Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G029200 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 1.4e-276 955.7 490 100.0
Phvul.005G029000 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 2.6e-161 572.8 368 80.7
Phvul.007G047200 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 5.6e-132 475.3 398 66.1
VMungo0720G1031 Vigna mungo HOM05D003497 ORTHO05D003964 1.5e-129 467.2 398 65.6
Glyma.10G255600 Glycine max HOM05D003497 ORTHO05D003964 4.6e-118 429.1 404 62.4
Phvul.005G037100 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 1.7e-117 427.2 387 65.9
Glyma.20G135900 Glycine max HOM05D003497 ORTHO05D003964 3.0e-117 426.4 401 62.1
TPR.G21155 Trifolium pratense HOM05D003497 ORTHO05D003964 1.3e-96 357.8 402 53.7
Ca_11026_v3 Cicer arietinum L. HOM05D003497 ORTHO05D003964 1.1e-95 354.8 401 52.6
arahy.Tifrunner.gnm1.ann1.6MCD86 Arachis hypogaea HOM05D003497 ORTHO05D003964 3.5e-94 349.7 408 50.7
Medtr1g106020 Medicago truncatula HOM05D003497 ORTHO05D003964 8.7e-93 345.1 397 52.1
Psat6g213160 Pisum sativum HOM05D003497 ORTHO05D003964 2.9e-88 330.1 385 53.2
Lj5g0015963 Lotus japonicus HOM05D003497 ORTHO05D003964 6.4e-88 328.9 403 49.6
Lalb_Chr06g0164971 Lupinus albus HOM05D003497 ORTHO05D003964 3.0e-85 320.1 385 51.9
GSVIVG01037051001 Vitis vinifera HOM05D003497 ORTHO05D003964 6.5e-64 249.2 431 42.2
MELO3C018024.2 Cucumis melo HOM05D003497 ORTHO05D003964 1.9e-63 247.7 437 40.5
ClCG10G010030 Citrullus lanatus HOM05D003497 ORTHO05D003964 1.6e-62 244.6 412 41.5
Nn3g19312 Nelumbo nucifera HOM05D003497 ORTHO05D003964 2.7e-62 243.8 395 41.3
CsaV3_4G000070 Cucumis sativus L. HOM05D003497 ORTHO05D003964 2.3e-61 240.7 449 39.0
Medtr4g019560 Medicago truncatula HOM05D003497 ORTHO05D003964 3.9e-61 240.0 251 51.8
Nn6g34530 Nelumbo nucifera HOM05D003497 ORTHO05D003964 1.1e-60 238.4 395 40.5
TAR381G0023 Trochodendron aralioides HOM05D003497 ORTHO05D003964 1.1e-60 238.4 397 41.1
CSS0043603 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 1.5e-60 238.0 435 39.3
CiPaw.06G163900 Carya illinoinensis HOM05D003497 ORTHO05D003964 1.5e-60 238.0 473 39.1
Sed0023460 Sechium edule HOM05D003497 ORTHO05D003964 3.3e-60 236.9 437 39.4
Medtr7g057330 Medicago truncatula HOM05D003497 ORTHO05D003964 9.7e-60 235.3 252 51.6
Gohir.A13G047900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 1.1e-58 231.9 404 39.4
Gorai.013G052000 Gossypium raimondii HOM05D003497 ORTHO05D003964 1.4e-58 231.5 404 39.1
Prupe.8G150500 Prunus persica HOM05D003497 ORTHO05D003964 5.3e-58 229.6 429 39.2
Haze_10291 Corylus avellana HOM05D003497 ORTHO05D003964 6.9e-58 229.2 446 37.4
Thecc.02G120200 Theobroma cacao HOM05D003497 ORTHO05D003964 1.5e-57 228.0 426 38.0
Gohir.D13G046300 Gossypium hirsutum HOM05D003497 ORTHO05D003964 2.0e-57 227.6 404 38.9
Manes.07G056700 Manihot esculenta HOM05D003497 ORTHO05D003964 3.4e-57 226.9 470 36.8
TWI14G1256 Tripterygium wilfordii HOM05D003497 ORTHO05D003964 5.9e-57 226.1 454 36.6
RcHm_v2.0_Chr6g0248431 Rosa chinensis HOM05D003497 ORTHO05D003964 3.8e-56 223.4 436 37.2
Ciclev10028208m.g Citrus clementina HOM05D003497 ORTHO05D003964 5.0e-56 223.0 458 37.6
Potri.005G109700 Populus trichocarpa HOM05D003497 ORTHO05D003964 8.5e-56 222.2 478 35.4
QL11p029247 Quercus lobata HOM05D003497 ORTHO05D003964 1.9e-55 221.1 468 36.8
Sabra05G0090000 Salix brachista HOM05D003497 ORTHO05D003964 2.5e-55 220.7 478 35.8
Cfa004695 Carpinus fangiana HOM05D003497 ORTHO05D003964 7.2e-55 219.2 456 36.0
Atru.chr5.2286 Acer truncatum HOM05D003497 ORTHO05D003964 1.6e-54 218.0 438 37.2
Rhsim05G0093000 Rhododendron simsii HOM05D003497 ORTHO05D003964 6.1e-54 216.1 484 36.0
MSTRG.16671 Avicennia marina HOM05D003497 ORTHO05D003964 1.8e-53 214.5 432 37.5
FAN27G0942 Fragaria x ananassa HOM05D003497 ORTHO05D003964 3.0e-53 213.8 402 39.1
Lsat_1_v5_gn_5_117220 Lactuca sativa HOM05D003497 ORTHO05D003964 3.9e-53 213.4 415 37.6
vmacro22257 Vaccinium macrocarpon HOM05D003497 ORTHO05D003964 3.3e-52 210.3 469 35.2
HanXRQChr16g0502181 Helianthus annuus HOM05D003497 ORTHO05D003964 4.4e-52 209.9 438 35.8
COL.COLO4_32482 Corchorus olitorius HOM05D003497 ORTHO05D003964 1.7e-51 208.0 421 37.1
FvH4_2g03310 Fragaria vesca HOM05D003497 ORTHO05D003964 1.7e-51 208.0 443 37.2
TAR625G0452 Trochodendron aralioides HOM05D003497 ORTHO05D003964 1.7e-51 208.0 448 35.0
FAN20G1538 Fragaria x ananassa HOM05D003497 ORTHO05D003964 2.8e-51 207.2 442 37.1
FAN20G2306 Fragaria x ananassa HOM05D003497 ORTHO05D003964 2.8e-51 207.2 442 37.1
CANSAT25G1915 Cannabis sativa HOM05D003497 ORTHO05D003964 5.3e-50 203.0 401 36.2
Duzib132G0146 Durio zibethinus HOM05D003497 ORTHO05D003964 5.3e-50 203.0 429 35.9
ECA234G0007 Erigeron canadensis HOM05D003497 ORTHO05D003964 5.3e-50 203.0 468 33.3
PSO017G1612 Papaver somniferum HOM05D003497 ORTHO05D003964 7.0e-50 202.6 456 34.9
DCAR_021943 Daucus carota HOM05D003497 ORTHO05D003964 9.1e-50 202.2 443 35.9
SalBow6G6060 Salvia bowleyana HOM05D003497 ORTHO05D003964 9.1e-50 202.2 387 38.5
Nitab4.5_0003918g0020 Nicotiana tabacum HOM05D003497 ORTHO05D003964 4.5e-49 199.9 429 35.7
Eucgr.I02495 Eucalyptus grandis HOM05D003497 ORTHO05D003964 5.9e-49 199.5 439 35.1
SGA_v2.0_scaffold225G43063 Striga asiatica HOM05D003497 ORTHO05D003964 5.9e-49 199.5 415 36.6
BraA07t29128Z Brassica rapa HOM05D003497 ORTHO05D003964 7.7e-49 199.1 424 35.6
Eucgr.G00280 Eucalyptus grandis HOM05D003497 ORTHO05D003964 1.3e-48 198.4 361 38.8
A07p13790 Brassica napus HOM05D003497 ORTHO05D003964 1.7e-48 198.0 424 35.4
Nitab4.5_0000003g0710 Nicotiana tabacum HOM05D003497 ORTHO05D003964 1.7e-48 198.0 433 34.9
BcaC06g35052 Brassica carinata HOM05D003497 ORTHO05D003964 3.8e-48 196.8 433 34.4
BolC7t42548H Brassica oleracea HOM05D003497 ORTHO05D003964 3.8e-48 196.8 433 34.4
C07p20260 Brassica napus HOM05D003497 ORTHO05D003964 5.0e-48 196.4 426 34.7
Peaxi162Scf00152g00641 Petunia axillaris HOM05D003497 ORTHO05D003964 1.1e-47 195.3 435 36.6
PGSC0003DMG400021329 Solanum tuberosum HOM05D003497 ORTHO05D003964 2.5e-47 194.1 445 34.8
AUR62027025 Chenopodium quinoa HOM05D003497 ORTHO05D003964 1.2e-46 191.8 483 33.3
THA.LOC104822142 Tarenaya hassleriana HOM05D003497 ORTHO05D003964 2.1e-46 191.0 445 33.0
unitig_744.g24206 Utricularia gibba HOM05D003497 ORTHO05D003964 2.1e-46 191.0 441 35.4
BcaB03g14136 Brassica carinata HOM05D003497 ORTHO05D003964 3.6e-46 190.3 410 35.1
PSO170G5054 Papaver somniferum HOM05D003497 ORTHO05D003964 4.7e-46 189.9 482 33.4
Aa31LG7G7660 Aethionema arabicum HOM05D003497 ORTHO05D003964 1.0e-45 188.7 454 34.1
Sp7g01980 Schrenkiella parvula HOM05D003497 ORTHO05D003964 1.0e-45 188.7 387 37.0
AUR62030867 Chenopodium quinoa HOM05D003497 ORTHO05D003964 1.8e-45 188.0 479 33.2
Cc02_g20070 Coffea canephora HOM05D003497 ORTHO05D003964 1.8e-45 188.0 466 34.1
Sopen01g002980 Solanum pennellii HOM05D003497 ORTHO05D003964 1.8e-45 188.0 437 34.1
Sc18g0007350 Simmondsia chinensis HOM05D003497 ORTHO05D003964 2.3e-45 187.6 452 34.1
Migut.B00464 Erythranthe guttata HOM05D003497 ORTHO05D003964 5.2e-45 186.4 416 36.1
Ah.01g007110 Amaranthus hybridus HOM05D003497 ORTHO05D003964 6.7e-45 186.0 474 33.5
Solyc01g006990.4 Solanum lycopersicum HOM05D003497 ORTHO05D003964 1.1e-44 185.3 439 33.9
Oeu025307.1 Olea europaea HOM05D003497 ORTHO05D003964 2.0e-44 184.5 430 34.2
CARHR024190 Cardamine hirsuta HOM05D003497 ORTHO05D003964 3.3e-44 183.7 415 33.5
Actinidia28001 Actinidia chinensis HOM05D000349 ORTHO05D003964 5.7e-44 183.0 271 42.8
AL1G37530 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 7.5e-44 182.6 412 35.7
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 9.7e-44 182.2 398 34.7
CSS0013379 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 1.7e-43 181.4 266 43.6
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 2.2e-43 181.0 398 34.4
Carub.0001s2329 Capsella rubella HOM05D003497 ORTHO05D003964 3.7e-43 180.3 424 34.4
AT1G23780 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 6.3e-43 179.5 414 34.1
CSS0047045 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 1.1e-42 178.7 266 44.0
Thhalv10009461m.g Eutrema salsugineum HOM05D003497 ORTHO05D003964 2.4e-42 177.6 417 33.1
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 3.1e-42 177.2 398 33.7
MD05G1106300 Malus domestica HOM05D003497 ORTHO05D003964 9.1e-42 175.6 428 34.6
HPP92_007713 Vanilla planifolia HOM05D003497 ORTHO05D003964 9.1e-42 175.6 392 34.4
Eucgr.H03378 Eucalyptus grandis HOM05D003497 ORTHO05D003964 1.2e-41 175.3 392 36.0
CSS0013739 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 2.0e-41 174.5 280 39.3
PGR142G0099 Punica granatum HOM05D003497 ORTHO05D003964 2.0e-41 174.5 450 33.3
THA.LOC104824678 Tarenaya hassleriana HOM05D003497 ORTHO05D003964 2.7e-41 174.1 402 32.8
EL10Ac9g22176 Beta vulgaris HOM05D003497 ORTHO05D003964 4.5e-41 173.3 484 32.6
CARHR164020 Cardamine hirsuta HOM05D003497 ORTHO05D003964 1.0e-40 172.2 396 33.1
Sp1g21160 Schrenkiella parvula HOM05D003497 ORTHO05D003964 2.2e-40 171.0 448 31.7
ATR0739G052 Amborella trichopoda HOM05D003497 ORTHO05D003964 3.8e-40 170.2 459 32.0
CARHR164040 Cardamine hirsuta HOM05D003497 ORTHO05D003964 3.8e-40 170.2 397 34.8
Cpa.g.c35687 Carica papaya HOM05D003497 ORTHO05D003964 8.5e-40 169.1 370 37.8
Atru.chr5.2290 Acer truncatum HOM05D003497 ORTHO05D003964 3.2e-39 167.2 295 38.6
SEGI_36088 Sequoiadendron giganteum HOM05D003497 ORTHO05D003964 1.5e-36 158.3 451 30.6
BolC4t26586H Brassica oleracea HOM05D003497 ORTHO05D003964 2.6e-36 157.5 373 35.4
C04p49930 Brassica napus HOM05D003497 ORTHO05D003964 3.4e-36 157.1 373 35.4
TWI14G0922 Tripterygium wilfordii HOM05D003497 ORTHO05D003964 1.3e-35 155.2 273 41.8
Carub.0002s1705 Capsella rubella HOM05D003497 ORTHO05D003964 1.7e-35 154.8 387 33.6
CAN.G911.43 Capsicum annuum HOM05D003497 ORTHO05D003964 2.2e-35 154.5 257 40.5
A04p15640 Brassica napus HOM05D003497 ORTHO05D003964 3.7e-35 153.7 374 34.0
BraA04t17199Z Brassica rapa HOM05D003497 ORTHO05D003964 4.8e-35 153.3 373 33.2
AT1G23770 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 1.8e-34 151.4 251 39.0
BcaC02g08840 Brassica carinata HOM05D003497 ORTHO05D003964 2.4e-34 151.0 363 34.7
Haze_10298 Corylus avellana HOM05D003497 ORTHO05D003964 2.4e-34 151.0 236 42.8
BcaB06g27743 Brassica carinata HOM05D003497 ORTHO05D003964 3.1e-34 150.6 373 33.5
AL1G37520 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 2.0e-33 147.9 251 38.6
BcaB03g11953 Brassica carinata HOM05D003497 ORTHO05D003964 1.0e-32 145.6 230 39.6
Sed0000294 Sechium edule HOM05D003497 ORTHO05D003964 1.2e-30 138.7 337 33.8
Carub.0001s2328 Capsella rubella HOM05D003497 ORTHO05D003964 4.7e-30 136.7 287 35.5
RcHm_v2.0_Chr4g0407371 Rosa chinensis HOM05D003497 ORTHO05D003964 1.4e-29 135.2 291 35.7
FAN04G2985 Fragaria x ananassa HOM05D003497 ORTHO05D003964 6.8e-29 132.9 310 33.5
MD10G1110700 Malus domestica HOM05D003497 ORTHO05D003964 6.8e-29 132.9 324 33.6
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 8.8e-29 132.5 459 29.8
FvH4_5g20811 Fragaria vesca HOM05D003497 ORTHO05D003964 1.5e-28 131.7 295 35.3
Dinv09537 Davidia involucrata HOM05D006380 ORTHO05D008400 2.0e-28 131.3 374 31.6
MD10G1110300 Malus domestica HOM05D003497 ORTHO05D003964 2.6e-28 131.0 223 39.0
RcHm_v2.0_Chr4g0407381 Rosa chinensis HOM05D003497 ORTHO05D003964 2.6e-28 131.0 294 33.3
Aqoxy5G00815 Aquilegia oxysepala HOM05D003497 ORTHO05D003964 5.7e-28 129.8 214 38.8
PGR102G1733 Punica granatum HOM05D003497 ORTHO05D003964 1.3e-27 128.6 256 35.5
CDE04G1396 Ceratophyllum demersum HOM05D003497 ORTHO05D003964 2.2e-27 127.9 287 35.5
FAN18G2835 Fragaria x ananassa HOM05D003497 ORTHO05D003964 3.7e-27 127.1 296 35.1
MBI16_g32073_MAGBIO Magnolia biondii HOM05D003497 ORTHO05D003964 3.7e-27 127.1 287 34.5
MD10G1110600 Malus domestica HOM05D003497 ORTHO05D003964 8.3e-27 125.9 254 36.2
RcHm_v2.0_Chr4g0407391 Rosa chinensis HOM05D003497 ORTHO05D003964 8.3e-27 125.9 297 34.0
AL2G29670 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 1.4e-26 125.2 199 39.2
Zm00001eb009480 Zea mays HOM05D003497 ORTHO05D003964 5.4e-26 123.2 422 28.4
HanXRQChr10g0290301 Helianthus annuus HOM05D003497 ORTHO05D003964 7.0e-26 122.9 240 33.8
Os03g0232000 Oryza sativa ssp. japonica HOM05D003497 ORTHO05D003964 2.0e-25 121.3 404 27.2
Migut.B00469 Erythranthe guttata HOM05D003497 ORTHO05D003964 3.5e-25 120.6 245 38.8
HanXRQChr10g0290281 Helianthus annuus HOM05D003497 ORTHO05D003964 1.0e-24 119.0 240 33.3
AagrBONN_evm.TU.Sc2ySwM_344.3993 Anthoceros agrestis HOM05D003497 ORTHO05D003964 1.3e-24 118.6 292 32.2
PGR102G1148 Punica granatum HOM05D003497 ORTHO05D003964 5.0e-24 116.7 237 36.7
COL.COLO4_32483 Corchorus olitorius HOM05D003497 ORTHO05D003964 8.6e-24 115.9 259 32.8
Ciclev10028907m.g Citrus clementina HOM05D003497 ORTHO05D003964 1.1e-23 115.5 261 34.9
Sed0003270 Sechium edule HOM05D003497 ORTHO05D003964 1.5e-23 115.2 367 29.4
Migut.B00470 Erythranthe guttata HOM05D003497 ORTHO05D003964 4.3e-23 113.6 234 35.9
Sed0016990 Sechium edule HOM05D003497 ORTHO05D003964 9.5e-23 112.5 353 30.0
AT1G70360 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 3.6e-22 110.5 195 35.4
RcHm_v2.0_Chr4g0395411 Rosa chinensis HOM05D003497 ORTHO05D003964 8.0e-22 109.4 152 40.8
PSO170G0850 Papaver somniferum HOM05D003497 ORTHO05D003964 3.0e-21 107.5 259 31.3
Mapoly0001s0353 Marchantia polymorpha HOM05D003497 ORTHO05D003964 8.9e-21 105.9 272 29.8
HanXRQChr10g0290271 Helianthus annuus HOM05D003497 ORTHO05D003964 1.2e-20 105.5 180 37.2
Pp3c15_1340 Physcomitrium patens HOM05D003497 ORTHO05D003964 1.2e-20 105.5 280 30.0
PSO017G7033 Papaver somniferum HOM05D003497 ORTHO05D003964 1.5e-20 105.1 259 31.3
MD10G1175800 Malus domestica HOM05D003497 ORTHO05D003964 1.7e-19 101.7 247 34.0
Haze_10290 Corylus avellana HOM05D003497 ORTHO05D003964 5.9e-17 93.2 229 34.5
PGR119G2181 Punica granatum HOM05D003497 ORTHO05D003964 1.0e-16 92.4 135 41.5
Potri.015G020600 Populus trichocarpa HOM05D003497 ORTHO05D003964 2.3e-16 91.3 81 53.1
AL5G35170 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 3.0e-16 90.9 114 43.0
Haze_10296 Corylus avellana HOM05D003497 ORTHO05D003964 3.9e-16 90.5 64 65.6
Actinidia04396 Actinidia chinensis HOM05D003497 ORTHO05D003964 3.3e-15 87.4 183 35.5
MD10G1110400 Malus domestica HOM05D003497 ORTHO05D003964 3.3e-15 87.4 96 49.0
CiPaw.08G128300 Carya illinoinensis HOM05D000212 ORTHO05D003964 5.6e-15 86.7 132 40.9
BcaC02g08839 Brassica carinata HOM05D003497 ORTHO05D003964 1.6e-14 85.1 152 37.5
Sed0009840 Sechium edule HOM05D003497 ORTHO05D003964 2.1e-14 84.7 161 34.2
PSO017G5705 Papaver somniferum HOM05D003497 ORTHO05D003964 4.0e-13 80.5 125 39.2
SMO270G0122 Selaginella moellendorffii HOM05D003497 ORTHO05D003964 8.9e-13 79.3 185 33.0
PSO170G1569 Papaver somniferum HOM05D003497 ORTHO05D003964 2.0e-12 78.2 80 50.0
PSO017G1120 Papaver somniferum HOM05D003497 ORTHO05D003964 4.4e-12 77.0 211 32.2
arahy.Tifrunner.gnm1.ann1.HH0ZDZ Arachis hypogaea HOM05D003497 ORTHO05D003964 4.9e-11 73.6 74 51.4
Cfa004698 Carpinus fangiana HOM05D003497 ORTHO05D003964 4.9e-11 73.6 85 50.6
arahy.Tifrunner.gnm1.ann1.D86B0Q Arachis hypogaea HOM05D003497 ORTHO05D003964 1.9e-10 71.6 104 42.3
CBR_g19394 Chara braunii HOM05D003497 ORTHO05D003964 2.4e-10 71.2 102 41.2
Lsat_1_v5_gn_5_117240 Lactuca sativa HOM05D003497 ORTHO05D003964 2.4e-10 71.2 81 43.2
SEGI_41103 Sequoiadendron giganteum HOM05D003497 ORTHO05D003964 5.4e-10 70.1 211 28.9
Actinidia02442 Actinidia chinensis HOM05D003497 ORTHO05D003964 9.2e-10 69.3 76 46.1
Os10g0130200 Oryza sativa ssp. japonica HOM05D019728 ORTHO05D023023 1.6e-09 68.6 165 30.3
Migut.B00467 Erythranthe guttata HOM05D003497 ORTHO05D003964 1.5e-07 62.0 101 38.6
C03p57300 Brassica napus HOM05D003497 ORTHO05D003964 3.3e-07 60.8 163 35.0


User provided reference genes

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