Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G028900 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 8.4e-90 333.6 157 100.0
Phvul.005G031300 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 1.4e-47 193.4 153 62.1
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 9.1e-44 180.6 133 62.4
VMungo1080G0686 Vigna mungo HOM05D002733 ORTHO05D003856 5.0e-42 174.9 129 62.8
Glyma.04G133200 Glycine max HOM05D002733 ORTHO05D003856 3.9e-39 165.2 127 59.1
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 7.7e-27 124.4 131 48.1
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 1.0e-23 114.0 134 44.0
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 2.3e-23 112.8 112 45.5
TPR.G1395 Trifolium pratense HOM05D002733 ORTHO05D003856 1.4e-20 103.6 113 45.1
TPR.G8024 Trifolium pratense HOM05D002733 ORTHO05D003856 5.9e-19 98.2 113 44.2
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 1.0e-18 97.4 151 33.8
TPR.G12039 Trifolium pratense HOM05D002733 ORTHO05D003856 1.0e-18 97.4 114 43.0
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 1.3e-18 97.1 131 35.9
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 1.7e-18 96.7 120 40.0
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 2.9e-18 95.9 106 43.4
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 3.8e-18 95.5 114 43.9
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 3.8e-18 95.5 114 43.0
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 5.0e-18 95.1 114 43.9
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 6.5e-18 94.7 114 43.9
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 8.6e-18 94.4 132 37.1
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 8.6e-18 94.4 123 41.5
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 1.1e-17 94.0 114 43.0
Cfa009897 Carpinus fangiana HOM05D002733 ORTHO05D003856 1.5e-17 93.6 132 36.4
Sed0017653 Sechium edule HOM05D002733 ORTHO05D003856 1.5e-17 93.6 124 37.1
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 2.5e-17 92.8 112 38.4
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 5.5e-17 91.7 125 38.4
Solyc12g007300.1 Solanum lycopersicum HOM05D002733 ORTHO05D003856 5.5e-17 91.7 123 40.7
Sopen12g003260 Solanum pennellii HOM05D002733 ORTHO05D003856 5.5e-17 91.7 123 40.7
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 9.5e-17 90.9 124 36.3
Sabra16G0260100 Salix brachista HOM05D002733 ORTHO05D003856 1.6e-16 90.1 112 37.5
RcHm_v2.0_Chr2g0120751 Rosa chinensis HOM05D002733 ORTHO05D003856 2.8e-16 89.4 132 34.1
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 3.6e-16 89.0 141 34.0
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 4.0e-15 85.5 154 32.5
FvH4_1g24261 Fragaria vesca HOM05D002733 ORTHO05D003856 5.2e-15 85.1 132 32.6
FAN26G1179 Fragaria x ananassa HOM05D002733 ORTHO05D003856 5.2e-15 85.1 132 32.6
Nitab4.5_0000316g0140 Nicotiana tabacum HOM05D002733 ORTHO05D003856 5.2e-15 85.1 127 37.0
Peaxi162Scf00023g00136 Petunia axillaris HOM05D002733 ORTHO05D003856 6.8e-15 84.7 127 37.0
Prupe.7G223800 Prunus persica HOM05D002733 ORTHO05D003856 1.2e-14 84.0 154 33.1
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.5e-14 83.6 133 33.1
Haze_00196 Corylus avellana HOM05D002733 ORTHO05D003856 1.5e-14 83.6 155 31.6
FAN28G1642 Fragaria x ananassa HOM05D000949 ORTHO05D001276 1.5e-14 83.6 156 29.5
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.0e-14 83.2 156 28.8
Nitab4.5_0001888g0040 Nicotiana tabacum HOM05D002733 ORTHO05D003856 2.0e-14 83.2 127 37.0
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 2.6e-14 82.8 133 34.6
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 2.6e-14 82.8 112 36.6
Eucgr.L02178 Eucalyptus grandis HOM05D002733 ORTHO05D003856 3.4e-14 82.4 105 36.2
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 3.4e-14 82.4 113 38.9
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 5.7e-14 81.6 113 38.9
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 1.3e-13 80.5 125 31.2
FvH4_5g06160 Fragaria vesca HOM05D002733 ORTHO05D003856 1.7e-13 80.1 138 31.9
FAN13G0375 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.7e-13 80.1 138 31.9
AT4G03170 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 2.2e-13 79.7 111 40.5
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 2.2e-13 79.7 103 38.8
FAN23G1485 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.2e-13 79.7 143 30.1
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 2.8e-13 79.3 107 36.4
CiPaw.03G015000 Carya illinoinensis HOM05D002733 ORTHO05D003856 4.9e-13 78.6 136 30.9
Cpa.g.sc81.85 Carica papaya HOM05D002733 ORTHO05D003856 6.3e-13 78.2 120 35.8
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 6.3e-13 78.2 109 35.8
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 8.3e-13 77.8 120 35.8
FAN19G2118 Fragaria x ananassa HOM05D002733 ORTHO05D003856 8.3e-13 77.8 144 29.9
CiPaw.03G015300 Carya illinoinensis HOM05D002733 ORTHO05D003856 1.4e-12 77.0 136 30.9
FAN18G0094 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.4e-12 77.0 138 31.2
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 1.4e-12 77.0 120 35.0
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 3.1e-12 75.9 109 34.9
Aqoxy1G01499 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 4.1e-12 75.5 106 37.7
TPR.G22027 Trifolium pratense HOM05D002733 ORTHO05D003856 4.1e-12 75.5 72 44.4
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 7.0e-12 74.7 120 33.3
Cfa016245 Carpinus fangiana HOM05D002733 ORTHO05D003856 9.2e-12 74.3 106 34.9
Sp4g22050 Schrenkiella parvula HOM05D002733 ORTHO05D003856 9.2e-12 74.3 133 31.6
Sp4g22450 Schrenkiella parvula HOM05D002733 ORTHO05D003856 9.2e-12 74.3 147 34.0
Sp5g18240 Schrenkiella parvula HOM05D002733 ORTHO05D003856 9.2e-12 74.3 147 34.0
BcaB02g09048 Brassica carinata HOM05D002733 ORTHO05D003856 1.2e-11 73.9 159 34.0
Prupe.7G224000 Prunus persica HOM05D002733 ORTHO05D003856 1.2e-11 73.9 125 34.4
DCAR_003269 Daucus carota HOM05D002733 ORTHO05D003856 1.6e-11 73.6 114 41.2
Cfa016244 Carpinus fangiana HOM05D002733 ORTHO05D003856 2.0e-11 73.2 133 33.1
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 2.7e-11 72.8 111 37.8
Haze_00197 Corylus avellana HOM05D002733 ORTHO05D003856 2.7e-11 72.8 125 36.0
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 2.7e-11 72.8 106 33.0
CiPaw.03G014800 Carya illinoinensis HOM05D002733 ORTHO05D003856 3.5e-11 72.4 138 31.2
COL.COLO4_32232 Corchorus olitorius HOM05D002733 ORTHO05D003856 4.5e-11 72.0 125 35.2
Sed0027145 Sechium edule HOM05D002733 ORTHO05D003856 4.5e-11 72.0 106 35.8
DCAR_003268 Daucus carota HOM05D002733 ORTHO05D003856 5.9e-11 71.6 114 38.6
FvH4_1g16231 Fragaria vesca HOM05D002733 ORTHO05D003856 5.9e-11 71.6 148 29.1
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 5.9e-11 71.6 112 33.0
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 7.8e-11 71.2 112 33.0
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 7.8e-11 71.2 112 33.0
AL7G49890 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 2.9e-10 69.3 111 36.9
BcaB06g29131 Brassica carinata HOM05D002733 ORTHO05D003856 3.8e-10 68.9 111 35.1
DCAR_028226 Daucus carota HOM05D002733 ORTHO05D003856 3.8e-10 68.9 111 34.2
Eucgr.C01014 Eucalyptus grandis HOM05D002733 ORTHO05D003856 3.8e-10 68.9 158 27.8
BolC3t15022H Brassica oleracea HOM05D002733 ORTHO05D003856 5.0e-10 68.6 113 32.7
Carub.0004s2232 Capsella rubella HOM05D002733 ORTHO05D003856 5.0e-10 68.6 122 32.8
A04p30010 Brassica napus HOM05D002733 ORTHO05D003856 6.6e-10 68.2 111 36.0
BraA04t18506Z Brassica rapa HOM05D002733 ORTHO05D003856 6.6e-10 68.2 111 36.0
Carub.0003s2754 Capsella rubella HOM05D002733 ORTHO05D003856 1.5e-09 67.0 126 32.5
BraA03t11459Z Brassica rapa HOM05D002733 ORTHO05D003856 1.9e-09 66.6 113 31.9
MD02G1060300 Malus domestica HOM05D002733 ORTHO05D003856 2.5e-09 66.2 107 34.6
BcaC02g07356 Brassica carinata HOM05D002733 ORTHO05D003856 3.3e-09 65.9 111 36.0
A03p22270 Brassica napus HOM05D002733 ORTHO05D003856 4.3e-09 65.5 113 31.9
C03p26370 Brassica napus HOM05D002733 ORTHO05D003856 4.3e-09 65.5 110 33.6
BolC4t28286H Brassica oleracea HOM05D002733 ORTHO05D003856 4.3e-09 65.5 111 36.0
Rhsim05G0042200 Rhododendron simsii HOM05D002733 ORTHO05D003856 4.3e-09 65.5 123 30.9
Prupe.7G224100 Prunus persica HOM05D002733 ORTHO05D003856 2.1e-08 63.2 130 25.4
Thhalv10017517m.g Eutrema salsugineum HOM05D002733 ORTHO05D003856 6.1e-08 61.6 124 32.3
Aa31LG8G17140 Aethionema arabicum HOM05D002733 ORTHO05D003856 8.0e-08 61.2 117 31.6
Aa31LG8G17220 Aethionema arabicum HOM05D002733 ORTHO05D003856 8.0e-08 61.2 152 28.3
PSO566G0305 Papaver somniferum HOM05D002733 ORTHO05D003856 8.0e-08 61.2 103 30.1
Aa31LG7G1550 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.0e-07 60.8 118 32.2
Aa31LG8G17210 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.0e-07 60.8 113 31.9
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 1.4e-07 60.5 118 32.2
Aa31LG7G1600 Aethionema arabicum HOM05D002733 ORTHO05D003856 5.2e-07 58.5 105 34.3
Actinidia09441 Actinidia chinensis HOM05D002733 ORTHO05D003856 6.8e-07 58.2 122 28.7
AL4G37790 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 8.9e-07 57.8 114 30.7
Sabra08G0161200 Salix brachista HOM05D002733 ORTHO05D003856 8.9e-07 57.8 97 34.0
BcaC02g12127 Brassica carinata HOM05D002733 ORTHO05D003856 2.0e-06 56.6 155 27.7
C04p07280 Brassica napus HOM05D002733 ORTHO05D003856 2.0e-06 56.6 155 27.7
BolC4t22351H Brassica oleracea HOM05D002733 ORTHO05D003856 2.0e-06 56.6 155 27.7
Aqoxy2G03580 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 2.6e-06 56.2 73 37.0
A05p06330 Brassica napus HOM05D002733 ORTHO05D003856 2.6e-06 56.2 155 27.7
BraA05t19601Z Brassica rapa HOM05D002733 ORTHO05D003856 3.4e-06 55.8 155 29.7
BcaC01g05431 Brassica carinata HOM05D002733 ORTHO05D003856 5.8e-06 55.1 110 30.0
C03p26740 Brassica napus HOM05D002733 ORTHO05D003856 5.8e-06 55.1 110 30.0
BolC3t15059H Brassica oleracea HOM05D002733 ORTHO05D003856 5.8e-06 55.1 110 30.0
AT1G20600 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 7.5e-06 54.7 100 34.0


User provided reference genes

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