
CiPaw.13G009600 Carya illinoinensis HOM05D007435 ORTHO05D009338 6.8e-11 71.2 137 40.9
MD07G1027000 Malus domestica HOM05D007435 ORTHO05D009338 6.8e-11 71.2 129 42.6
FAN03G1772 Fragaria x ananassa HOM05D007435 ORTHO05D009338 8.9e-11 70.9 133 36.8
CARHR239440 Cardamine hirsuta HOM05D007435 ORTHO05D009338 1.2e-10 70.5 126 38.9
TWI63G0886 Tripterygium wilfordii HOM05D007435 ORTHO05D009338 1.5e-10 70.1 120 41.7
Dinv32059 Davidia involucrata HOM05D007435 ORTHO05D009338 2.0e-10 69.7 100 47.0
Carub.0007s0901 Capsella rubella HOM05D007435 ORTHO05D009338 2.6e-10 69.3 101 42.6
SalBow6G1324 Salvia bowleyana HOM05D007435 ORTHO05D009338 2.6e-10 69.3 109 41.3
Cfa010840 Carpinus fangiana HOM05D007435 ORTHO05D009338 3.4e-10 68.9 133 41.4
CsaV3_5G024570 Cucumis sativus L. HOM05D007435 ORTHO05D009338 4.4e-10 68.6 129 38.8
Dinv03572 Davidia involucrata HOM05D007435 ORTHO05D009338 4.4e-10 68.6 99 44.4
Dinv05039 Davidia involucrata HOM05D007435 ORTHO05D009338 4.4e-10 68.6 99 44.4
Eucgr.G03266 Eucalyptus grandis HOM05D007435 ORTHO05D009338 4.4e-10 68.6 101 44.6
Ah.10g030920 Amaranthus hybridus HOM05D007435 ORTHO05D009338 7.5e-10 67.8 149 40.3
AT4G31560 Arabidopsis thaliana HOM05D007435 ORTHO05D009338 7.5e-10 67.8 101 42.6
Haze_03106 Corylus avellana HOM05D007435 ORTHO05D009338 9.8e-10 67.4 133 40.6
THA.LOC104826709 Tarenaya hassleriana HOM05D007435 ORTHO05D009338 9.8e-10 67.4 100 42.0
Aa31LG2G18760 Aethionema arabicum HOM05D007435 ORTHO05D009338 1.3e-09 67.0 101 40.6
QL04p012434 Quercus lobata HOM05D007435 ORTHO05D009338 1.3e-09 67.0 84 47.6
MD02G1297000 Malus domestica HOM05D007435 ORTHO05D009338 2.2e-09 66.2 129 40.3
CSS0019859 Camellia sinensis var. sinensis HOM05D007435 ORTHO05D009338 2.9e-09 65.9 111 44.1
A01p06670 Brassica napus HOM05D005366 ORTHO05D006323 6.4e-09 64.7 100 42.0
AL343U10010 Arabidopsis lyrata HOM05D007435 ORTHO05D009338 8.3e-09 64.3 130 35.4
CANSAT80G0490 Cannabis sativa HOM05D007435 ORTHO05D009338 8.3e-09 64.3 157 36.3
Sp7g29390 Schrenkiella parvula HOM05D007435 ORTHO05D009338 8.3e-09 64.3 126 36.5
Sc10g0004150 Simmondsia chinensis HOM05D007435 ORTHO05D009338 8.3e-09 64.3 115 40.9
unitig_578.g16053 Utricularia gibba HOM05D007435 ORTHO05D009338 8.3e-09 64.3 113 40.7
ATR0006G035 Amborella trichopoda HOM05D007435 ORTHO05D009338 1.1e-08 63.9 136 35.3
COL.COLO4_19345 Corchorus olitorius HOM05D007435 ORTHO05D009338 1.1e-08 63.9 133 38.3
Duzib128G0703 Durio zibethinus HOM05D007435 ORTHO05D009338 1.1e-08 63.9 131 41.2
MBI13_g04786_MAGBIO Magnolia biondii HOM05D007435 ORTHO05D009338 1.1e-08 63.9 108 46.3
PSO339G5565 Papaver somniferum HOM05D007435 ORTHO05D009338 1.4e-08 63.5 98 41.8
Rhsim05G0126700 Rhododendron simsii HOM05D007435 ORTHO05D009338 1.4e-08 63.5 119 39.5
BraA01t00625Z Brassica rapa HOM05D005366 ORTHO05D006323 1.9e-08 63.2 99 41.4
Thhalv10026511m.g Eutrema salsugineum HOM05D007435 ORTHO05D009338 2.4e-08 62.8 101 39.6
Duzib114G0226 Durio zibethinus HOM05D007435 ORTHO05D009338 3.2e-08 62.4 138 37.0
C07p58750 Brassica napus HOM05D007435 ORTHO05D009338 5.4e-08 61.6 131 39.7
BolC7t46323H Brassica oleracea HOM05D007435 ORTHO05D009338 5.4e-08 61.6 131 39.7
Gohir.D10G251200 Gossypium hirsutum HOM05D007435 ORTHO05D009338 5.4e-08 61.6 92 42.4
Gorai.011G291600 Gossypium raimondii HOM05D007435 ORTHO05D009338 5.4e-08 61.6 92 42.4
Nitab4.5_0000316g0230 Nicotiana tabacum HOM05D002000 ORTHO05D002027 5.4e-08 61.6 137 37.2
Aqoxy1G00332 Aquilegia oxysepala HOM05D007435 ORTHO05D009338 7.1e-08 61.2 78 43.6
C01p07440 Brassica napus HOM05D007435 ORTHO05D009338 7.1e-08 61.2 145 34.5
BolC1t00726H Brassica oleracea HOM05D007435 ORTHO05D009338 7.1e-08 61.2 145 34.5
BcaNung01514 Brassica carinata HOM05D007435 ORTHO05D009338 1.6e-07 60.1 124 38.7
BcaNung04129 Brassica carinata HOM05D007435 ORTHO05D009338 1.6e-07 60.1 145 36.6
DCAR_009211 Daucus carota HOM05D007435 ORTHO05D009338 1.6e-07 60.1 133 32.3
HanXRQChr01g0020861 Helianthus annuus HOM05D007435 ORTHO05D009338 2.1e-07 59.7 111 38.7
Nitab4.5_0001775g0080 Nicotiana tabacum HOM05D007435 ORTHO05D009338 2.1e-07 59.7 115 40.9
BcaC09g51937 Brassica carinata HOM05D007435 ORTHO05D009338 3.5e-07 58.9 142 33.8
A03p60860 Brassica napus HOM05D007435 ORTHO05D009338 3.5e-07 58.9 102 42.2
BraA03t15122Z Brassica rapa HOM05D007435 ORTHO05D009338 3.5e-07 58.9 102 42.2
Lsat_1_v5_gn_1_100400 Lactuca sativa HOM05D007435 ORTHO05D009338 4.6e-07 58.5 144 35.4
Peaxi162Scf00087g00129 Petunia axillaris HOM05D007435 ORTHO05D009338 6.0e-07 58.2 105 38.1
SGA_v2.0_scaffold354G49740 Striga asiatica HOM05D007435 ORTHO05D009338 1.0e-06 57.4 108 38.9
Gohir.A10G239300 Gossypium hirsutum HOM05D007435 ORTHO05D009338 1.3e-06 57.0 94 43.6
Potri.001G022500 Populus trichocarpa HOM05D007435 ORTHO05D009338 1.7e-06 56.6 150 35.3
Solyc01g068190.3 Solanum lycopersicum HOM05D007435 ORTHO05D009338 1.7e-06 56.6 107 42.1
Sopen01g030130 Solanum pennellii HOM05D007435 ORTHO05D009338 1.7e-06 56.6 107 42.1
PGSC0003DMG401006753 Solanum tuberosum HOM05D007435 ORTHO05D009338 2.3e-06 56.2 100 41.0
Hma1.2p1_0269F.1_g107800 Hydrangea macrophylla HOM05D007435 ORTHO05D009338 3.0e-06 55.8 62 50.0
PGR031G0502 Punica granatum HOM05D007435 ORTHO05D009338 3.0e-06 55.8 126 38.1
ECA248G3437 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.1e-06 55.1 99 35.4
Hund13323 Selenicereus undatus HOM05D000185 ORTHO05D000105 5.1e-06 55.1 83 43.4
CDE08G0963 Ceratophyllum demersum HOM05D000584 ORTHO05D009338 6.6e-06 54.7 131 35.1
Migut.N01821 Erythranthe guttata HOM05D007435 ORTHO05D009338 6.6e-06 54.7 129 36.4


User provided reference genes

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