Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G029000 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 5.2e-218 760.8 388 100.0
Phvul.005G029200 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 1.0e-160 570.5 368 80.7
Phvul.007G047200 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 8.9e-125 451.1 406 63.3
VMungo0720G1031 Vigna mungo HOM05D003497 ORTHO05D003964 8.3e-123 444.5 406 62.3
Phvul.005G037100 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 1.2e-113 414.1 377 65.5
Glyma.10G255600 Glycine max HOM05D003497 ORTHO05D003964 2.7e-113 412.9 409 59.4
Glyma.20G135900 Glycine max HOM05D003497 ORTHO05D003964 2.1e-110 403.3 398 60.1
Ca_11026_v3 Cicer arietinum L. HOM05D003497 ORTHO05D003964 4.9e-91 339.0 414 50.5
TPR.G21155 Trifolium pratense HOM05D003497 ORTHO05D003964 1.6e-89 334.0 406 51.7
arahy.Tifrunner.gnm1.ann1.6MCD86 Arachis hypogaea HOM05D003497 ORTHO05D003964 3.5e-89 332.8 441 47.8
Lj5g0015963 Lotus japonicus HOM05D003497 ORTHO05D003964 1.5e-87 327.4 406 49.3
Medtr1g106020 Medicago truncatula HOM05D003497 ORTHO05D003964 4.3e-87 325.9 411 48.7
Psat6g213160 Pisum sativum HOM05D003497 ORTHO05D003964 2.4e-85 320.1 375 53.1
Lalb_Chr06g0164971 Lupinus albus HOM05D003497 ORTHO05D003964 3.9e-80 302.8 387 50.4
GSVIVG01037051001 Vitis vinifera HOM05D003497 ORTHO05D003964 2.5e-63 246.9 431 40.8
MELO3C018024.2 Cucumis melo HOM05D003497 ORTHO05D003964 2.2e-62 243.8 433 40.9
Nn3g19312 Nelumbo nucifera HOM05D003497 ORTHO05D003964 1.4e-61 241.1 415 40.0
ClCG10G010030 Citrullus lanatus HOM05D003497 ORTHO05D003964 2.4e-61 240.4 416 41.8
Prupe.8G150500 Prunus persica HOM05D003497 ORTHO05D003964 6.9e-61 238.8 418 41.9
Nn6g34530 Nelumbo nucifera HOM05D003497 ORTHO05D003964 9.1e-61 238.4 415 39.8
CsaV3_4G000070 Cucumis sativus L. HOM05D003497 ORTHO05D003964 4.5e-60 236.1 410 41.5
CSS0043603 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 1.0e-59 235.0 434 38.9
CiPaw.06G163900 Carya illinoinensis HOM05D003497 ORTHO05D003964 8.5e-59 231.9 452 38.9
Thecc.02G120200 Theobroma cacao HOM05D003497 ORTHO05D003964 1.9e-58 230.7 433 38.3
Gorai.013G052000 Gossypium raimondii HOM05D003497 ORTHO05D003964 3.2e-58 229.9 418 40.0
Sed0023460 Sechium edule HOM05D003497 ORTHO05D003964 7.2e-58 228.8 446 38.8
QL11p029247 Quercus lobata HOM05D003497 ORTHO05D003964 9.4e-58 228.4 472 37.3
Gohir.D13G046300 Gossypium hirsutum HOM05D003497 ORTHO05D003964 1.2e-57 228.0 418 40.0
TAR381G0023 Trochodendron aralioides HOM05D003497 ORTHO05D003964 1.6e-57 227.6 399 40.1
Gohir.A13G047900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 2.1e-57 227.3 418 39.5
Medtr4g019560 Medicago truncatula HOM05D003497 ORTHO05D003964 6.7e-56 222.2 240 52.1
Medtr7g057330 Medicago truncatula HOM05D003497 ORTHO05D003964 1.1e-55 221.5 252 51.2
TWI14G1256 Tripterygium wilfordii HOM05D003497 ORTHO05D003964 3.3e-55 219.9 451 36.8
Atru.chr5.2286 Acer truncatum HOM05D003497 ORTHO05D003964 1.7e-54 217.6 431 37.4
FAN27G0942 Fragaria x ananassa HOM05D003497 ORTHO05D003964 1.7e-54 217.6 403 40.2
Sabra05G0090000 Salix brachista HOM05D003497 ORTHO05D003964 1.7e-54 217.6 483 35.4
Ciclev10028208m.g Citrus clementina HOM05D003497 ORTHO05D003964 2.2e-54 217.2 464 36.2
RcHm_v2.0_Chr6g0248431 Rosa chinensis HOM05D003497 ORTHO05D003964 2.8e-54 216.9 437 36.6
Potri.005G109700 Populus trichocarpa HOM05D003497 ORTHO05D003964 4.8e-54 216.1 481 35.3
Haze_10291 Corylus avellana HOM05D003497 ORTHO05D003964 8.2e-54 215.3 441 38.3
HanXRQChr16g0502181 Helianthus annuus HOM05D003497 ORTHO05D003964 5.3e-53 212.6 439 34.9
Rhsim05G0093000 Rhododendron simsii HOM05D003497 ORTHO05D003964 7.0e-53 212.2 479 35.7
FAN20G1538 Fragaria x ananassa HOM05D003497 ORTHO05D003964 1.3e-51 208.0 422 38.9
FAN20G2306 Fragaria x ananassa HOM05D003497 ORTHO05D003964 1.3e-51 208.0 422 38.9
Cfa004695 Carpinus fangiana HOM05D003497 ORTHO05D003964 2.9e-51 206.8 466 35.0
FvH4_2g03310 Fragaria vesca HOM05D003497 ORTHO05D003964 2.9e-51 206.8 436 37.4
Lsat_1_v5_gn_5_117220 Lactuca sativa HOM05D003497 ORTHO05D003964 8.5e-51 205.3 411 36.0
Manes.07G056700 Manihot esculenta HOM05D003497 ORTHO05D003964 1.1e-50 204.9 469 35.0
vmacro22257 Vaccinium macrocarpon HOM05D003497 ORTHO05D003964 1.5e-50 204.5 477 34.6
COL.COLO4_32482 Corchorus olitorius HOM05D003497 ORTHO05D003964 2.5e-50 203.8 417 37.4
Nitab4.5_0000003g0710 Nicotiana tabacum HOM05D003497 ORTHO05D003964 5.5e-50 202.6 422 36.3
MSTRG.16671 Avicennia marina HOM05D003497 ORTHO05D003964 7.2e-50 202.2 435 36.3
Eucgr.I02495 Eucalyptus grandis HOM05D003497 ORTHO05D003964 2.1e-49 200.7 442 35.3
ECA234G0007 Erigeron canadensis HOM05D003497 ORTHO05D003964 4.7e-49 199.5 482 31.7
Eucgr.G00280 Eucalyptus grandis HOM05D003497 ORTHO05D003964 6.1e-49 199.1 366 39.3
SalBow6G6060 Salvia bowleyana HOM05D003497 ORTHO05D003964 1.0e-48 198.4 397 37.5
TAR625G0452 Trochodendron aralioides HOM05D003497 ORTHO05D003964 6.7e-48 195.7 438 35.6
Duzib132G0146 Durio zibethinus HOM05D003497 ORTHO05D003964 1.5e-47 194.5 429 35.7
CANSAT25G1915 Cannabis sativa HOM05D003497 ORTHO05D003964 3.3e-47 193.4 412 35.4
DCAR_021943 Daucus carota HOM05D003497 ORTHO05D003964 3.3e-47 193.4 439 35.1
Ah.01g007110 Amaranthus hybridus HOM05D003497 ORTHO05D003964 4.4e-47 193.0 487 33.3
Nitab4.5_0003918g0020 Nicotiana tabacum HOM05D003497 ORTHO05D003964 4.4e-47 193.0 423 35.5
Sc18g0007350 Simmondsia chinensis HOM05D003497 ORTHO05D003964 7.4e-47 192.2 452 35.0
PSO017G1612 Papaver somniferum HOM05D003497 ORTHO05D003964 2.8e-46 190.3 453 34.9
SGA_v2.0_scaffold225G43063 Striga asiatica HOM05D003497 ORTHO05D003964 1.4e-45 188.0 417 35.3
AUR62030867 Chenopodium quinoa HOM05D003497 ORTHO05D003964 1.6e-44 184.5 480 33.8
Migut.B00464 Erythranthe guttata HOM05D003497 ORTHO05D003964 3.5e-44 183.3 417 34.5
THA.LOC104822142 Tarenaya hassleriana HOM05D003497 ORTHO05D003964 3.5e-44 183.3 446 34.1
AUR62027025 Chenopodium quinoa HOM05D003497 ORTHO05D003964 5.9e-44 182.6 484 33.1
Peaxi162Scf00152g00641 Petunia axillaris HOM05D003497 ORTHO05D003964 1.0e-43 181.8 432 35.2
CSS0013379 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 1.3e-43 181.4 268 42.2
MD05G1106300 Malus domestica HOM05D003497 ORTHO05D003964 1.7e-43 181.0 437 34.8
PSO170G5054 Papaver somniferum HOM05D003497 ORTHO05D003964 1.7e-43 181.0 478 33.5
BcaC06g35052 Brassica carinata HOM05D003497 ORTHO05D003964 2.2e-43 180.6 409 34.5
BolC7t42548H Brassica oleracea HOM05D003497 ORTHO05D003964 2.2e-43 180.6 409 34.5
Eucgr.H03378 Eucalyptus grandis HOM05D003497 ORTHO05D003964 2.2e-43 180.6 404 35.1
PGSC0003DMG400021329 Solanum tuberosum HOM05D003497 ORTHO05D003964 2.2e-43 180.6 432 35.0
BraA07t29128Z Brassica rapa HOM05D003497 ORTHO05D003964 2.9e-43 180.3 405 33.3
BcaB03g14136 Brassica carinata HOM05D003497 ORTHO05D003964 3.8e-43 179.9 423 33.6
A07p13790 Brassica napus HOM05D003497 ORTHO05D003964 3.8e-43 179.9 413 33.9
CSS0013739 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 5.0e-43 179.5 287 40.4
CSS0047045 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 5.0e-43 179.5 268 42.5
Cc02_g20070 Coffea canephora HOM05D003497 ORTHO05D003964 6.5e-43 179.1 479 33.2
Aa31LG7G7660 Aethionema arabicum HOM05D003497 ORTHO05D003964 8.5e-43 178.7 454 33.0
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 8.5e-43 178.7 403 35.0
C07p20260 Brassica napus HOM05D003497 ORTHO05D003964 1.9e-42 177.6 413 33.9
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 1.9e-42 177.6 403 34.7
unitig_744.g24206 Utricularia gibba HOM05D003497 ORTHO05D003964 1.9e-42 177.6 441 33.6
PGR142G0099 Punica granatum HOM05D003497 ORTHO05D003964 3.2e-42 176.8 426 34.3
Sopen01g002980 Solanum pennellii HOM05D003497 ORTHO05D003964 5.5e-42 176.0 429 35.2
Solyc01g006990.4 Solanum lycopersicum HOM05D003497 ORTHO05D003964 1.6e-41 174.5 431 34.6
THA.LOC104824678 Tarenaya hassleriana HOM05D003497 ORTHO05D003964 1.6e-41 174.5 437 32.7
CARHR024190 Cardamine hirsuta HOM05D003497 ORTHO05D003964 2.7e-41 173.7 423 33.6
Sp7g01980 Schrenkiella parvula HOM05D003497 ORTHO05D003964 4.7e-41 172.9 385 35.8
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 6.1e-41 172.6 399 34.1
HPP92_007713 Vanilla planifolia HOM05D003497 ORTHO05D003964 6.1e-41 172.6 395 33.2
Actinidia28001 Actinidia chinensis HOM05D000349 ORTHO05D003964 8.0e-41 172.2 268 42.5
AL1G37530 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 1.8e-40 171.0 413 35.1
Atru.chr5.2290 Acer truncatum HOM05D003497 ORTHO05D003964 4.0e-40 169.9 298 39.6
ATR0739G052 Amborella trichopoda HOM05D003497 ORTHO05D003964 4.0e-40 169.9 426 33.1
Carub.0001s2329 Capsella rubella HOM05D003497 ORTHO05D003964 6.8e-40 169.1 425 33.6
AT1G23780 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 3.4e-39 166.8 414 33.3
Thhalv10009461m.g Eutrema salsugineum HOM05D003497 ORTHO05D003964 9.8e-39 165.2 440 32.0
EL10Ac9g22176 Beta vulgaris HOM05D003497 ORTHO05D003964 2.8e-38 163.7 473 33.4
TWI14G0922 Tripterygium wilfordii HOM05D003497 ORTHO05D003964 4.8e-38 162.9 253 43.9
Cpa.g.c35687 Carica papaya HOM05D003497 ORTHO05D003964 2.7e-36 157.1 368 37.2
SEGI_36088 Sequoiadendron giganteum HOM05D003497 ORTHO05D003964 2.7e-36 157.1 447 31.3
Oeu025307.1 Olea europaea HOM05D003497 ORTHO05D003964 3.5e-36 156.8 241 41.5
CAN.G911.43 Capsicum annuum HOM05D003497 ORTHO05D003964 2.9e-35 153.7 266 40.6
CARHR164020 Cardamine hirsuta HOM05D003497 ORTHO05D003964 5.0e-35 152.9 398 32.2
Haze_10298 Corylus avellana HOM05D003497 ORTHO05D003964 5.0e-35 152.9 249 45.4
Sp1g21160 Schrenkiella parvula HOM05D003497 ORTHO05D003964 5.0e-35 152.9 447 31.1
Carub.0002s1705 Capsella rubella HOM05D003497 ORTHO05D003964 9.4e-34 148.7 381 33.6
MD10G1110700 Malus domestica HOM05D003497 ORTHO05D003964 1.6e-33 147.9 356 33.7
CARHR164040 Cardamine hirsuta HOM05D003497 ORTHO05D003964 3.6e-33 146.7 387 32.0
Sed0000294 Sechium edule HOM05D003497 ORTHO05D003964 1.2e-31 141.7 341 32.3
BolC4t26586H Brassica oleracea HOM05D003497 ORTHO05D003964 1.5e-31 141.4 367 33.8
AL1G37520 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 2.0e-31 141.0 269 38.7
C04p49930 Brassica napus HOM05D003497 ORTHO05D003964 3.4e-31 140.2 367 33.2
BcaB03g11953 Brassica carinata HOM05D003497 ORTHO05D003964 9.8e-31 138.7 236 40.7
AT1G23770 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 1.7e-30 137.9 252 39.7
BcaC02g08840 Brassica carinata HOM05D003497 ORTHO05D003964 2.2e-30 137.5 367 33.2
MD10G1110600 Malus domestica HOM05D003497 ORTHO05D003964 2.2e-30 137.5 249 39.4
BraA04t17199Z Brassica rapa HOM05D003497 ORTHO05D003964 3.7e-30 136.7 343 33.5
RcHm_v2.0_Chr4g0407381 Rosa chinensis HOM05D003497 ORTHO05D003964 1.4e-29 134.8 299 34.1
Dinv09537 Davidia involucrata HOM05D006380 ORTHO05D008400 2.4e-29 134.0 371 32.3
PGR102G1733 Punica granatum HOM05D003497 ORTHO05D003964 4.1e-29 133.3 252 36.9
Aqoxy5G00815 Aquilegia oxysepala HOM05D003497 ORTHO05D003964 3.5e-28 130.2 231 37.2
A04p15640 Brassica napus HOM05D003497 ORTHO05D003964 5.9e-28 129.4 343 32.7
MBI16_g32073_MAGBIO Magnolia biondii HOM05D003497 ORTHO05D003964 5.9e-28 129.4 259 35.5
RcHm_v2.0_Chr4g0407371 Rosa chinensis HOM05D003497 ORTHO05D003964 7.7e-28 129.0 260 37.3
CDE04G1396 Ceratophyllum demersum HOM05D003497 ORTHO05D003964 1.3e-27 128.3 293 33.8
MD10G1110300 Malus domestica HOM05D003497 ORTHO05D003964 1.7e-27 127.9 229 37.6
BcaB06g27743 Brassica carinata HOM05D003497 ORTHO05D003964 8.6e-27 125.6 364 31.3
FAN04G2985 Fragaria x ananassa HOM05D003497 ORTHO05D003964 2.5e-26 124.0 282 36.2
PGR102G1148 Punica granatum HOM05D003497 ORTHO05D003964 2.5e-26 124.0 229 38.4
FvH4_5g20811 Fragaria vesca HOM05D003497 ORTHO05D003964 4.2e-26 123.2 285 37.2
HanXRQChr10g0290301 Helianthus annuus HOM05D003497 ORTHO05D003964 5.5e-26 122.9 244 34.0
RcHm_v2.0_Chr4g0407391 Rosa chinensis HOM05D003497 ORTHO05D003964 5.5e-26 122.9 278 37.1
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 2.1e-25 120.9 454 29.1
HanXRQChr10g0290281 Helianthus annuus HOM05D003497 ORTHO05D003964 2.8e-25 120.6 246 33.7
Carub.0001s2328 Capsella rubella HOM05D003497 ORTHO05D003964 6.1e-25 119.4 246 34.1
FAN18G2835 Fragaria x ananassa HOM05D003497 ORTHO05D003964 1.0e-24 118.6 286 37.1
Migut.B00470 Erythranthe guttata HOM05D003497 ORTHO05D003964 2.3e-24 117.5 269 34.6
Migut.B00469 Erythranthe guttata HOM05D003497 ORTHO05D003964 1.2e-23 115.2 246 38.6
COL.COLO4_32483 Corchorus olitorius HOM05D003497 ORTHO05D003964 9.8e-23 112.1 234 34.6
Os03g0232000 Oryza sativa ssp. japonica HOM05D003497 ORTHO05D003964 9.8e-23 112.1 398 27.9
AL2G29670 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 1.7e-22 111.3 193 37.3
Sed0003270 Sechium edule HOM05D003497 ORTHO05D003964 1.7e-22 111.3 372 29.6
AagrBONN_evm.TU.Sc2ySwM_344.3993 Anthoceros agrestis HOM05D003497 ORTHO05D003964 2.9e-22 110.5 303 32.0
Sed0016990 Sechium edule HOM05D003497 ORTHO05D003964 3.7e-22 110.2 345 29.0
Mapoly0001s0353 Marchantia polymorpha HOM05D003497 ORTHO05D003964 1.8e-21 107.8 268 31.3
Pp3c15_1340 Physcomitrium patens HOM05D003497 ORTHO05D003964 1.8e-21 107.8 324 30.9
Ciclev10028907m.g Citrus clementina HOM05D003497 ORTHO05D003964 2.4e-21 107.5 268 32.8
Zm00001eb009480 Zea mays HOM05D003497 ORTHO05D003964 3.5e-20 103.6 401 26.4
RcHm_v2.0_Chr4g0395411 Rosa chinensis HOM05D003497 ORTHO05D003964 7.8e-20 102.4 105 50.5
Potri.015G020600 Populus trichocarpa HOM05D003497 ORTHO05D003964 1.3e-19 101.7 125 44.0
HanXRQChr10g0290271 Helianthus annuus HOM05D003497 ORTHO05D003964 1.7e-19 101.3 176 36.9
MD10G1175800 Malus domestica HOM05D003497 ORTHO05D003964 2.9e-19 100.5 263 33.5
Haze_10296 Corylus avellana HOM05D003497 ORTHO05D003964 2.5e-18 97.4 89 55.1
Actinidia04396 Actinidia chinensis HOM05D003497 ORTHO05D003964 3.3e-18 97.1 220 37.3
AT1G70360 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 4.3e-18 96.7 189 33.3
PSO170G0850 Papaver somniferum HOM05D003497 ORTHO05D003964 8.0e-17 92.4 248 30.6
PSO017G7033 Papaver somniferum HOM05D003497 ORTHO05D003964 2.3e-16 90.9 249 31.3
PGR119G2181 Punica granatum HOM05D003497 ORTHO05D003964 2.3e-16 90.9 130 41.5
Haze_10290 Corylus avellana HOM05D003497 ORTHO05D003964 4.4e-15 86.7 230 32.2
Sed0009840 Sechium edule HOM05D003497 ORTHO05D003964 4.4e-15 86.7 161 33.5
AL5G35170 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 4.9e-14 83.2 114 37.7
MD10G1110400 Malus domestica HOM05D003497 ORTHO05D003964 8.3e-14 82.4 84 48.8
Cfa004698 Carpinus fangiana HOM05D003497 ORTHO05D003964 1.4e-13 81.6 85 52.9
BcaC02g08839 Brassica carinata HOM05D003497 ORTHO05D003964 2.4e-13 80.9 152 35.5
CBR_g19394 Chara braunii HOM05D003497 ORTHO05D003964 2.4e-13 80.9 100 45.0
PSO170G1569 Papaver somniferum HOM05D003497 ORTHO05D003964 4.1e-13 80.1 82 56.1
arahy.Tifrunner.gnm1.ann1.D86B0Q Arachis hypogaea HOM05D003497 ORTHO05D003964 2.7e-12 77.4 137 41.6
PSO017G5705 Papaver somniferum HOM05D003497 ORTHO05D003964 4.6e-12 76.6 121 40.5
SMO270G0122 Selaginella moellendorffii HOM05D003497 ORTHO05D003964 7.8e-12 75.9 185 31.9
CiPaw.08G128300 Carya illinoinensis HOM05D000212 ORTHO05D003964 1.0e-11 75.5 134 34.3
PSO017G1120 Papaver somniferum HOM05D003497 ORTHO05D003964 1.0e-11 75.5 215 31.6
Lsat_1_v5_gn_5_117240 Lactuca sativa HOM05D003497 ORTHO05D003964 8.6e-11 72.4 79 48.1
SEGI_41103 Sequoiadendron giganteum HOM05D003497 ORTHO05D003964 9.5e-10 68.9 201 30.3
Actinidia02442 Actinidia chinensis HOM05D003497 ORTHO05D003964 2.1e-09 67.8 90 40.0
arahy.Tifrunner.gnm1.ann1.HH0ZDZ Arachis hypogaea HOM05D003497 ORTHO05D003964 2.8e-09 67.4 67 52.2
BcaC07g39213 Brassica carinata HOM05D003497 ORTHO05D024176 8.1e-09 65.9 287 27.9
Os10g0130200 Oryza sativa ssp. japonica HOM05D019728 ORTHO05D023023 2.3e-08 64.3 192 27.6
Migut.B00467 Erythranthe guttata HOM05D003497 ORTHO05D003964 5.2e-08 63.2 107 37.4


User provided reference genes

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