Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 1.6e-224 782.3 378 100.0
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 6.3e-192 674.1 376 85.9
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 1.1e-188 663.3 349 89.4
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 8.0e-179 630.6 378 79.6
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.2e-177 626.7 377 80.1
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 1.4e-175 619.8 376 79.5
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 3.1e-175 618.6 382 79.6
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 4.1e-175 618.2 375 80.5
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 1.3e-168 596.7 359 81.1
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 2.2e-168 595.9 359 81.3
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 4.4e-153 545.0 379 70.4
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 4.9e-152 541.6 370 71.6
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 4.6e-150 535.0 376 68.4
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.3e-149 533.5 373 69.4
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 4.3e-148 528.5 376 67.0
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 5.6e-148 528.1 376 67.0
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 7.3e-148 527.7 326 79.8
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 9.5e-148 527.3 377 69.2
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 1.6e-147 526.6 379 68.9
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 4.7e-147 525.0 379 67.5
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 1.1e-146 523.9 378 66.9
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.4e-146 523.5 378 68.0
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.8e-146 523.1 377 67.1
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 6.8e-146 521.2 373 68.1
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 8.9e-146 520.8 372 67.5
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 2.0e-145 519.6 416 63.2
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 2.0e-145 519.6 377 68.4
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 2.0e-145 519.6 372 68.0
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 2.0e-145 519.6 370 67.8
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 4.4e-145 518.5 377 68.4
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 2.7e-142 509.2 379 67.0
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 2.7e-142 509.2 369 68.0
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 2.7e-142 509.2 379 67.3
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 3.5e-142 508.8 373 66.5
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 7.8e-142 507.7 376 66.8
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 2.3e-141 506.1 370 68.6
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 8.6e-141 504.2 377 65.8
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.5e-140 503.4 369 66.9
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 5.6e-140 501.5 373 65.7
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 5.6e-140 501.5 373 65.7
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 9.5e-140 500.7 375 65.3
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.8e-138 496.5 375 64.5
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 2.3e-138 496.1 394 62.9
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 3.1e-138 495.7 375 64.8
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 8.9e-138 494.2 372 65.3
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 1.2e-137 493.8 372 65.9
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 5.8e-137 491.5 372 65.6
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 7.6e-137 491.1 372 65.6
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 2.2e-136 489.6 411 60.1
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 1.1e-135 487.3 372 63.2
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 1.4e-135 486.9 373 63.0
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 1.2e-134 483.8 365 64.9
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.2e-134 483.8 368 64.4
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.0e-133 480.7 376 63.8
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 1.7e-133 479.9 377 63.1
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 3.9e-133 478.8 351 65.5
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 5.1e-133 478.4 376 62.2
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.5e-132 476.9 351 66.7
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 1.9e-132 476.5 376 62.0
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 4.3e-132 475.3 378 60.3
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 4.3e-132 475.3 378 63.2
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 5.6e-132 474.9 379 60.7
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 1.2e-131 473.8 375 62.4
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 6.2e-131 471.5 376 61.2
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 1.4e-130 470.3 376 60.9
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 8.9e-130 467.6 380 59.7
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.2e-129 467.2 372 61.3
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 1.5e-129 466.8 377 61.0
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 1.5e-129 466.8 377 61.0
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 2.0e-129 466.5 373 63.0
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 4.4e-129 465.3 381 59.8
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 1.7e-128 463.4 366 61.7
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 3.8e-128 462.2 373 63.0
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 6.4e-128 461.5 369 62.9
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.1e-127 460.7 369 62.3
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 1.9e-127 459.9 381 58.5
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 2.4e-127 459.5 375 60.5
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 3.2e-127 459.1 352 62.2
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 3.2e-127 459.1 369 62.3
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 1.6e-126 456.8 376 59.0
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 1.6e-126 456.8 366 60.7
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 1.2e-121 440.7 261 83.1
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 1.9e-119 433.3 367 56.9
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 3.2e-119 432.6 374 58.0
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 4.6e-118 428.7 380 60.0
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 2.1e-115 419.9 324 63.3
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.1e-114 417.5 368 57.3
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.1e-114 417.5 298 68.5
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 2.0e-113 413.3 381 54.1
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 1.7e-112 410.2 225 88.0
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 3.8e-112 409.1 367 56.4
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 4.9e-112 408.7 381 56.7
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 2.7e-110 402.9 368 53.0
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 2.3e-109 399.8 298 66.4
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 2.3e-109 399.8 275 71.6
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 1.1e-108 397.5 358 57.3
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 1.1e-108 397.5 382 53.9
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 1.1e-108 397.5 374 56.1
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 1.6e-107 393.7 285 68.4
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 2.1e-107 393.3 368 54.6
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 8.4e-104 381.3 398 50.8
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 1.9e-103 380.2 386 52.6
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.3e-101 374.0 375 54.9
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 4.5e-97 359.0 394 50.8
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 2.3e-93 346.7 273 63.7
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 9.7e-92 341.3 279 60.6
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 2.0e-89 333.6 256 64.1
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 2.2e-88 330.1 372 47.8
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 2.7e-86 323.2 341 50.7
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 9.1e-82 308.1 385 42.3
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 1.1e-79 301.2 368 42.7
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 1.4e-79 300.8 365 43.3
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 1.6e-78 297.4 216 64.4
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 6.3e-67 258.8 386 36.3
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 7.0e-66 255.4 184 65.2
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 7.0e-58 228.8 188 59.0
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.2e-49 201.4 164 59.8
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 3.0e-45 186.8 119 71.4
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 3.5e-41 173.3 145 61.4
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 4.3e-31 139.8 127 56.7
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 9.5e-31 138.7 93 76.3
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.1e-29 135.2 209 42.1
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 6.9e-13 79.3 77 54.5
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 3.4e-12 77.0 45 73.3
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 1.9e-07 61.2 133 31.6


User provided reference genes

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