Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G023800 Phaseolus vulgaris HOM05D007776 ORTHO05D009812 3.9e-86 321.6 184 100.0
VMungo1080G1686 Vigna mungo HOM05D007776 ORTHO05D009812 6.4e-65 251.1 185 75.1
Ca_14480_v3 Cicer arietinum L. HOM05D007776 ORTHO05D009812 3.9e-38 162.2 161 58.4
Medtr0045s0130 Medicago truncatula HOM05D007776 ORTHO05D009812 2.5e-32 142.9 151 57.0
Lalb_Chr25g0282901 Lupinus albus HOM05D007776 ORTHO05D009812 3.2e-32 142.5 196 49.5
Glyma.10G090400 Glycine max HOM05D007776 ORTHO05D009812 7.9e-31 137.9 193 56.0
TPR.G27845 Trifolium pratense HOM05D000479 ORTHO05D009812 1.6e-28 130.2 159 47.8
Psat5g210040 Pisum sativum HOM05D007776 ORTHO05D009812 3.7e-28 129.0 206 44.7
Lj3g0020626 Lotus japonicus HOM05D007776 ORTHO05D009812 1.0e-22 110.9 172 52.3
Glyma.15G276200 Glycine max HOM05D007776 ORTHO05D009812 1.7e-20 103.6 149 51.0
Sed0008767 Sechium edule HOM05D007776 ORTHO05D009812 2.8e-20 102.8 109 56.0
CiPaw.07G236300 Carya illinoinensis HOM05D007776 ORTHO05D009812 3.7e-20 102.4 140 47.1
Prupe.1G555000 Prunus persica HOM05D007776 ORTHO05D009812 6.3e-20 101.7 110 50.9
CANSAT25G0596 Cannabis sativa HOM05D007776 ORTHO05D009812 1.1e-19 100.9 114 54.4
Manes.02G198100 Manihot esculenta HOM05D007776 ORTHO05D009812 9.1e-19 97.8 142 43.0
MD15G1406800 Malus domestica HOM05D007776 ORTHO05D009812 1.2e-18 97.4 116 49.1
CiPaw.05G123100 Carya illinoinensis HOM05D007776 ORTHO05D009812 3.4e-18 95.9 103 52.4
RcHm_v2.0_Chr7g0227891 Rosa chinensis HOM05D007776 ORTHO05D009812 4.5e-18 95.5 105 54.3
TWI14G0313 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 7.7e-18 94.7 156 44.9
FAN08G2421 Fragaria x ananassa HOM05D007776 ORTHO05D009812 8.5e-17 91.3 138 43.5
FAN04G1877 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.1e-16 90.9 104 52.9
Haze_21304 Corylus avellana HOM05D007776 ORTHO05D009812 2.5e-16 89.7 143 44.8
Potri.013G107300 Populus trichocarpa HOM05D007776 ORTHO05D009812 3.2e-16 89.4 103 54.4
Sabra19G0091100 Salix brachista HOM05D007776 ORTHO05D009812 3.2e-16 89.4 102 52.9
FvH4_5g31870 Fragaria vesca HOM05D007776 ORTHO05D009812 9.4e-16 87.8 105 52.4
Cfa012949 Carpinus fangiana HOM05D007776 ORTHO05D009812 1.6e-15 87.0 139 45.3
FAN04G0521 Fragaria x ananassa HOM05D007776 ORTHO05D009812 2.1e-15 86.7 104 51.0
FAN18G1270 Fragaria x ananassa HOM05D007776 ORTHO05D009812 2.1e-15 86.7 98 55.1
TWI59G0674 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 1.4e-14 84.0 98 52.0
Gohir.D05G288000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 6.7e-14 81.6 146 42.5
Gorai.009G303100 Gossypium raimondii HOM05D007776 ORTHO05D009812 6.7e-14 81.6 146 42.5
AT1G35430 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 1.5e-13 80.5 100 48.0
Ciclev10002690m.g Citrus clementina HOM05D007776 ORTHO05D009812 1.5e-13 80.5 101 47.5
Nn5g27525 Nelumbo nucifera HOM05D007776 ORTHO05D009812 1.5e-13 80.5 105 47.6
Potri.019G079800 Populus trichocarpa HOM05D007776 ORTHO05D009812 1.5e-13 80.5 111 48.6
Sabra13G0092600 Salix brachista HOM05D007776 ORTHO05D009812 3.3e-13 79.3 102 49.0
AL1G50270 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 9.7e-13 77.8 100 46.0
Carub.0001s3303 Capsella rubella HOM05D007776 ORTHO05D009812 9.7e-13 77.8 103 45.6
Duzib177G0943 Durio zibethinus HOM05D007776 ORTHO05D009812 1.7e-12 77.0 100 49.0
THA.LOC104806792 Tarenaya hassleriana HOM05D007776 ORTHO05D009812 2.2e-12 76.6 113 43.4
Sp1g30150 Schrenkiella parvula HOM05D007776 ORTHO05D009812 2.8e-12 76.3 96 47.9
CARHR034200 Cardamine hirsuta HOM05D007776 ORTHO05D009812 4.8e-12 75.5 98 48.0
Gohir.A05G287000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 8.2e-12 74.7 151 39.7
BraA09t38716Z Brassica rapa HOM05D007776 ORTHO05D009812 1.4e-11 73.9 98 46.9
ClCG11G008540 Citrullus lanatus HOM05D007776 ORTHO05D009812 1.4e-11 73.9 112 44.6
PGR042G2621 Punica granatum HOM05D007776 ORTHO05D009812 1.8e-11 73.6 107 48.6
Aa31LG6G8730 Aethionema arabicum HOM05D007776 ORTHO05D009812 2.4e-11 73.2 104 46.2
A09p31800 Brassica napus HOM05D007776 ORTHO05D009812 3.1e-11 72.8 98 46.9
BcaC08g43737 Brassica carinata HOM05D007776 ORTHO05D009812 4.1e-11 72.4 98 45.9
C06p11140 Brassica napus HOM05D007776 ORTHO05D009812 4.1e-11 72.4 98 45.9
BolC6t36249H Brassica oleracea HOM05D007776 ORTHO05D009812 4.1e-11 72.4 98 45.9
Dinv41753 Davidia involucrata HOM05D000238 ORTHO05D002999 4.1e-11 72.4 98 46.9
PGSC0003DMG400006837 Solanum tuberosum HOM05D007776 ORTHO05D009812 2.0e-10 70.1 141 38.3
QL02p026198 Quercus lobata HOM05D007776 ORTHO05D009812 7.7e-10 68.2 149 38.3
MD08G1218400 Malus domestica HOM05D007776 ORTHO05D009812 1.3e-09 67.4 77 50.6
Duzib116G0238 Durio zibethinus HOM05D007776 ORTHO05D009812 1.9e-08 63.5 98 41.8
Solyc01g087860.2 Solanum lycopersicum HOM05D007776 ORTHO05D009812 1.9e-08 63.5 135 38.5
CARHR260240 Cardamine hirsuta HOM05D007776 ORTHO05D009812 2.5e-08 63.2 107 42.1
A03p28480 Brassica napus HOM05D007776 ORTHO05D009812 3.2e-08 62.8 109 40.4
BraA03t12053Z Brassica rapa HOM05D007776 ORTHO05D009812 3.2e-08 62.8 109 40.4
AL6G42920 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 4.2e-08 62.4 113 40.7
Cpa.g.sc507.3 Carica papaya HOM05D007776 ORTHO05D009812 5.5e-08 62.0 118 37.3
BcaB01g02801 Brassica carinata HOM05D007776 ORTHO05D009812 7.2e-08 61.6 110 40.0
Thhalv10029064m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 7.2e-08 61.6 119 41.2
Sopen01g034790 Solanum pennellii HOM05D007776 ORTHO05D009812 1.2e-07 60.8 102 46.1
CSS0049282 Camellia sinensis var. sinensis HOM05D007776 ORTHO05D009812 1.6e-07 60.5 87 46.0
Thecc.08G190700 Theobroma cacao HOM05D007776 ORTHO05D009812 3.6e-07 59.3 149 33.6
BcaC01g04727 Brassica carinata HOM05D007776 ORTHO05D009812 4.7e-07 58.9 99 41.4
Sp6g08370 Schrenkiella parvula HOM05D007776 ORTHO05D009812 6.1e-07 58.5 103 39.8
Thhalv10001838m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 1.0e-06 57.8 97 41.2
C03p34420 Brassica napus HOM05D007776 ORTHO05D009812 1.4e-06 57.4 97 43.3
BolC3t15751H Brassica oleracea HOM05D007776 ORTHO05D009812 1.4e-06 57.4 97 43.3
AT4G09170 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 1.8e-06 57.0 114 38.6
Rhsim12G0006900 Rhododendron simsii HOM05D007776 ORTHO05D009812 3.0e-06 56.2 90 46.7


User provided reference genes

Program Settings