Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G024800 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 8.1e-70 266.9 132 100.0
VMungo1080G0254 Vigna mungo HOM05D002974 ORTHO05D002992 1.0e-40 170.2 135 73.3
Glyma.04G134200 Glycine max HOM05D002974 ORTHO05D002992 3.2e-34 148.7 129 69.0
Lj3g0008937 Lotus japonicus HOM05D002974 ORTHO05D002992 1.7e-27 126.3 134 60.4
Medtr3g013980 Medicago truncatula HOM05D002974 ORTHO05D002992 9.4e-26 120.6 137 59.9
Ca_12961_v3 Cicer arietinum L. HOM05D002974 ORTHO05D002992 8.8e-24 114.0 135 57.8
TPR.G31150 Trifolium pratense HOM05D002974 ORTHO05D002992 4.4e-23 111.7 136 56.6
Psat5g220360 Pisum sativum HOM05D002974 ORTHO05D002992 7.4e-23 110.9 135 54.1
Medtr8g040080 Medicago truncatula HOM05D002974 ORTHO05D002992 1.0e-16 90.5 120 49.2
TPR.G22516 Trifolium pratense HOM05D002974 ORTHO05D002992 1.0e-16 90.5 121 48.8
Lalb_Chr21g0315251 Lupinus albus HOM05D002974 ORTHO05D002992 1.8e-16 89.7 132 48.5
Glyma.13G193800 Glycine max HOM05D002974 ORTHO05D002992 1.7e-14 83.2 132 44.7
Lalb_Chr19g0133001 Lupinus albus HOM05D002974 ORTHO05D002992 2.2e-14 82.8 125 52.0
Glyma.15G232200 Glycine max HOM05D002974 ORTHO05D002992 2.8e-14 82.4 132 43.9
Lj3g0024515 Lotus japonicus HOM05D002974 ORTHO05D002992 1.2e-12 77.0 125 43.2
Phvul.011G203450 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 2.6e-12 75.9 122 44.3
Psat4g145360 Pisum sativum HOM05D002974 ORTHO05D002992 3.8e-11 72.0 51 78.4
Gorai.012G018900 Gossypium raimondii HOM05D002974 ORTHO05D002992 4.2e-10 68.6 120 44.2
Manes.11G007000 Manihot esculenta HOM05D002974 ORTHO05D002992 4.2e-10 68.6 119 44.5
Gohir.D04G016200 Gossypium hirsutum HOM05D002974 ORTHO05D002992 7.2e-10 67.8 66 60.6
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 1.2e-09 67.0 132 38.6
Oeu006786.1 Olea europaea HOM05D002974 ORTHO05D002992 8.0e-09 64.3 119 42.0
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 8.0e-09 64.3 141 41.1
Sabra03G0145400 Salix brachista HOM05D002974 ORTHO05D002992 8.0e-09 64.3 140 39.3
Gohir.A10G187100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.4e-08 63.5 126 36.5
QL04p017813 Quercus lobata HOM05D002974 ORTHO05D002992 1.4e-08 63.5 125 39.2
QL04p018674 Quercus lobata HOM05D002974 ORTHO05D002992 1.4e-08 63.5 125 39.2
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 1.8e-08 63.2 71 50.7
CiPaw.13G015100 Carya illinoinensis HOM05D002974 ORTHO05D002992 1.8e-08 63.2 120 42.5
Gohir.A05G399600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.8e-08 63.2 66 57.6
Gorai.011G217100 Gossypium raimondii HOM05D002974 ORTHO05D002992 1.8e-08 63.2 129 38.8
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 1.8e-08 63.2 73 49.3
MSTRG.28034 Avicennia marina HOM05D002974 ORTHO05D002992 3.0e-08 62.4 109 38.5
FAN03G0828 Fragaria x ananassa HOM05D002974 ORTHO05D002992 4.0e-08 62.0 88 48.9
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 4.0e-08 62.0 67 59.7
Thecc.10G149600 Theobroma cacao HOM05D002974 ORTHO05D002992 4.0e-08 62.0 55 63.6
CiPaw.14G008700 Carya illinoinensis HOM05D002974 ORTHO05D002992 5.2e-08 61.6 86 48.8
Gohir.D10G194600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 5.2e-08 61.6 129 38.8
Oeu053079.1 Olea europaea HOM05D002974 ORTHO05D002992 5.2e-08 61.6 131 40.5
Rhsim07G0068200 Rhododendron simsii HOM05D002974 ORTHO05D002992 5.2e-08 61.6 102 44.1
CAN.G134.10 Capsicum annuum HOM05D002974 ORTHO05D002992 6.7e-08 61.2 60 61.7
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 6.7e-08 61.2 138 37.0
Duzib106G1811 Durio zibethinus HOM05D002974 ORTHO05D002992 6.7e-08 61.2 71 52.1
Duzib114G0524 Durio zibethinus HOM05D002974 ORTHO05D002992 6.7e-08 61.2 55 61.8
FAN01G3097 Fragaria x ananassa HOM05D002974 ORTHO05D002992 6.7e-08 61.2 66 59.1
Oeu011571.1 Olea europaea HOM05D002974 ORTHO05D002992 6.7e-08 61.2 119 39.5
THA.LOC109116532 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 6.7e-08 61.2 49 61.2
Cfa010941 Carpinus fangiana HOM05D002974 ORTHO05D002992 8.8e-08 60.8 66 54.5
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 8.8e-08 60.8 45 64.4
FAN10G2850 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.2e-07 60.5 66 57.6
CANSAT56G2792 Cannabis sativa HOM05D002974 ORTHO05D002992 1.5e-07 60.1 66 59.1
COL.COLO4_20695 Corchorus olitorius HOM05D003550 ORTHO05D004336 1.5e-07 60.1 66 56.1
FvH4_7g03520 Fragaria vesca HOM05D002974 ORTHO05D002992 2.0e-07 59.7 67 59.7
FAN06G3677 Fragaria x ananassa HOM05D002974 ORTHO05D002992 2.0e-07 59.7 67 59.7
Prupe.7G038200 Prunus persica HOM05D002974 ORTHO05D002992 2.0e-07 59.7 57 50.9
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 2.6e-07 59.3 117 38.5
Duzib128G1163 Durio zibethinus HOM05D002974 ORTHO05D002992 2.6e-07 59.3 65 53.8
PGR031G0048 Punica granatum HOM05D002974 ORTHO05D002992 2.6e-07 59.3 140 39.3
FAN09G2803 Fragaria x ananassa HOM05D002974 ORTHO05D002992 3.3e-07 58.9 85 41.2
RcHm_v2.0_Chr1g0325821 Rosa chinensis HOM05D002974 ORTHO05D002992 3.3e-07 58.9 67 59.7
FvH4_6g25410 Fragaria vesca HOM05D002974 ORTHO05D002992 4.4e-07 58.5 85 41.2
FAN05G2143 Fragaria x ananassa HOM05D002974 ORTHO05D002992 4.4e-07 58.5 85 41.2
SGA_v2.0_scaffold232G43495 Striga asiatica HOM05D002974 ORTHO05D002992 4.4e-07 58.5 117 36.8
MELO3C012484.2 Cucumis melo HOM05D002974 ORTHO05D002992 5.7e-07 58.2 52 65.4
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 5.7e-07 58.2 64 50.0
Atru.chr12.1277 Acer truncatum HOM05D002974 ORTHO05D002992 9.7e-07 57.4 41 73.2
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 9.7e-07 57.4 67 50.7
Sed0006618 Sechium edule HOM05D002974 ORTHO05D002992 9.7e-07 57.4 56 64.3
Migut.N01854 Erythranthe guttata HOM05D002974 ORTHO05D002992 1.3e-06 57.0 59 52.5
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 1.3e-06 57.0 51 56.9
Potri.016G036600 Populus trichocarpa HOM05D002974 ORTHO05D002992 1.3e-06 57.0 89 41.6
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 1.7e-06 56.6 52 59.6
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 1.7e-06 56.6 71 52.1
FAN02G0528 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.7e-06 56.6 85 38.8
Gohir.A11G307100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.7e-06 56.6 86 43.0
PGSC0003DMG400005401 Solanum tuberosum HOM05D002974 ORTHO05D002992 1.7e-06 56.6 55 60.0
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 2.2e-06 56.2 51 58.8
Migut.B01240 Erythranthe guttata HOM05D002974 ORTHO05D002992 2.2e-06 56.2 138 35.5
Nitab4.5_0005808g0010 Nicotiana tabacum HOM05D002974 ORTHO05D002992 2.2e-06 56.2 74 47.3
Oeu064130.1 Olea europaea HOM05D002974 ORTHO05D002992 2.2e-06 56.2 62 53.2
Potri.006G038900 Populus trichocarpa HOM05D002974 ORTHO05D002992 2.2e-06 56.2 78 44.9
Sc10g0004500 Simmondsia chinensis HOM05D002974 ORTHO05D002992 2.2e-06 56.2 93 40.9
Sc11g0006360 Simmondsia chinensis HOM05D002974 ORTHO05D002992 2.2e-06 56.2 76 44.7
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 2.8e-06 55.8 69 53.6
Nitab4.5_0003481g0110 Nicotiana tabacum HOM05D002974 ORTHO05D002992 2.8e-06 55.8 101 38.6
Solyc01g096510.2 Solanum lycopersicum HOM05D002974 ORTHO05D002992 2.8e-06 55.8 134 33.6
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 2.8e-06 55.8 97 41.2
TAR633G1036 Trochodendron aralioides HOM05D002974 ORTHO05D002992 2.8e-06 55.8 39 74.4
ClCG05G026910 Citrullus lanatus HOM05D002974 ORTHO05D002992 3.7e-06 55.5 52 61.5
CsaV3_5G036860 Cucumis sativus L. HOM05D002974 ORTHO05D002992 3.7e-06 55.5 60 58.3
Sopen01g040240 Solanum pennellii HOM05D002974 ORTHO05D002992 3.7e-06 55.5 124 35.5
TWI53G1119 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 3.7e-06 55.5 74 43.2
MSTRG.5073 Avicennia marina HOM05D002974 ORTHO05D002992 4.8e-06 55.1 111 35.1
CSS0001226 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 4.8e-06 55.1 49 57.1
CSS0032574 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 4.8e-06 55.1 49 57.1
CDE08G1203 Ceratophyllum demersum HOM05D002974 ORTHO05D002992 4.8e-06 55.1 84 38.1
Peaxi162Scf00082g00006 Petunia axillaris HOM05D002974 ORTHO05D002992 4.8e-06 55.1 46 60.9
Thecc.05G134100 Theobroma cacao HOM05D002974 ORTHO05D002992 4.8e-06 55.1 82 46.3
unitig_26.g9507 Utricularia gibba HOM05D002974 ORTHO05D002992 4.8e-06 55.1 68 48.5
DCAR_013643 Daucus carota HOM05D002974 ORTHO05D002992 6.3e-06 54.7 118 37.3
Lj1g0016303 Lotus japonicus HOM05D002974 ORTHO05D002992 6.3e-06 54.7 76 46.1
QL04p017793 Quercus lobata HOM05D002974 ORTHO05D002992 6.3e-06 54.7 102 39.2
Sed0000723 Sechium edule HOM05D002974 ORTHO05D002992 6.3e-06 54.7 52 61.5
SGA_v2.0_scaffold43G16289 Striga asiatica HOM05D002974 ORTHO05D002992 8.2e-06 54.3 67 49.3


User provided reference genes

Program Settings