Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 2.8e-213 745.0 371 100.0
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 1.0e-194 683.3 371 90.3
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 3.4e-182 641.7 379 83.4
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 2.3e-178 629.0 380 82.4
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 2.8e-152 542.3 383 70.2
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 1.3e-149 533.5 375 71.2
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 2.1e-147 526.2 382 70.2
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 1.3e-146 523.5 383 68.7
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 2.3e-146 522.7 382 68.6
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 8.7e-146 520.8 377 68.2
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 1.5e-145 520.0 377 67.9
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 1.5e-145 520.0 375 69.3
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 2.5e-145 519.2 382 69.1
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 3.3e-145 518.8 376 68.9
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 3.3e-145 518.8 377 70.6
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 7.4e-145 517.7 379 68.6
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 2.2e-144 516.2 383 69.5
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 3.7e-144 515.4 372 68.8
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.7e-144 515.4 372 68.8
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 1.1e-143 513.8 381 68.0
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 1.4e-143 513.5 380 69.5
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 1.4e-143 513.5 380 69.5
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.8e-143 513.1 378 68.0
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.8e-143 513.1 378 68.0
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 4.1e-143 511.9 378 69.0
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 4.1e-143 511.9 379 68.3
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 6.9e-143 511.1 389 67.4
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 2.0e-142 509.6 389 67.9
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.6e-142 509.2 374 68.2
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 4.5e-142 508.4 378 69.0
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 4.5e-142 508.4 374 68.2
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 5.9e-142 508.1 374 68.2
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 5.9e-142 508.1 383 68.1
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 1.3e-141 506.9 381 68.0
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 2.2e-141 506.1 390 66.9
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 2.2e-141 506.1 379 67.8
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 1.9e-140 503.1 384 67.2
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 4.2e-140 501.9 384 67.7
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 5.5e-140 501.5 389 66.6
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 7.2e-140 501.1 385 66.2
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 7.2e-140 501.1 388 66.8
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 1.2e-139 500.4 386 66.1
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 1.2e-139 500.4 384 66.9
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 2.1e-139 499.6 380 67.1
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 4.6e-139 498.4 388 64.9
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 6.1e-139 498.0 385 65.5
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 1.0e-138 497.3 380 67.4
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 1.8e-138 496.5 393 65.9
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 2.3e-138 496.1 377 67.4
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 5.1e-138 495.0 376 67.8
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 6.7e-138 494.6 381 67.7
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 6.7e-138 494.6 383 65.8
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 1.1e-137 493.8 382 65.4
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 3.3e-137 492.3 382 65.2
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 9.7e-137 490.7 399 63.7
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 1.3e-136 490.3 385 65.7
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 2.2e-136 489.6 378 65.9
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 2.8e-136 489.2 379 65.2
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 4.8e-136 488.4 377 66.8
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 4.8e-136 488.4 390 65.1
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 6.3e-136 488.0 381 66.7
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 1.8e-135 486.5 382 65.4
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 1.8e-135 486.5 331 71.6
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 1.5e-134 483.4 331 71.0
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 2.6e-134 482.6 376 65.2
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 4.5e-134 481.9 379 66.0
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 1.3e-133 480.3 383 64.2
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 2.2e-133 479.6 378 65.3
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 2.9e-133 479.2 384 64.1
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 3.8e-133 478.8 388 63.9
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 5.0e-133 478.4 384 63.8
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 6.5e-133 478.0 378 65.3
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 1.1e-132 477.2 379 63.3
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 4.2e-132 475.3 378 64.6
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 4.2e-132 475.3 303 75.2
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.2e-131 473.8 379 64.6
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 2.1e-131 473.0 394 63.7
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 2.1e-131 473.0 427 59.5
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 3.0e-130 469.2 456 56.8
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 8.8e-130 467.6 299 75.3
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 1.7e-128 463.4 378 62.2
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 7.0e-127 458.0 333 65.5
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 7.7e-126 454.5 283 74.9
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 1.3e-125 453.8 378 63.0
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 2.9e-125 452.6 296 73.6
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.1e-124 450.7 386 61.7
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 7.2e-124 448.0 381 60.6
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 6.7e-122 441.4 491 51.7
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 4.4e-121 438.7 424 56.4
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.7e-120 436.8 386 59.6
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 2.8e-120 436.0 284 72.2
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 6.3e-120 434.9 386 59.6
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 1.7e-117 426.8 381 59.8
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 3.8e-117 425.6 386 58.5
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 2.7e-115 419.5 306 65.7
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 2.2e-109 399.8 352 58.2
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 8.5e-109 397.9 378 59.5
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 4.1e-103 379.0 317 62.8
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 6.8e-98 361.7 296 59.1
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 1.3e-96 357.5 293 58.4
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 3.5e-94 349.4 327 52.9
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 3.6e-91 339.3 293 55.3
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 3.4e-89 332.8 244 65.2
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 2.9e-88 329.7 223 67.3
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 4.1e-87 325.9 228 68.9
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 9.5e-84 314.7 213 72.3
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 4.4e-81 305.8 213 68.5
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 4.4e-81 305.8 213 68.5
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 4.4e-81 305.8 213 68.5
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 7.8e-78 295.0 289 46.7
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 4.9e-72 275.8 290 53.8
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 3.5e-70 269.6 230 62.2
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 1.1e-66 258.1 304 43.1
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 2.6e-65 253.4 285 44.6
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 6.6e-61 238.8 279 44.8
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 2.0e-57 227.3 178 66.3
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 4.5e-57 226.1 157 70.1
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 4.2e-47 193.0 151 68.2
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 3.7e-43 179.9 164 58.5
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 8.7e-37 158.7 111 64.0
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 6.3e-35 152.5 161 49.1
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 6.5e-32 142.5 95 69.5
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.9e-31 141.0 170 47.6
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 1.1e-28 131.7 105 61.0
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 3.8e-24 116.7 64 81.2
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 3.6e-22 110.2 97 56.7
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 9.4e-15 85.5 102 48.0
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 5.7e-12 76.3 47 74.5
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 5.7e-12 76.3 47 74.5
TAR628G1549 Trochodendron aralioides HOM05D006111 ORTHO05D414729 1.2e-06 58.5 41 65.9
Medtr5g055880 Medicago truncatula HOM05D007086 ORTHO05D008927 4.7e-06 56.6 43 55.8


User provided reference genes

Program Settings